RNA–Protein interactions for RNA: ENST00000216106.5

HMGXB4-201, Transcript of HMG-box containing 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGXB4, Length 4,047 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-201ENST00000216106 TMEM147Q9BVK8 224 aa6.56□□□□□ -1.36
HMGXB4-201ENST00000216106 DYNLRB1Q9NP97 96 aa6.56□□□□□ -1.36
HMGXB4-201ENST00000216106 NGBQ9NPG2 151 aa6.56□□□□□ -1.36
HMGXB4-201ENST00000216106 PUS1Q9Y606 427 aaKnown RBP eCLIP6.56□□□□□ -1.36
HMGXB4-201ENST00000216106 CHD8Q9HCK8 2581 aa6.56□□□□□ -1.36
HMGXB4-201ENST00000216106 PPIAL4EA0A075B759 164 aa6.56□□□□□ -1.36
HMGXB4-201ENST00000216106 C7orf77A4D0Y5 90 aa6.56□□□□□ -1.36
HMGXB4-201ENST00000216106 C15orf62A8K5M9 175 aa6.56□□□□□ -1.36
HMGXB4-201ENST00000216106 PPIAL4DF5H284 164 aa6.56□□□□□ -1.36
HMGXB4-201ENST00000216106 TMEM178BH3BS89 294 aa6.56□□□□□ -1.36
HMGXB4-201ENST00000216106 ITGB1BP1O14713 200 aa6.56□□□□□ -1.36
HMGXB4-201ENST00000216106 PPIAL4FP0DN26 164 aa6.56□□□□□ -1.36
HMGXB4-201ENST00000216106 CCL3L1P16619 93 aa6.56□□□□□ -1.36
HMGXB4-201ENST00000216106 FGF7P21781 194 aa6.56□□□□□ -1.36
HMGXB4-201ENST00000216106 TMEM41BQ5BJD5 291 aa6.56□□□□□ -1.36
HMGXB4-201ENST00000216106 CYB561D1Q8N8Q1 229 aa6.56□□□□□ -1.36
HMGXB4-201ENST00000216106 ZNF383Q8NA42 475 aa6.56□□□□□ -1.36
HMGXB4-201ENST00000216106 CLCC1Q96S66 551 aa6.56□□□□□ -1.36
HMGXB4-201ENST00000216106 PARD6GQ9BYG4 376 aaPredicted RBP6.56□□□□□ -1.36
HMGXB4-201ENST00000216106 NDRG3Q9UGV2 375 aa6.56□□□□□ -1.36
HMGXB4-201ENST00000216106 PPIAL4AQ9Y536 164 aa6.56□□□□□ -1.36
HMGXB4-201ENST00000216106 hADV38S2A0JD32 116 aa6.56□□□□□ -1.36
HMGXB4-201ENST00000216106 H7C2Y5 167 aa6.56□□□□□ -1.36
HMGXB4-201ENST00000216106 IGKV1D-33P01593 117 aa6.56□□□□□ -1.36
HMGXB4-201ENST00000216106 IGKV1-33P01594 117 aa6.56□□□□□ -1.36
HMGXB4-201ENST00000216106 GRNP28799 593 aaKnown RBP6.56□□□□□ -1.36
HMGXB4-201ENST00000216106 RPL31P62899 125 aaKnown RBP6.56□□□□□ -1.36
HMGXB4-201ENST00000216106 RELBQ01201 579 aa6.56□□□□□ -1.36
HMGXB4-201ENST00000216106 NCMAPQ5T1S8 102 aa6.56□□□□□ -1.36
HMGXB4-201ENST00000216106 ACSM6Q6P461 480 aa6.56□□□□□ -1.36
HMGXB4-201ENST00000216106 SSX8Q7RTT4 187 aa6.56□□□□□ -1.36
HMGXB4-201ENST00000216106 C1orf87Q8N0U7 546 aa6.56□□□□□ -1.36
HMGXB4-201ENST00000216106 LINC01560Q8TB33 94 aa6.56□□□□□ -1.36
HMGXB4-201ENST00000216106 SMDT1Q9H4I9 107 aa6.56□□□□□ -1.36
HMGXB4-201ENST00000216106 TMEM106BQ9NUM4 274 aa6.56□□□□□ -1.36
HMGXB4-201ENST00000216106 RPUSD1Q9UJJ7 312 aaKnown RBP6.56□□□□□ -1.36
HMGXB4-201ENST00000216106 LINC00312Q9Y6C7 94 aa6.56□□□□□ -1.36
HMGXB4-201ENST00000216106 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.55□□□□□ -1.36
HMGXB4-201ENST00000216106 HMGB3O15347 200 aaKnown RBP6.55□□□□□ -1.36
HMGXB4-201ENST00000216106 SRP19P09132 144 aaKnown RBP6.55□□□□□ -1.36
HMGXB4-201ENST00000216106 KIR2DS2P43631 304 aa6.55□□□□□ -1.36
HMGXB4-201ENST00000216106 ZNF506Q5JVG8 444 aa6.55□□□□□ -1.36
HMGXB4-201ENST00000216106 LYPD2Q6UXB3 125 aa6.55□□□□□ -1.36
HMGXB4-201ENST00000216106 H1FXQ92522 213 aaKnown RBP6.55□□□□□ -1.36
HMGXB4-201ENST00000216106 CORO2AQ92828 525 aa6.55□□□□□ -1.36
HMGXB4-201ENST00000216106 ISOC2Q96AB3 205 aa6.55□□□□□ -1.36
HMGXB4-201ENST00000216106 RHOVQ96L33 236 aa6.55□□□□□ -1.36
HMGXB4-201ENST00000216106 HIPK2Q9H2X6 1198 aa6.55□□□□□ -1.36
HMGXB4-201ENST00000216106 SMCO4Q9NRQ5 59 aa6.55□□□□□ -1.36
HMGXB4-201ENST00000216106 ANKHD1Q8IWZ3 2542 aaKnown RBP6.55□□□□□ -1.36
HMGXB4-201ENST00000216106 TRAV1-1A0A0B4J248 108 aa6.55□□□□□ -1.36
HMGXB4-201ENST00000216106 FAM90A9PA6NNJ1 464 aa6.55□□□□□ -1.36
HMGXB4-201ENST00000216106 VSTM5A8MXK1 200 aa6.55□□□□□ -1.36
HMGXB4-201ENST00000216106 PLAUP00749 431 aa6.55□□□□□ -1.36
HMGXB4-201ENST00000216106 IFNA10P01566 189 aa6.55□□□□□ -1.36
HMGXB4-201ENST00000216106 SPCS3P61009 180 aa6.55□□□□□ -1.36
HMGXB4-201ENST00000216106 ATP6V1FQ16864 119 aa6.55□□□□□ -1.36
HMGXB4-201ENST00000216106 RPP25LQ8N5L8 163 aaKnown RBP6.55□□□□□ -1.36
HMGXB4-201ENST00000216106 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.55□□□□□ -1.36
HMGXB4-201ENST00000216106 HEYLQ9NQ87 328 aaPredicted RBP6.55□□□□□ -1.36
HMGXB4-201ENST00000216106 GAB2Q9UQC2 676 aa6.55□□□□□ -1.36
HMGXB4-201ENST00000216106 TPRP12270 2363 aaKnown RBP6.55□□□□□ -1.36
HMGXB4-201ENST00000216106 TACC2O95359 2948 aa6.55□□□□□ -1.36
HMGXB4-201ENST00000216106 MAP1LC3B2A6NCE7 125 aa6.55□□□□□ -1.36
HMGXB4-201ENST00000216106 THBS3P49746 956 aa6.55□□□□□ -1.36
HMGXB4-201ENST00000216106 UCNP55089 124 aa6.55□□□□□ -1.36
HMGXB4-201ENST00000216106 CASP6P55212 293 aa6.55□□□□□ -1.36
HMGXB4-201ENST00000216106 AARDQ4LEZ3 155 aa6.55□□□□□ -1.36
HMGXB4-201ENST00000216106 SLC25A48Q6ZT89 311 aaKnown RBP6.55□□□□□ -1.36
HMGXB4-201ENST00000216106 ZCCHC14Q8WYQ9 949 aaKnown RBP6.55□□□□□ -1.36
HMGXB4-201ENST00000216106 NPCDR1Q9BY65 106 aa6.55□□□□□ -1.36
HMGXB4-201ENST00000216106 MAP1LC3BQ9GZQ8 125 aa6.55□□□□□ -1.36
HMGXB4-201ENST00000216106 LINC00574Q9H8X3 128 aa6.55□□□□□ -1.36
HMGXB4-201ENST00000216106 SLC25A22Q9H936 323 aa6.55□□□□□ -1.36
HMGXB4-201ENST00000216106 NCOR2Q9Y618 2525 aa6.55□□□□□ -1.36
HMGXB4-201ENST00000216106 LOC102723971A0A1B0GUV8 181 aa6.54□□□□□ -1.36
HMGXB4-201ENST00000216106 HSPB1P04792 205 aaKnown RBP6.54□□□□□ -1.36
HMGXB4-201ENST00000216106 DEFA4P12838 97 aa6.54□□□□□ -1.36
HMGXB4-201ENST00000216106 OR4A47Q6IF82 309 aa6.54□□□□□ -1.36
HMGXB4-201ENST00000216106 GAL3ST2Q9H3Q3 398 aa6.54□□□□□ -1.36
HMGXB4-201ENST00000216106 MLXQ9UH92 298 aa6.54□□□□□ -1.36
HMGXB4-201ENST00000216106 TIMM9Q9Y5J7 89 aa6.54□□□□□ -1.36
HMGXB4-201ENST00000216106 RRHO14718 337 aa6.54□□□□□ -1.36
HMGXB4-201ENST00000216106 IGKV1-16P04430 117 aa6.54□□□□□ -1.36
HMGXB4-201ENST00000216106 ARG1P05089 322 aa6.54□□□□□ -1.36
HMGXB4-201ENST00000216106 CA7P43166 264 aa6.54□□□□□ -1.36
HMGXB4-201ENST00000216106 HOXA1P49639 335 aaPredicted RBP6.54□□□□□ -1.36
HMGXB4-201ENST00000216106 GNB2P62879 340 aa6.54□□□□□ -1.36
HMGXB4-201ENST00000216106 KHDC3LQ587J8 217 aa6.54□□□□□ -1.36
HMGXB4-201ENST00000216106 FFAR4Q5NUL3 377 aa6.54□□□□□ -1.36
HMGXB4-201ENST00000216106 ABHD12Q8N2K0 398 aa6.54□□□□□ -1.36
HMGXB4-201ENST00000216106 MBD3L1Q8WWY6 194 aa6.54□□□□□ -1.36
HMGXB4-201ENST00000216106 ZNF714Q96N38 554 aa6.54□□□□□ -1.36
HMGXB4-201ENST00000216106 TCF19Q9Y242 345 aa6.54□□□□□ -1.36
HMGXB4-201ENST00000216106 COL6A6A6NMZ7 2263 aa6.54□□□□□ -1.36
HMGXB4-201ENST00000216106 TNCP24821 2201 aa6.54□□□□□ -1.36
HMGXB4-201ENST00000216106 SMCO3A2RU48 225 aa6.54□□□□□ -1.36
HMGXB4-201ENST00000216106 C15orf61A6NNL5 157 aa6.54□□□□□ -1.36
HMGXB4-201ENST00000216106 COLCA2A8K830 154 aa6.54□□□□□ -1.36
HMGXB4-201ENST00000216106 CCL21O00585 134 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms