RNA–Protein interactions for RNA: ENST00000212355.8

TGFBR3-201, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-201ENST00000212355 CD24P25063 80 aa11.61□□□□□ -0.55
TGFBR3-201ENST00000212355 SRSF3P84103 164 aaKnown RBP11.61□□□□□ -0.55
TGFBR3-201ENST00000212355 ARHGEF17Q96PE2 2063 aaPredicted RBP11.61□□□□□ -0.55
TGFBR3-201ENST00000212355 ODAMA1E959 279 aa11.61□□□□□ -0.55
TGFBR3-201ENST00000212355 TGFBR3LH3BV60 316 aa11.61□□□□□ -0.55
TGFBR3-201ENST00000212355 ANOS1P23352 680 aa11.61□□□□□ -0.55
TGFBR3-201ENST00000212355 ID1P41134 155 aa11.61□□□□□ -0.55
TGFBR3-201ENST00000212355 TUBD1Q9UJT1 453 aa11.61□□□□□ -0.55
TGFBR3-201ENST00000212355 AGAP20933 346 aa11.61□□□□□ -0.55
TGFBR3-201ENST00000212355 DRAM1Q8N682 238 aa11.61□□□□□ -0.55
TGFBR3-201ENST00000212355 MGST3O14880 152 aa11.61□□□□□ -0.55
TGFBR3-201ENST00000212355 LCN2P80188 198 aa11.61□□□□□ -0.55
TGFBR3-201ENST00000212355 ZNF658BQ4V348 819 aaPredicted RBP11.61□□□□□ -0.55
TGFBR3-201ENST00000212355 RAXQ9Y2V3 346 aa11.61□□□□□ -0.55
TGFBR3-201ENST00000212355 PPIAL4CA0A0B4J2A2 164 aa11.6□□□□□ -0.55
TGFBR3-201ENST00000212355 IGKV3D-20A0A0C4DH25 116 aa11.6□□□□□ -0.55
TGFBR3-201ENST00000212355 GAGE10A6NGK3 116 aa11.6□□□□□ -0.55
TGFBR3-201ENST00000212355 PPIAL4GP0DN37 164 aa11.6□□□□□ -0.55
TGFBR3-201ENST00000212355 DMRTA1Q5VZB9 504 aa11.6□□□□□ -0.55
TGFBR3-201ENST00000212355 CALHM1Q8IU99 346 aa11.6□□□□□ -0.55
TGFBR3-201ENST00000212355 PHLDA3Q9Y5J5 127 aa11.6□□□□□ -0.55
TGFBR3-201ENST00000212355 TPRP12270 2363 aaKnown RBP11.6□□□□□ -0.55
TGFBR3-201ENST00000212355 RRN3P1Q2M238 152 aa11.6□□□□□ -0.55
TGFBR3-201ENST00000212355 ZNF107Q9UII5 783 aaPredicted RBP11.6□□□□□ -0.55
TGFBR3-201ENST00000212355 TBL2Q9Y4P3 447 aaKnown RBP11.6□□□□□ -0.55
TGFBR3-201ENST00000212355 LINC00305Q7Z4B0 112 aa11.6□□□□□ -0.55
TGFBR3-201ENST00000212355 SHISA5Q8N114 240 aa11.6□□□□□ -0.55
TGFBR3-201ENST00000212355 STPG3Q8N7X2 389 aa11.6□□□□□ -0.55
TGFBR3-201ENST00000212355 A0A1W2PRX2 142 aa11.6□□□□□ -0.55
TGFBR3-201ENST00000212355 ERGP11308 486 aa11.6□□□□□ -0.55
TGFBR3-201ENST00000212355 RELQ04864 619 aaPredicted RBP11.6□□□□□ -0.55
TGFBR3-201ENST00000212355 EBLN2Q6P2I7 272 aa11.6□□□□□ -0.55
TGFBR3-201ENST00000212355 TMEM160Q9NX00 188 aa11.6□□□□□ -0.55
TGFBR3-201ENST00000212355 FAM181BA6NEQ2 426 aa11.6□□□□□ -0.55
TGFBR3-201ENST00000212355 LEPROTL1O95214 131 aa11.6□□□□□ -0.55
TGFBR3-201ENST00000212355 FAM27E3Q08E93 113 aa11.6□□□□□ -0.55
TGFBR3-201ENST00000212355 LINC01590Q5TEZ4 76 aa11.6□□□□□ -0.55
TGFBR3-201ENST00000212355 ATRAIDQ6UW56 229 aa11.6□□□□□ -0.55
TGFBR3-201ENST00000212355 NFAM1Q8NET5 270 aaPredicted RBP11.6□□□□□ -0.55
TGFBR3-201ENST00000212355 OR51M1Q9H341 326 aa11.6□□□□□ -0.55
TGFBR3-201ENST00000212355 CGAP01215 116 aa11.59□□□□□ -0.55
TGFBR3-201ENST00000212355 Q96M66 194 aa11.59□□□□□ -0.55
TGFBR3-201ENST00000212355 SCO2A0A1W2PP80 73 aa11.59□□□□□ -0.55
TGFBR3-201ENST00000212355 SS18L1O75177 396 aaPredicted RBP11.59□□□□□ -0.55
TGFBR3-201ENST00000212355 ZCCHC24Q8N2G6 241 aaKnown RBP11.59□□□□□ -0.55
TGFBR3-201ENST00000212355 ZNF56Q15929 161 aa11.59□□□□□ -0.55
TGFBR3-201ENST00000212355 COL5A1-AS1Q5SY13 56 aa11.59□□□□□ -0.55
TGFBR3-201ENST00000212355 AMMECR1LQ6DCA0 310 aa11.59□□□□□ -0.55
TGFBR3-201ENST00000212355 SFTA2Q6UW10 78 aa11.59□□□□□ -0.55
TGFBR3-201ENST00000212355 ZBTB34Q8NCN2 500 aa11.59□□□□□ -0.55
TGFBR3-201ENST00000212355 SFRP2Q96HF1 295 aa11.59□□□□□ -0.55
TGFBR3-201ENST00000212355 MIEN1Q9BRT3 115 aa11.59□□□□□ -0.55
TGFBR3-201ENST00000212355 SLC25A33Q9BSK2 321 aa11.59□□□□□ -0.55
TGFBR3-201ENST00000212355 FAM19A2Q8N3H0 131 aa11.59□□□□□ -0.55
TGFBR3-201ENST00000212355 FDCSPQ8NFU4 85 aa11.59□□□□□ -0.55
TGFBR3-201ENST00000212355 GLMPQ8WWB7 406 aa11.59□□□□□ -0.55
TGFBR3-201ENST00000212355 OIT3Q8WWZ8 545 aa11.59□□□□□ -0.55
TGFBR3-201ENST00000212355 COL5A3P25940 1745 aaPredicted RBP11.59□□□□□ -0.55
TGFBR3-201ENST00000212355 CACNA1IQ9P0X4 2223 aa11.59□□□□□ -0.55
TGFBR3-201ENST00000212355 PLP1P60201 277 aa11.59□□□□□ -0.55
TGFBR3-201ENST00000212355 CENPWQ5EE01 88 aa11.59□□□□□ -0.55
TGFBR3-201ENST00000212355 ISG15P05161 165 aa11.58□□□□□ -0.55
TGFBR3-201ENST00000212355 FAM106CPP0CH98 169 aa11.58□□□□□ -0.55
TGFBR3-201ENST00000212355 CTAG1AP78358 180 aa11.58□□□□□ -0.55
TGFBR3-201ENST00000212355 PCOLCEQ15113 449 aa11.58□□□□□ -0.55
TGFBR3-201ENST00000212355 ZNF600Q6ZNG1 722 aa11.58□□□□□ -0.55
TGFBR3-201ENST00000212355 TCF23Q7RTU1 214 aa11.58□□□□□ -0.55
TGFBR3-201ENST00000212355 SAP25Q8TEE9 199 aa11.58□□□□□ -0.55
TGFBR3-201ENST00000212355 ZNF418Q8TF45 676 aaPredicted RBP11.58□□□□□ -0.55
TGFBR3-201ENST00000212355 FBLIM1Q8WUP2 373 aa11.58□□□□□ -0.55
TGFBR3-201ENST00000212355 DDA1Q9BW61 102 aa11.58□□□□□ -0.55
TGFBR3-201ENST00000212355 C19orf54Q5BKX5 351 aa11.58□□□□□ -0.56
TGFBR3-201ENST00000212355 C1orf53Q5VUE5 145 aa11.58□□□□□ -0.56
TGFBR3-201ENST00000212355 HIST1H2BAQ96A08 127 aa11.58□□□□□ -0.56
TGFBR3-201ENST00000212355 MARVELD3Q96A59 401 aa11.58□□□□□ -0.56
TGFBR3-201ENST00000212355 PARD6GQ9BYG4 376 aaPredicted RBP11.58□□□□□ -0.56
TGFBR3-201ENST00000212355 A8MWL6 223 aa11.58□□□□□ -0.56
TGFBR3-201ENST00000212355 NHLRC3Q5JS37 347 aa11.58□□□□□ -0.56
TGFBR3-201ENST00000212355 LEMD1Q68G75 181 aa11.58□□□□□ -0.56
TGFBR3-201ENST00000212355 GGACTQ9BVM4 153 aa11.58□□□□□ -0.56
TGFBR3-201ENST00000212355 DNAJC4Q9NNZ3 241 aa11.58□□□□□ -0.56
TGFBR3-201ENST00000212355 SCGB1A1P11684 91 aa11.58□□□□□ -0.56
TGFBR3-201ENST00000212355 ZNF708P17019 499 aa11.58□□□□□ -0.56
TGFBR3-201ENST00000212355 DUX5Q96PT3 197 aa11.58□□□□□ -0.56
TGFBR3-201ENST00000212355 ZNF430Q9H8G1 570 aaPredicted RBP11.58□□□□□ -0.56
TGFBR3-201ENST00000212355 PILRBQ9UKJ0 227 aa11.58□□□□□ -0.56
TGFBR3-201ENST00000212355 NPIPB8E9PQR5 432 aa11.58□□□□□ -0.56
TGFBR3-201ENST00000212355 TBX6O95947 436 aaPredicted RBP11.58□□□□□ -0.56
TGFBR3-201ENST00000212355 GPX1P07203 203 aa11.58□□□□□ -0.56
TGFBR3-201ENST00000212355 CLEC2AQ6UVW9 174 aa11.58□□□□□ -0.56
TGFBR3-201ENST00000212355 DPH3Q96FX2 82 aa11.58□□□□□ -0.56
TGFBR3-201ENST00000212355 PMCHL2Q9BQD1 86 aa11.58□□□□□ -0.56
TGFBR3-201ENST00000212355 COL24A1Q17RW2 1714 aa11.58□□□□□ -0.56
TGFBR3-201ENST00000212355 ZNF236Q9UL36 1845 aa11.58□□□□□ -0.56
TGFBR3-201ENST00000212355 IGFBP2P18065 325 aa11.57□□□□□ -0.56
TGFBR3-201ENST00000212355 ATP5G3P48201 142 aa11.57□□□□□ -0.56
TGFBR3-201ENST00000212355 SERF2P84101 59 aa11.57□□□□□ -0.56
TGFBR3-201ENST00000212355 LYRM7Q5U5X0 104 aa11.57□□□□□ -0.56
TGFBR3-201ENST00000212355 M0QZK8 103 aa11.57□□□□□ -0.56
TGFBR3-201ENST00000212355 GGCTO75223 188 aaKnown RBP11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms