RNA–Protein interactions for RNA: ENST00000043402.7

RTN4R-201, Transcript of reticulon 4 receptor, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RTN4R, Length 2,157 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4R-201ENST00000043402 TLE1Q04724 770 aa21.45■■□□□ 1.02
RTN4R-201ENST00000043402 PINX1Q96BK5 328 aaKnown RBP21.45■■□□□ 1.02
RTN4R-201ENST00000043402 EGLN1Q9GZT9 426 aa21.45■■□□□ 1.02
RTN4R-201ENST00000043402 TIMM9Q9Y5J7 89 aa21.45■■□□□ 1.02
RTN4R-201ENST00000043402 FCN3O75636 299 aa21.44■■□□□ 1.02
RTN4R-201ENST00000043402 NQO2P16083 231 aa21.44■■□□□ 1.02
RTN4R-201ENST00000043402 RPL35P42766 123 aaKnown RBP21.44■■□□□ 1.02
RTN4R-201ENST00000043402 ERVFRD-1P60508 538 aa21.44■■□□□ 1.02
RTN4R-201ENST00000043402 RELBQ01201 579 aa21.44■■□□□ 1.02
RTN4R-201ENST00000043402 ZNF787Q6DD87 383 aa21.44■■□□□ 1.02
RTN4R-201ENST00000043402 LYG1Q8N1E2 194 aa21.44■■□□□ 1.02
RTN4R-201ENST00000043402 CYB561D1Q8N8Q1 229 aa21.44■■□□□ 1.02
RTN4R-201ENST00000043402 GNG13Q9P2W3 67 aa21.44■■□□□ 1.02
RTN4R-201ENST00000043402 PUS1Q9Y606 427 aaKnown RBP eCLIP21.44■■□□□ 1.02
RTN4R-201ENST00000043402 GNG10P50151 68 aa21.44■■□□□ 1.02
RTN4R-201ENST00000043402 GNB2P62879 340 aa21.44■■□□□ 1.02
RTN4R-201ENST00000043402 RBPJQ06330 500 aa21.44■■□□□ 1.02
RTN4R-201ENST00000043402 ACSM6Q6P461 480 aa21.44■■□□□ 1.02
RTN4R-201ENST00000043402 ZFP82Q8N141 532 aa21.44■■□□□ 1.02
RTN4R-201ENST00000043402 RPP25LQ8N5L8 163 aaKnown RBP21.44■■□□□ 1.02
RTN4R-201ENST00000043402 OR4A16Q8NH70 328 aa21.44■■□□□ 1.02
RTN4R-201ENST00000043402 C2CD4CQ8TF44 421 aa21.44■■□□□ 1.02
RTN4R-201ENST00000043402 SAP30LQ9HAJ7 183 aa21.44■■□□□ 1.02
RTN4R-201ENST00000043402 TMEM140Q9NV12 185 aa21.44■■□□□ 1.02
RTN4R-201ENST00000043402 LOC102723971A0A1B0GUV8 181 aa21.43■■□□□ 1.02
RTN4R-201ENST00000043402 CEBPGP53567 150 aa21.43■■□□□ 1.02
RTN4R-201ENST00000043402 TFF3Q07654 80 aa21.43■■□□□ 1.02
RTN4R-201ENST00000043402 VWC2Q2TAL6 325 aa21.43■■□□□ 1.02
RTN4R-201ENST00000043402 KHDC3LQ587J8 217 aa21.43■■□□□ 1.02
RTN4R-201ENST00000043402 SSX8Q7RTT4 187 aa21.43■■□□□ 1.02
RTN4R-201ENST00000043402 ZNF383Q8NA42 475 aa21.43■■□□□ 1.02
RTN4R-201ENST00000043402 ZNF436-AS1Q8NC38 126 aaPredicted RBP21.43■■□□□ 1.02
RTN4R-201ENST00000043402 NEUROG1Q92886 237 aa21.43■■□□□ 1.02
RTN4R-201ENST00000043402 RELNP78509 3460 aa21.43■■□□□ 1.02
RTN4R-201ENST00000043402 SHISA9B4DS77 424 aa21.43■■□□□ 1.02
RTN4R-201ENST00000043402 NDUFB7P17568 137 aa21.43■■□□□ 1.02
RTN4R-201ENST00000043402 KIR2DS2P43631 304 aa21.43■■□□□ 1.02
RTN4R-201ENST00000043402 ERVK-16P61578 105 aa21.43■■□□□ 1.02
RTN4R-201ENST00000043402 MRPS11P82912 194 aaKnown RBP21.43■■□□□ 1.02
RTN4R-201ENST00000043402 DMRTC2Q8IXT2 367 aaPredicted RBP21.43■■□□□ 1.02
RTN4R-201ENST00000043402 VKORC1Q9BQB6 163 aa21.43■■□□□ 1.02
RTN4R-201ENST00000043402 IGF2RP11717 2491 aa21.42■■□□□ 1.02
RTN4R-201ENST00000043402 FGF7P21781 194 aa21.42■■□□□ 1.02
RTN4R-201ENST00000043402 SPCS3P61009 180 aa21.42■■□□□ 1.02
RTN4R-201ENST00000043402 OR4S2Q8NH73 311 aa21.42■■□□□ 1.02
RTN4R-201ENST00000043402 TUBA4BQ9H853 241 aa21.42■■□□□ 1.02
RTN4R-201ENST00000043402 ZNRD1Q9P1U0 126 aa21.42■■□□□ 1.02
RTN4R-201ENST00000043402 IQCF2Q8IXL9 164 aa21.41■■□□□ 1.02
RTN4R-201ENST00000043402 HIST1H2BAQ96A08 127 aa21.41■■□□□ 1.02
RTN4R-201ENST00000043402 ISOC2Q96AB3 205 aa21.41■■□□□ 1.02
RTN4R-201ENST00000043402 RPUSD1Q9UJJ7 312 aaKnown RBP21.41■■□□□ 1.02
RTN4R-201ENST00000043402 TRAV38-1A0A0B4J264 116 aa21.41■■□□□ 1.02
RTN4R-201ENST00000043402 ZFP92A6NM28 416 aa21.41■■□□□ 1.02
RTN4R-201ENST00000043402 TMEM178BH3BS89 294 aa21.41■■□□□ 1.02
RTN4R-201ENST00000043402 ARG1P05089 322 aa21.41■■□□□ 1.02
RTN4R-201ENST00000043402 MDKP21741 143 aaPredicted RBP21.41■■□□□ 1.02
RTN4R-201ENST00000043402 TMPRSS3P57727 454 aa21.41■■□□□ 1.02
RTN4R-201ENST00000043402 RHEBQ15382 184 aa21.41■■□□□ 1.02
RTN4R-201ENST00000043402 SLC25A10Q9UBX3 287 aaPredicted RBP21.41■■□□□ 1.02
RTN4R-201ENST00000043402 E7EQL1 145 aa21.4■■□□□ 1.02
RTN4R-201ENST00000043402 VDAC2P45880 294 aaPredicted RBP21.4■■□□□ 1.02
RTN4R-201ENST00000043402 RAB5BP61020 215 aa21.4■■□□□ 1.02
RTN4R-201ENST00000043402 PDLIM3Q53GG5 364 aaPredicted RBP21.4■■□□□ 1.02
RTN4R-201ENST00000043402 OR52E5Q8NH55 327 aa21.4■■□□□ 1.02
RTN4R-201ENST00000043402 CCL17Q92583 94 aa21.4■■□□□ 1.02
RTN4R-201ENST00000043402 RNASE6Q93091 150 aaKnown RBP21.4■■□□□ 1.02
RTN4R-201ENST00000043402 UNKLQ9H9P5 680 aaKnown RBP21.4■■□□□ 1.02
RTN4R-201ENST00000043402 LINC00312Q9Y6C7 94 aa21.4■■□□□ 1.02
RTN4R-201ENST00000043402 TRGV8A0A0C4DH27 118 aa21.4■■□□□ 1.02
RTN4R-201ENST00000043402 hADV38S2A0JD32 116 aa21.4■■□□□ 1.02
RTN4R-201ENST00000043402 NKX6-3A6NJ46 265 aa21.4■■□□□ 1.02
RTN4R-201ENST00000043402 H3BQ15 152 aa21.4■■□□□ 1.02
RTN4R-201ENST00000043402 THBS3P49746 956 aa21.4■■□□□ 1.02
RTN4R-201ENST00000043402 ZCCHC14Q8WYQ9 949 aaKnown RBP21.4■■□□□ 1.02
RTN4R-201ENST00000043402 NPCDR1Q9BY65 106 aa21.4■■□□□ 1.02
RTN4R-201ENST00000043402 MAP1LC3B2A6NCE7 125 aa21.39■■□□□ 1.01
RTN4R-201ENST00000043402 MT-ND4LP03901 98 aa21.39■■□□□ 1.01
RTN4R-201ENST00000043402 BCL2P10415 239 aa21.39■■□□□ 1.01
RTN4R-201ENST00000043402 NHLH1Q02575 133 aa21.39■■□□□ 1.01
RTN4R-201ENST00000043402 HABP2Q14520 560 aaPredicted RBP21.39■■□□□ 1.01
RTN4R-201ENST00000043402 RNF212Q495C1 297 aa21.39■■□□□ 1.01
RTN4R-201ENST00000043402 NCMAPQ5T1S8 102 aa21.39■■□□□ 1.01
RTN4R-201ENST00000043402 SLC25A48Q6ZT89 311 aaKnown RBP21.39■■□□□ 1.01
RTN4R-201ENST00000043402 RHOVQ96L33 236 aa21.39■■□□□ 1.01
RTN4R-201ENST00000043402 MAP1LC3BQ9GZQ8 125 aa21.39■■□□□ 1.01
RTN4R-201ENST00000043402 PPIAL4EA0A075B759 164 aa21.38■■□□□ 1.01
RTN4R-201ENST00000043402 PPIAL4DF5H284 164 aa21.38■■□□□ 1.01
RTN4R-201ENST00000043402 PPIAL4FP0DN26 164 aa21.38■■□□□ 1.01
RTN4R-201ENST00000043402 CISD1Q9NZ45 108 aaKnown RBP21.38■■□□□ 1.01
RTN4R-201ENST00000043402 RAXQ9Y2V3 346 aa21.38■■□□□ 1.01
RTN4R-201ENST00000043402 PPIAL4AQ9Y536 164 aa21.38■■□□□ 1.01
RTN4R-201ENST00000043402 ARFGEF3Q5TH69 2177 aa21.38■■□□□ 1.01
RTN4R-201ENST00000043402 ZNF429Q86V71 674 aa21.38■■□□□ 1.01
RTN4R-201ENST00000043402 ZZEF1O43149 2961 aa21.37■■□□□ 1.01
RTN4R-201ENST00000043402 ZNF98A6NK75 572 aa21.37■■□□□ 1.01
RTN4R-201ENST00000043402 C1orf196B1AJZ1 125 aa21.37■■□□□ 1.01
RTN4R-201ENST00000043402 RRHO14718 337 aa21.37■■□□□ 1.01
RTN4R-201ENST00000043402 RPL31P62899 125 aaKnown RBP21.37■■□□□ 1.01
RTN4R-201ENST00000043402 OR4A47Q6IF82 309 aa21.37■■□□□ 1.01
RTN4R-201ENST00000043402 Q8N7P7 452 aa21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms