RNA–Protein interactions for RNA: ENST00000005226.11

USH1C-201, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USH1C, Length 2,700 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-201ENST00000005226 DCAF10Q5QP82 559 aa11.68□□□□□ -0.54
USH1C-201ENST00000005226 ABHD12Q8N2K0 398 aa11.68□□□□□ -0.54
USH1C-201ENST00000005226 SSMEM1Q8WWF3 244 aa11.68□□□□□ -0.54
USH1C-201ENST00000005226 TP53TG5Q9Y2B4 290 aa11.68□□□□□ -0.54
USH1C-201ENST00000005226 POLR3KQ9Y2Y1 108 aaPredicted RBP11.68□□□□□ -0.54
USH1C-201ENST00000005226 ZFHX4Q86UP3 3567 aa11.68□□□□□ -0.54
USH1C-201ENST00000005226 SCO2A0A1W2PP80 73 aa11.68□□□□□ -0.54
USH1C-201ENST00000005226 SLC17A3O00476 420 aa11.68□□□□□ -0.54
USH1C-201ENST00000005226 CER1O95813 267 aa11.68□□□□□ -0.54
USH1C-201ENST00000005226 ADMP35318 185 aa11.68□□□□□ -0.54
USH1C-201ENST00000005226 R3HDM4Q96D70 268 aa11.68□□□□□ -0.54
USH1C-201ENST00000005226 MRPL37Q9BZE1 423 aaKnown RBP11.68□□□□□ -0.54
USH1C-201ENST00000005226 SPRR3Q9UBC9 169 aa11.68□□□□□ -0.54
USH1C-201ENST00000005226 KMT2EQ8IZD2 1858 aa11.68□□□□□ -0.54
USH1C-201ENST00000005226 OOEPA6NGQ2 149 aa11.67□□□□□ -0.54
USH1C-201ENST00000005226 C17orf112F2Z3M2 114 aa11.67□□□□□ -0.54
USH1C-201ENST00000005226 VENTXO95231 258 aa11.67□□□□□ -0.54
USH1C-201ENST00000005226 ARG2P78540 354 aa11.67□□□□□ -0.54
USH1C-201ENST00000005226 UTF1Q5T230 341 aa11.67□□□□□ -0.54
USH1C-201ENST00000005226 OCC1Q8TAD7 63 aa11.67□□□□□ -0.54
USH1C-201ENST00000005226 KLF14Q8TD94 323 aaPredicted RBP11.67□□□□□ -0.54
USH1C-201ENST00000005226 WDR83OSQ9Y284 106 aa11.67□□□□□ -0.54
USH1C-201ENST00000005226 SP1P08047 785 aa11.67□□□□□ -0.54
USH1C-201ENST00000005226 CBLN1P23435 193 aa11.67□□□□□ -0.54
USH1C-201ENST00000005226 FABP6P51161 128 aa11.67□□□□□ -0.54
USH1C-201ENST00000005226 NUTF2P61970 127 aaKnown RBP11.67□□□□□ -0.54
USH1C-201ENST00000005226 VWC2Q2TAL6 325 aa11.67□□□□□ -0.54
USH1C-201ENST00000005226 HLA-DRB5Q30154 266 aa11.67□□□□□ -0.54
USH1C-201ENST00000005226 SPATA31B1PQ5VZV4 182 aa11.67□□□□□ -0.54
USH1C-201ENST00000005226 TMEM144Q7Z5S9 345 aa11.67□□□□□ -0.54
USH1C-201ENST00000005226 NANOS1Q8WY41 292 aaKnown RBP11.67□□□□□ -0.54
USH1C-201ENST00000005226 MS4A10Q96PG2 267 aa11.67□□□□□ -0.54
USH1C-201ENST00000005226 ELOVL5Q9NYP7 299 aa11.67□□□□□ -0.54
USH1C-201ENST00000005226 PXMP4Q9Y6I8 212 aa11.67□□□□□ -0.54
USH1C-201ENST00000005226 HCFC1P51610 2035 aa11.67□□□□□ -0.54
USH1C-201ENST00000005226 IGHV1-2P23083 117 aa11.66□□□□□ -0.54
USH1C-201ENST00000005226 UBE2NP61088 152 aaKnown RBP11.66□□□□□ -0.54
USH1C-201ENST00000005226 IQCJQ1A5X6 159 aa11.66□□□□□ -0.54
USH1C-201ENST00000005226 ZBTB34Q8NCN2 500 aa11.66□□□□□ -0.54
USH1C-201ENST00000005226 BEND2Q8NDZ0 799 aa11.66□□□□□ -0.54
USH1C-201ENST00000005226 SFRP2Q96HF1 295 aa11.66□□□□□ -0.54
USH1C-201ENST00000005226 MS4A5Q9H3V2 200 aa11.66□□□□□ -0.54
USH1C-201ENST00000005226 ICE1Q9Y2F5 2266 aa11.66□□□□□ -0.54
USH1C-201ENST00000005226 F6UZH7 168 aa11.66□□□□□ -0.54
USH1C-201ENST00000005226 SPCS3P61009 180 aa11.66□□□□□ -0.54
USH1C-201ENST00000005226 Q8TCH9 128 aa11.66□□□□□ -0.54
USH1C-201ENST00000005226 CIB3Q96Q77 187 aaPredicted RBP11.66□□□□□ -0.54
USH1C-201ENST00000005226 TBX15Q96SF7 602 aa11.66□□□□□ -0.54
USH1C-201ENST00000005226 NEU1Q99519 415 aa11.66□□□□□ -0.54
USH1C-201ENST00000005226 HEYLQ9NQ87 328 aaPredicted RBP11.66□□□□□ -0.54
USH1C-201ENST00000005226 NAGKQ9UJ70 344 aa11.66□□□□□ -0.54
USH1C-201ENST00000005226 F2Z2F3 143 aa11.66□□□□□ -0.54
USH1C-201ENST00000005226 FOXH1O75593 365 aa11.66□□□□□ -0.54
USH1C-201ENST00000005226 CCKARP32238 428 aa11.66□□□□□ -0.54
USH1C-201ENST00000005226 RPL29P47914 159 aaKnown RBP11.66□□□□□ -0.54
USH1C-201ENST00000005226 RPL39P5Q59GN2 51 aa11.66□□□□□ -0.54
USH1C-201ENST00000005226 SLC35E4Q6ICL7 350 aa11.66□□□□□ -0.54
USH1C-201ENST00000005226 TREML4Q6UXN2 200 aa11.66□□□□□ -0.54
USH1C-201ENST00000005226 LEAP2Q969E1 77 aa11.66□□□□□ -0.54
USH1C-201ENST00000005226 MGST2Q99735 147 aa11.66□□□□□ -0.54
USH1C-201ENST00000005226 YTHDF2Q9Y5A9 579 aaKnown RBP11.66□□□□□ -0.54
USH1C-201ENST00000005226 KITLGP21583 273 aa11.65□□□□□ -0.54
USH1C-201ENST00000005226 SOX8P57073 446 aa11.65□□□□□ -0.54
USH1C-201ENST00000005226 PRAMEF5Q5TYX0 476 aa11.65□□□□□ -0.54
USH1C-201ENST00000005226 ALKBH2Q6NS38 261 aa11.65□□□□□ -0.54
USH1C-201ENST00000005226 ACP7Q6ZNF0 438 aa11.65□□□□□ -0.54
USH1C-201ENST00000005226 DBX2Q6ZNG2 339 aa11.65□□□□□ -0.54
USH1C-201ENST00000005226 TAAR6Q96RI8 345 aa11.65□□□□□ -0.54
USH1C-201ENST00000005226 SPRY4Q9C004 299 aa11.65□□□□□ -0.54
USH1C-201ENST00000005226 ZDHHC11Q9H8X9 412 aa11.65□□□□□ -0.54
USH1C-201ENST00000005226 TP53TG3Q9ULZ0 132 aa11.65□□□□□ -0.54
USH1C-201ENST00000005226 MDFIC2A0A1B0GVS7 189 aa11.65□□□□□ -0.55
USH1C-201ENST00000005226 PDE6DO43924 150 aa11.65□□□□□ -0.55
USH1C-201ENST00000005226 SPINK4O60575 86 aa11.65□□□□□ -0.55
USH1C-201ENST00000005226 RAB4BP61018 213 aa11.65□□□□□ -0.55
USH1C-201ENST00000005226 LCN2P80188 198 aa11.65□□□□□ -0.55
USH1C-201ENST00000005226 PDLIM3Q53GG5 364 aaPredicted RBP11.65□□□□□ -0.55
USH1C-201ENST00000005226 HES4Q9HCC6 221 aa11.65□□□□□ -0.55
USH1C-201ENST00000005226 ABI3Q9P2A4 366 aa11.65□□□□□ -0.55
USH1C-201ENST00000005226 TDGF1P13385 188 aa11.64□□□□□ -0.55
USH1C-201ENST00000005226 MYOD1P15172 320 aa11.64□□□□□ -0.55
USH1C-201ENST00000005226 FOSL1P15407 271 aa11.64□□□□□ -0.55
USH1C-201ENST00000005226 MRPL49Q13405 166 aaKnown RBP11.64□□□□□ -0.55
USH1C-201ENST00000005226 WDR82Q6UXN9 313 aa11.64□□□□□ -0.55
USH1C-201ENST00000005226 ZNF705AQ6ZN79 300 aaPredicted RBP11.64□□□□□ -0.55
USH1C-201ENST00000005226 KCNIP2Q9NS61 270 aa11.64□□□□□ -0.55
USH1C-201ENST00000005226 TET2Q6N021 2002 aaPredicted RBP11.64□□□□□ -0.55
USH1C-201ENST00000005226 SVILO95425 2214 aa11.64□□□□□ -0.55
USH1C-201ENST00000005226 IQCF6A8MYZ5 107 aa11.64□□□□□ -0.55
USH1C-201ENST00000005226 M0R1X1 148 aa11.64□□□□□ -0.55
USH1C-201ENST00000005226 LAMTOR5O43504 91 aa11.64□□□□□ -0.55
USH1C-201ENST00000005226 GPR12P47775 334 aa11.64□□□□□ -0.55
USH1C-201ENST00000005226 ERVFC1-1P60608 527 aa11.64□□□□□ -0.55
USH1C-201ENST00000005226 CD177Q8N6Q3 437 aa11.64□□□□□ -0.55
USH1C-201ENST00000005226 SEPSECSQ9HD40 501 aaKnown RBP11.64□□□□□ -0.55
USH1C-201ENST00000005226 CADP27708 2225 aa11.63□□□□□ -0.55
USH1C-201ENST00000005226 A6NNC1 897 aa11.63□□□□□ -0.55
USH1C-201ENST00000005226 K7EN84 100 aa11.63□□□□□ -0.55
USH1C-201ENST00000005226 TMPRSS2O15393 492 aa11.63□□□□□ -0.55
USH1C-201ENST00000005226 LINC00310P59036 64 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 112.6 ms