RNA–Protein interactions for RNA: ENSMUST00000115537.1

Col28a1-201, Transcript of Collagen alpha-1(XXVIII) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col28a1, Length 4,230 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col28a1-201ENSMUST00000115537 Tmem144Q8VEH0 348 aa7.75□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Olfr1269Q8VEZ2 309 aa7.75□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Olfr50Q8VGK5 312 aa7.75□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Mpv17lQ99MS3 194 aa7.75□□□□□ -1.17
Col28a1-201ENSMUST00000115537 CsQ9CZU6 464 aaKnown RBP7.75□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Scp2d1Q9DAH1 156 aa7.75□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Olfr951Q9EQ94 314 aa7.75□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Ighv6-5A0A0A6YWS9 119 aa7.74□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Slc35d1A2AKQ0 355 aa7.74□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Arxes1C0HK79 180 aa7.74□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Arxes2C0HK80 180 aa7.74□□□□□ -1.17
Col28a1-201ENSMUST00000115537 4930522L14RikE9QAG4 666 aa7.74□□□□□ -1.17
Col28a1-201ENSMUST00000115537 MpzP27573 248 aa7.74□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Fam160a2Q3U2I3 975 aa7.74□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Tnfrsf8Q60846 498 aa7.74□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Il11ra1Q64385 432 aa7.74□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Onecut2Q6XBJ3 505 aa7.74□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Rgs13Q8K443 158 aa7.74□□□□□ -1.17
Col28a1-201ENSMUST00000115537 MepeQ8K4L6 441 aa7.74□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Olfr998Q8VF76 314 aa7.74□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Msmo1Q9CRA4 293 aa7.74□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Paqr4Q9JJE4 273 aa7.74□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Gm28285A0A087WQ54 102 aa7.74□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Zfp971A2BFG8 470 aa7.74□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Vmn1r175K7N6T9 304 aa7.74□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Raet1bO08603 253 aa7.74□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Il4P07750 140 aa7.74□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Fgf7P36363 194 aa7.74□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Cd82P40237 266 aa7.74□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Tnfsf10P50592 291 aa7.74□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Zfp970Q08BU3 522 aa7.74□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Vax1Q2NKI2 338 aa7.74□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Fstl4Q5STE3 841 aa7.74□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Plpp1Q61469 283 aa7.74□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Tle1Q62440 770 aa7.74□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Tbl1xr1Q8BHJ5 514 aa7.74□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Lrfn3Q8BLY3 626 aa7.74□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Rpp21Q8R040 150 aa7.74□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Tmem234Q8R1E7 140 aa7.74□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Ms4a8Q99N10 290 aa7.74□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Rab32Q9CZE3 223 aa7.74□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Fam241aQ9CZL2 131 aa7.74□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Atp6v1fQ9D1K2 119 aa7.74□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Mcts1Q9DB27 181 aa7.74□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Ighv1-43A0A0A6YXN5 117 aa7.74□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Igkv15-103A0A140T8P3 115 aa7.74□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Usp36B1AQJ2 1098 aaKnown RBP7.74□□□□□ -1.17
Col28a1-201ENSMUST00000115537 5430403G16RikD3Z5L4 667 aa7.74□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Klk1b3P00756 261 aa7.74□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Ca6P18761 317 aa7.74□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Nkx2-2P42586 273 aa7.74□□□□□ -1.17
Col28a1-201ENSMUST00000115537 PmchP56942 165 aa7.74□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Txn2P97493 166 aa7.74□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Zfp36l3Q5ISE2 725 aa7.74□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Zfp948Q6DFU8 667 aa7.74□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Igsf21Q7TNR6 468 aa7.74□□□□□ -1.17
Col28a1-201ENSMUST00000115537 LgalslbQ7TPX9 165 aa7.74□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Gpr135Q7TQP2 457 aa7.74□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Kazald1Q8BJ66 313 aa7.74□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Ly6g6eQ8K1T6 166 aa7.74□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Rdh16f2Q8K3M1 318 aa7.74□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Olfr1009Q8VFK1 314 aa7.74□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Olfr283Q8VGU2 309 aa7.74□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Sdf2l1Q9ESP1 221 aa7.74□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Nudt3Q9JI46 168 aa7.74□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Tln1P26039 2541 aaKnown RBP7.73□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Gm2663F6R7E8 247 aaKnown RBP7.73□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Rpp30O88796 268 aaKnown RBP7.73□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Rims4P60191 269 aa7.73□□□□□ -1.17
Col28a1-201ENSMUST00000115537 AdmP97297 184 aa7.73□□□□□ -1.17
Col28a1-201ENSMUST00000115537 NrtnP97463 195 aa7.73□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Olfr145Q60882 310 aa7.73□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Fbxo27Q6DIA9 280 aa7.73□□□□□ -1.17
Col28a1-201ENSMUST00000115537 G6pc3Q6NSQ9 346 aa7.73□□□□□ -1.17
Col28a1-201ENSMUST00000115537 CebpeQ6PZD9 281 aa7.73□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Serinc5Q8BHJ6 461 aa7.73□□□□□ -1.17
Col28a1-201ENSMUST00000115537 4930474N05RikQ8BVR5 218 aa7.73□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Crispld2Q8BZQ2 495 aa7.73□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Defb21Q8C5Z4 100 aa7.73□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Vmn1r231Q8R2A3 311 aa7.73□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Olfr919Q8VF78 315 aa7.73□□□□□ -1.17
Col28a1-201ENSMUST00000115537 1810009J06RikQ9CPN7 247 aa7.73□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Sdf2Q9DCT5 211 aa7.73□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Vmn1r172Q9EPS4 313 aa7.73□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Nlrc5C3VPR6 1915 aa7.73□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Atg2aQ6P4T0 1914 aa7.73□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Fcrl6A1YIY0 268 aa7.73□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Olfr1097A2AVA9 315 aa7.73□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Gm15440D3Z3P4 90 aa7.73□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Vmn1r167G3UW71 315 aa7.73□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Ctdsp1P58466 261 aa7.73□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Gm826Q3UQ74 109 aa7.73□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Lrrc30Q3UV48 300 aa7.73□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Acp7Q8BX37 438 aa7.73□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Vwc2Q8C8N3 324 aa7.73□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Olfr1440Q8VFV4 315 aa7.73□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Olfr378Q8VGT2 314 aa7.73□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Olfr1413Q8VGU3 323 aa7.73□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Vmn1r43Q8VIC9 329 aa7.73□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Btf3l4Q9CQH7 158 aaKnown RBP7.73□□□□□ -1.17
Retrieved 100 of 22,080 RNA–protein pairs in 32.9 ms