RNA–Protein interactions for RNA: ENSMUST00000108531.7

Nup88-203, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,453 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-203ENSMUST00000108531 Gm20815J3KMI0 227 aa11.12□□□□□ -0.63
Nup88-203ENSMUST00000108531 Gm20914J3QME2 227 aa11.12□□□□□ -0.63
Nup88-203ENSMUST00000108531 H2-M10.1O19443 331 aa11.12□□□□□ -0.63
Nup88-203ENSMUST00000108531 Saa1P05366 122 aa11.12□□□□□ -0.63
Nup88-203ENSMUST00000108531 HexbP20060 536 aa11.12□□□□□ -0.63
Nup88-203ENSMUST00000108531 Clec3bP43025 202 aa11.12□□□□□ -0.63
Nup88-203ENSMUST00000108531 Gsc2P56916 198 aa11.12□□□□□ -0.63
Nup88-203ENSMUST00000108531 Rps23P62267 143 aaKnown RBP11.12□□□□□ -0.63
Nup88-203ENSMUST00000108531 Perm1Q149B8 807 aa11.12□□□□□ -0.63
Nup88-203ENSMUST00000108531 Snrnp70Q62376 448 aaKnown RBP11.12□□□□□ -0.63
Nup88-203ENSMUST00000108531 Btn1a1Q62556 524 aa11.12□□□□□ -0.63
Nup88-203ENSMUST00000108531 Cep290Q6A078 2472 aa11.12□□□□□ -0.63
Nup88-203ENSMUST00000108531 Mindy2Q6PDI6 601 aa11.12□□□□□ -0.63
Nup88-203ENSMUST00000108531 Gm21292Q78EE2 227 aa11.12□□□□□ -0.63
Nup88-203ENSMUST00000108531 Olfr1000Q7TR99 314 aa11.12□□□□□ -0.63
Nup88-203ENSMUST00000108531 Olfr222Q7TS30 318 aa11.12□□□□□ -0.63
Nup88-203ENSMUST00000108531 Mrps26Q80ZS3 200 aa11.12□□□□□ -0.63
Nup88-203ENSMUST00000108531 9430097D07RikQ8BS47 195 aa11.12□□□□□ -0.63
Nup88-203ENSMUST00000108531 Lrtm1Q8BXQ3 356 aa11.12□□□□□ -0.63
Nup88-203ENSMUST00000108531 Dctn4Q8CBY8 467 aa11.12□□□□□ -0.63
Nup88-203ENSMUST00000108531 Plcxd1Q8CHS4 345 aa11.12□□□□□ -0.63
Nup88-203ENSMUST00000108531 Osbpl11Q8CI95 751 aa11.12□□□□□ -0.63
Nup88-203ENSMUST00000108531 Gpr84Q8CIM5 396 aa11.12□□□□□ -0.63
Nup88-203ENSMUST00000108531 Rbpms2Q8VC52 206 aaKnown RBP11.12□□□□□ -0.63
Nup88-203ENSMUST00000108531 Olfr480Q8VEZ0 312 aa11.12□□□□□ -0.63
Nup88-203ENSMUST00000108531 Olfr508Q8VG42 310 aa11.12□□□□□ -0.63
Nup88-203ENSMUST00000108531 Ing5Q9D8Y8 240 aa11.12□□□□□ -0.63
Nup88-203ENSMUST00000108531 Gm5890A0A140LI04 305 aa11.12□□□□□ -0.63
Nup88-203ENSMUST00000108531 A630073D07RikE9PWS6 100 aa11.12□□□□□ -0.63
Nup88-203ENSMUST00000108531 Olfr895L7N210 316 aa11.12□□□□□ -0.63
Nup88-203ENSMUST00000108531 TectbO08524 329 aa11.12□□□□□ -0.63
Nup88-203ENSMUST00000108531 Sc5dO88822 299 aa11.12□□□□□ -0.63
Nup88-203ENSMUST00000108531 Tcl1b2P56841 117 aa11.12□□□□□ -0.63
Nup88-203ENSMUST00000108531 Rnd3P61588 244 aa11.12□□□□□ -0.63
Nup88-203ENSMUST00000108531 Vamp2P63044 116 aa11.12□□□□□ -0.63
Nup88-203ENSMUST00000108531 Oas1bQ60856 376 aa11.12□□□□□ -0.63
Nup88-203ENSMUST00000108531 Olfr11Q60890 313 aa11.12□□□□□ -0.63
Nup88-203ENSMUST00000108531 Prss54Q7M756 383 aa11.12□□□□□ -0.63
Nup88-203ENSMUST00000108531 ErasQ7TN89 227 aa11.12□□□□□ -0.63
Nup88-203ENSMUST00000108531 Olfr1509Q7TQQ0 308 aa11.12□□□□□ -0.63
Nup88-203ENSMUST00000108531 Olfr186Q8VEX5 309 aa11.12□□□□□ -0.63
Nup88-203ENSMUST00000108531 Ctag2Q9D9S4 219 aa11.12□□□□□ -0.63
Nup88-203ENSMUST00000108531 Golt1aQ9DCQ3 133 aa11.12□□□□□ -0.63
Nup88-203ENSMUST00000108531 Olfr878Q9EQA9 314 aa11.12□□□□□ -0.63
Nup88-203ENSMUST00000108531 Ypel1Q9ESC7 118 aa11.12□□□□□ -0.63
Nup88-203ENSMUST00000108531 Cbln3Q9JHG0 197 aa11.12□□□□□ -0.63
Nup88-203ENSMUST00000108531 Gm29049A0A087WSM5 227 aa11.11□□□□□ -0.63
Nup88-203ENSMUST00000108531 Olfr773F6VS78 311 aa11.11□□□□□ -0.63
Nup88-203ENSMUST00000108531 Ankrd65F6YK91 380 aa11.11□□□□□ -0.63
Nup88-203ENSMUST00000108531 Gm21118J3QPK8 227 aa11.11□□□□□ -0.63
Nup88-203ENSMUST00000108531 P06335 190 aa11.11□□□□□ -0.63
Nup88-203ENSMUST00000108531 H2-DMaP28078 261 aa11.11□□□□□ -0.63
Nup88-203ENSMUST00000108531 LepP41160 167 aa11.11□□□□□ -0.63
Nup88-203ENSMUST00000108531 Bcl2l15Q08ED0 167 aa11.11□□□□□ -0.63
Nup88-203ENSMUST00000108531 Cln6Q3U466 308 aa11.11□□□□□ -0.63
Nup88-203ENSMUST00000108531 BB287469Q3UT53 144 aa11.11□□□□□ -0.63
Nup88-203ENSMUST00000108531 Gm20909Q5FWB5 227 aa11.11□□□□□ -0.63
Nup88-203ENSMUST00000108531 Gm20852Q5M8R5 227 aa11.11□□□□□ -0.63
Nup88-203ENSMUST00000108531 Rasl2-9Q61820 216 aa11.11□□□□□ -0.63
Nup88-203ENSMUST00000108531 Gm20917Q62457 227 aa11.11□□□□□ -0.63
Nup88-203ENSMUST00000108531 Gm20809Q62458 227 aa11.11□□□□□ -0.63
Nup88-203ENSMUST00000108531 Gm20865Q62460 227 aa11.11□□□□□ -0.63
Nup88-203ENSMUST00000108531 Olfr193Q7TS43 309 aa11.11□□□□□ -0.63
Nup88-203ENSMUST00000108531 Alkal2Q80UG6 151 aa11.11□□□□□ -0.63
Nup88-203ENSMUST00000108531 Gm20738Q810R8 227 aa11.11□□□□□ -0.63
Nup88-203ENSMUST00000108531 Vmn1r66Q8K4I0 310 aa11.11□□□□□ -0.63
Nup88-203ENSMUST00000108531 Vmn1r4Q8R2D3 297 aa11.11□□□□□ -0.63
Nup88-203ENSMUST00000108531 Olfr772Q8VGC5 311 aa11.11□□□□□ -0.63
Nup88-203ENSMUST00000108531 Q9CQT9 129 aa11.11□□□□□ -0.63
Nup88-203ENSMUST00000108531 Gm20806Q9D9T3 227 aa11.11□□□□□ -0.63
Nup88-203ENSMUST00000108531 Cdk20Q9JHU3 346 aa11.11□□□□□ -0.63
Nup88-203ENSMUST00000108531 Prr12E9PYL2 2035 aaKnown RBP11.11□□□□□ -0.63
Nup88-203ENSMUST00000108531 2610044O15Rik8A0A087WRJ1 410 aa11.11□□□□□ -0.63
Nup88-203ENSMUST00000108531 Gm20918J3QN17 227 aa11.11□□□□□ -0.63
Nup88-203ENSMUST00000108531 Wipf3P0C7L0 485 aa11.11□□□□□ -0.63
Nup88-203ENSMUST00000108531 CryzP47199 331 aa11.11□□□□□ -0.63
Nup88-203ENSMUST00000108531 Prss38Q3UKY7 322 aa11.11□□□□□ -0.63
Nup88-203ENSMUST00000108531 Zfp874bQ7M6X2 447 aa11.11□□□□□ -0.63
Nup88-203ENSMUST00000108531 Zfp3Q8BLB0 497 aa11.11□□□□□ -0.63
Nup88-203ENSMUST00000108531 Fam234aQ8C0Z1 555 aa11.11□□□□□ -0.63
Nup88-203ENSMUST00000108531 Poc1aQ8JZX3 405 aa11.11□□□□□ -0.63
Nup88-203ENSMUST00000108531 Olfr129Q8VEY1 330 aa11.11□□□□□ -0.63
Nup88-203ENSMUST00000108531 Olfr639Q8VGY8 316 aa11.11□□□□□ -0.63
Nup88-203ENSMUST00000108531 Rnf151Q9CQ29 239 aa11.11□□□□□ -0.63
Nup88-203ENSMUST00000108531 Cdc42ep3Q9CQC5 254 aa11.11□□□□□ -0.63
Nup88-203ENSMUST00000108531 MiipA2A7Y5 387 aa11.1□□□□□ -0.63
Nup88-203ENSMUST00000108531 Kdf1A2A9F4 397 aa11.1□□□□□ -0.63
Nup88-203ENSMUST00000108531 Enpp7D3Z6V6 446 aa11.1□□□□□ -0.63
Nup88-203ENSMUST00000108531 Tpsb2P21845 276 aa11.1□□□□□ -0.63
Nup88-203ENSMUST00000108531 Rims4P60191 269 aa11.1□□□□□ -0.63
Nup88-203ENSMUST00000108531 Olfr1340Q3KPC7 315 aa11.1□□□□□ -0.63
Nup88-203ENSMUST00000108531 GalnsQ571E4 520 aa11.1□□□□□ -0.63
Nup88-203ENSMUST00000108531 Klk1b21Q61759 261 aa11.1□□□□□ -0.63
Nup88-203ENSMUST00000108531 Ypel4Q65Z93 127 aa11.1□□□□□ -0.63
Nup88-203ENSMUST00000108531 Utf1Q6J1H4 339 aa11.1□□□□□ -0.63
Nup88-203ENSMUST00000108531 Q6PIU9 354 aa11.1□□□□□ -0.63
Nup88-203ENSMUST00000108531 Slc24a5Q8C261 501 aa11.1□□□□□ -0.63
Nup88-203ENSMUST00000108531 Olfr1239Q8VGM8 305 aa11.1□□□□□ -0.63
Nup88-203ENSMUST00000108531 Smim8Q9CQQ0 97 aa11.1□□□□□ -0.63
Nup88-203ENSMUST00000108531 Fstl3Q9EQC7 256 aa11.1□□□□□ -0.63
Retrieved 100 of 22,080 RNA–protein pairs in 31.9 ms