RNA–Protein interactions for RNA: ENST00000641573.1

PHGDH-221, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-221ENST00000641573 LMOD1P29536 600 aaPredicted RBP15.74■□□□□ 0.11
PHGDH-221ENST00000641573 HSPA4P34932 840 aa15.74■□□□□ 0.11
PHGDH-221ENST00000641573 GPSM2P81274 684 aa15.74■□□□□ 0.11
PHGDH-221ENST00000641573 RABEP1Q15276 862 aa15.74■□□□□ 0.11
PHGDH-221ENST00000641573 SLFNL1Q499Z3 407 aa15.74■□□□□ 0.11
PHGDH-221ENST00000641573 ZSCAN25Q6NSZ9 544 aa15.74■□□□□ 0.11
PHGDH-221ENST00000641573 TMC4Q7Z404 712 aa15.74■□□□□ 0.11
PHGDH-221ENST00000641573 ZNF589Q86UQ0 364 aaPredicted RBP15.74■□□□□ 0.11
PHGDH-221ENST00000641573 VPS37DQ86XT2 251 aa15.74■□□□□ 0.11
PHGDH-221ENST00000641573 RTKN2Q8IZC4 609 aa15.74■□□□□ 0.11
PHGDH-221ENST00000641573 GPC2Q8N158 579 aa15.74■□□□□ 0.11
PHGDH-221ENST00000641573 C7orf43Q8WVR3 580 aa15.74■□□□□ 0.11
PHGDH-221ENST00000641573 SEC62Q99442 399 aaKnown RBP15.74■□□□□ 0.11
PHGDH-221ENST00000641573 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.74■□□□□ 0.111e-14■□□□□ 11
PHGDH-221ENST00000641573 THSD7BQ9C0I4 1608 aa15.74■□□□□ 0.11
PHGDH-221ENST00000641573 PPEF1O14829 653 aaPredicted RBP15.73■□□□□ 0.11
PHGDH-221ENST00000641573 SLC4A3P48751 1232 aa15.73■□□□□ 0.11
PHGDH-221ENST00000641573 ANAPC15P60006 121 aa15.73■□□□□ 0.11
PHGDH-221ENST00000641573 CYP4F22Q6NT55 531 aa15.73■□□□□ 0.11
PHGDH-221ENST00000641573 JDP2Q8WYK2 163 aa15.73■□□□□ 0.11
PHGDH-221ENST00000641573 PALD1Q9ULE6 856 aa15.73■□□□□ 0.11
PHGDH-221ENST00000641573 IRS2Q9Y4H2 1338 aa15.72■□□□□ 0.11
PHGDH-221ENST00000641573 IDH1O75874 414 aaKnown RBP15.72■□□□□ 0.11
PHGDH-221ENST00000641573 ATP2B4P23634 1241 aa15.72■□□□□ 0.11
PHGDH-221ENST00000641573 ALDH1B1P30837 517 aa15.72■□□□□ 0.11
PHGDH-221ENST00000641573 HIBADHP31937 336 aaKnown RBP15.72■□□□□ 0.11
PHGDH-221ENST00000641573 CCDC129Q6ZRS4 1044 aa15.72■□□□□ 0.11
PHGDH-221ENST00000641573 SP8Q8IXZ3 490 aa15.72■□□□□ 0.11
PHGDH-221ENST00000641573 MAP4K1Q92918 833 aa15.72■□□□□ 0.11
PHGDH-221ENST00000641573 SNX21Q969T3 373 aa15.72■□□□□ 0.11
PHGDH-221ENST00000641573 IL17RAQ96F46 866 aa15.72■□□□□ 0.11
PHGDH-221ENST00000641573 TBC1D2Q9BYX2 928 aa15.72■□□□□ 0.11
PHGDH-221ENST00000641573 TSKSQ9UJT2 592 aa15.72■□□□□ 0.11
PHGDH-221ENST00000641573 NSFL1CQ9UNZ2 370 aaKnown RBP15.72■□□□□ 0.11
PHGDH-221ENST00000641573 IQSEC3Q9UPP2 1182 aaPredicted RBP15.72■□□□□ 0.11
PHGDH-221ENST00000641573 MAST3O60307 1309 aa15.71■□□□□ 0.11
PHGDH-221ENST00000641573 SNED1Q8TER0 1413 aa15.71■□□□□ 0.11
PHGDH-221ENST00000641573 M0R2C6 588 aa15.71■□□□□ 0.11
PHGDH-221ENST00000641573 FZD9O00144 591 aa15.71■□□□□ 0.11
PHGDH-221ENST00000641573 SEMA3EO15041 775 aa15.71■□□□□ 0.11
PHGDH-221ENST00000641573 CA12O43570 354 aa15.71■□□□□ 0.11
PHGDH-221ENST00000641573 ADD2P35612 726 aa15.71■□□□□ 0.11
PHGDH-221ENST00000641573 IARSP41252 1262 aaKnown RBP15.71■□□□□ 0.11
PHGDH-221ENST00000641573 WASHC4Q2M389 1173 aa15.71■□□□□ 0.11
PHGDH-221ENST00000641573 C15orf52Q6ZUT6 534 aaKnown RBP15.71■□□□□ 0.11
PHGDH-221ENST00000641573 APPBP2Q92624 585 aa15.71■□□□□ 0.11
PHGDH-221ENST00000641573 MCOLN1Q9GZU1 580 aa15.71■□□□□ 0.11
PHGDH-221ENST00000641573 GGA1Q9UJY5 639 aa15.71■□□□□ 0.11
PHGDH-221ENST00000641573 DENND2AQ9ULE3 1009 aa15.71■□□□□ 0.11
PHGDH-221ENST00000641573 ATP6V0A2Q9Y487 856 aa15.71■□□□□ 0.11
PHGDH-221ENST00000641573 RBM8AQ9Y5S9 174 aaKnown RBP15.71■□□□□ 0.11
PHGDH-221ENST00000641573 GJA3Q9Y6H8 435 aa15.71■□□□□ 0.11
PHGDH-221ENST00000641573 UFL1O94874 794 aa15.7■□□□□ 0.1
PHGDH-221ENST00000641573 MAP2K2P36507 400 aa15.7■□□□□ 0.1
PHGDH-221ENST00000641573 EIF6P56537 245 aaKnown RBP15.7■□□□□ 0.1
PHGDH-221ENST00000641573 UBE3CQ15386 1083 aa15.7■□□□□ 0.1
PHGDH-221ENST00000641573 SLC9C2Q5TAH2 1124 aa15.7■□□□□ 0.1
PHGDH-221ENST00000641573 TXNRD3Q86VQ6 643 aa15.7■□□□□ 0.1
PHGDH-221ENST00000641573 HSCBQ8IWL3 235 aa15.7■□□□□ 0.1
PHGDH-221ENST00000641573 OSBP2Q969R2 916 aa15.7■□□□□ 0.1
PHGDH-221ENST00000641573 PODXL2Q9NZ53 605 aa15.7■□□□□ 0.1
PHGDH-221ENST00000641573 LRRC37AA6NMS7 1700 aa15.69■□□□□ 0.1
PHGDH-221ENST00000641573 ZBTB22O15209 634 aa15.69■□□□□ 0.1
PHGDH-221ENST00000641573 PDE6AP16499 860 aa15.69■□□□□ 0.1
PHGDH-221ENST00000641573 MAP3K12Q12852 859 aa15.69■□□□□ 0.1
PHGDH-221ENST00000641573 NECTIN1Q15223 517 aa15.69■□□□□ 0.1
PHGDH-221ENST00000641573 KCNB2Q92953 911 aa15.69■□□□□ 0.1
PHGDH-221ENST00000641573 SNX14Q9Y5W7 946 aa15.69■□□□□ 0.1
PHGDH-221ENST00000641573 COL1A1P02452 1464 aaPredicted RBP15.69■□□□□ 0.1
PHGDH-221ENST00000641573 PDS5AQ29RF7 1337 aaKnown RBP15.68■□□□□ 0.1
PHGDH-221ENST00000641573 ZNF532Q9HCE3 1301 aa15.68■□□□□ 0.1
PHGDH-221ENST00000641573 FRAT2O75474 233 aaPredicted RBP15.68■□□□□ 0.1
PHGDH-221ENST00000641573 CREB3L3Q68CJ9 461 aa15.68■□□□□ 0.1
PHGDH-221ENST00000641573 RASEFQ8IZ41 740 aa15.68■□□□□ 0.1
PHGDH-221ENST00000641573 TBC1D16Q8TBP0 767 aa15.68■□□□□ 0.1
PHGDH-221ENST00000641573 U3KPZ7 1027 aaPredicted RBP15.68■□□□□ 0.1
PHGDH-221ENST00000641573 TCRBV5S4A2TA0A5A2 114 aa15.67■□□□□ 0.1
PHGDH-221ENST00000641573 SLC27A2O14975 620 aa15.67■□□□□ 0.1
PHGDH-221ENST00000641573 AOC2O75106 756 aa15.67■□□□□ 0.1
PHGDH-221ENST00000641573 DGKZQ13574 1117 aa15.67■□□□□ 0.1
PHGDH-221ENST00000641573 OLFM4Q6UX06 510 aa15.67■□□□□ 0.1
PHGDH-221ENST00000641573 ZNF804AQ7Z570 1209 aa15.67■□□□□ 0.1
PHGDH-221ENST00000641573 MAGEB6Q8N7X4 407 aa15.67■□□□□ 0.1
PHGDH-221ENST00000641573 DSCC1Q9BVC3 393 aa15.67■□□□□ 0.1
PHGDH-221ENST00000641573 PUS7LQ9H0K6 701 aaKnown RBP15.67■□□□□ 0.1
PHGDH-221ENST00000641573 TMX4Q9H1E5 349 aaPredicted RBP15.67■□□□□ 0.1
PHGDH-221ENST00000641573 LRP2BPQ9P2M1 347 aa15.67■□□□□ 0.1
PHGDH-221ENST00000641573 POLLQ9UGP5 575 aa15.67■□□□□ 0.1
PHGDH-221ENST00000641573 TLL2Q9Y6L7 1015 aa15.67■□□□□ 0.1
PHGDH-221ENST00000641573 TNRC18O15417 2968 aaPredicted RBP15.66■□□□□ 0.1
PHGDH-221ENST00000641573 C6orf229H3BNL8 230 aa15.66■□□□□ 0.1
PHGDH-221ENST00000641573 ST18O60284 1047 aa15.66■□□□□ 0.1
PHGDH-221ENST00000641573 CD2BP2O95400 341 aaKnown RBP15.66■□□□□ 0.1
PHGDH-221ENST00000641573 FMR1Q06787 632 aaKnown RBP eCLIP15.66■□□□□ 0.18e-7■■□□□ 12
PHGDH-221ENST00000641573 CHAF1AQ13111 956 aaPredicted RBP15.66■□□□□ 0.1
PHGDH-221ENST00000641573 VPS53Q5VIR6 699 aa15.66■□□□□ 0.1
PHGDH-221ENST00000641573 RNF20Q5VTR2 975 aa15.66■□□□□ 0.1
PHGDH-221ENST00000641573 MPNDQ8N594 471 aa15.66■□□□□ 0.1
PHGDH-221ENST00000641573 TDRD7Q8NHU6 1098 aaKnown RBP15.66■□□□□ 0.1
PHGDH-221ENST00000641573 RAI14Q9P0K7 980 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms