RNA–Protein interactions for RNA: ENST00000641272.1

PHGDH-213, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-213ENST00000641272 FBXO33Q7Z6M2 555 aa20.97■□□□□ 0.95
PHGDH-213ENST00000641272 TMEM39BQ9GZU3 492 aa20.97■□□□□ 0.95
PHGDH-213ENST00000641272 USP44Q9H0E7 712 aa20.97■□□□□ 0.95
PHGDH-213ENST00000641272 ELP3Q9H9T3 547 aa20.97■□□□□ 0.95
PHGDH-213ENST00000641272 FKTNO75072 461 aa20.96■□□□□ 0.95
PHGDH-213ENST00000641272 USP2O75604 605 aaPredicted RBP20.96■□□□□ 0.95
PHGDH-213ENST00000641272 PDE8BO95263 885 aa20.96■□□□□ 0.95
PHGDH-213ENST00000641272 ZBTB48P10074 688 aaPredicted RBP20.96■□□□□ 0.95
PHGDH-213ENST00000641272 BCAMP50895 628 aa20.96■□□□□ 0.95
PHGDH-213ENST00000641272 CAVIN4Q5BKX8 364 aa20.96■□□□□ 0.95
PHGDH-213ENST00000641272 IFNL1Q8IU54 200 aa20.96■□□□□ 0.95
PHGDH-213ENST00000641272 TNRC18O15417 2968 aaPredicted RBP20.94■□□□□ 0.94
PHGDH-213ENST00000641272 ANKRD13AQ8IZ07 590 aa20.94■□□□□ 0.94
PHGDH-213ENST00000641272 CNKSR2Q8WXI2 1034 aa20.94■□□□□ 0.94
PHGDH-213ENST00000641272 TEPSINQ96N21 525 aa20.94■□□□□ 0.94
PHGDH-213ENST00000641272 PUM3Q15397 648 aaKnown RBP20.93■□□□□ 0.94
PHGDH-213ENST00000641272 OPTNQ96CV9 577 aa20.93■□□□□ 0.94
PHGDH-213ENST00000641272 CFHR5Q9BXR6 569 aa20.93■□□□□ 0.94
PHGDH-213ENST00000641272 SIL1Q9H173 461 aa20.93■□□□□ 0.94
PHGDH-213ENST00000641272 ALDH1A1P00352 501 aa20.92■□□□□ 0.94
PHGDH-213ENST00000641272 RFX5P48382 616 aaPredicted RBP20.92■□□□□ 0.94
PHGDH-213ENST00000641272 ALDH1L2Q3SY69 923 aa20.92■□□□□ 0.94
PHGDH-213ENST00000641272 NOM1Q5C9Z4 860 aaKnown RBP20.92■□□□□ 0.94
PHGDH-213ENST00000641272 TBC1D22AQ8WUA7 517 aa20.92■□□□□ 0.94
PHGDH-213ENST00000641272 TEKT1Q969V4 418 aa20.92■□□□□ 0.94
PHGDH-213ENST00000641272 EYA2O00167 538 aa20.91■□□□□ 0.94
PHGDH-213ENST00000641272 IFIT1P09914 478 aaKnown RBP20.91■□□□□ 0.94
PHGDH-213ENST00000641272 FGFR2P21802 821 aa20.91■□□□□ 0.94
PHGDH-213ENST00000641272 TNNI2P48788 182 aa20.91■□□□□ 0.94
PHGDH-213ENST00000641272 PKN2Q16513 984 aaKnown RBP20.91■□□□□ 0.94
PHGDH-213ENST00000641272 FBXO46Q6PJ61 603 aaPredicted RBP20.91■□□□□ 0.94
PHGDH-213ENST00000641272 UBTFL1P0CB47 393 aaPredicted RBP20.9■□□□□ 0.94
PHGDH-213ENST00000641272 SLC5A1P13866 664 aa20.9■□□□□ 0.94
PHGDH-213ENST00000641272 CRHR2Q13324 411 aa20.9■□□□□ 0.94
PHGDH-213ENST00000641272 VGLL4Q14135 290 aa20.9■□□□□ 0.94
PHGDH-213ENST00000641272 TRIM17Q9Y577 477 aa20.9■□□□□ 0.94
PHGDH-213ENST00000641272 INHBEP58166 350 aa20.89■□□□□ 0.93
PHGDH-213ENST00000641272 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.89■□□□□ 0.93
PHGDH-213ENST00000641272 CD99L2Q8TCZ2 262 aa20.89■□□□□ 0.93
PHGDH-213ENST00000641272 TMOD2Q9NZR1 351 aa20.89■□□□□ 0.93
PHGDH-213ENST00000641272 NOB1Q9ULX3 412 aaKnown RBP20.89■□□□□ 0.93
PHGDH-213ENST00000641272 PDE4DIPQ5VU43 2346 aa20.89■□□□□ 0.93
PHGDH-213ENST00000641272 ZSWIM8A7E2V4 1837 aa20.88■□□□□ 0.93
PHGDH-213ENST00000641272 MAST3O60307 1309 aa20.88■□□□□ 0.93
PHGDH-213ENST00000641272 KIF16BQ96L93 1317 aa20.88■□□□□ 0.93
PHGDH-213ENST00000641272 UNCXA6NJT0 531 aa20.88■□□□□ 0.93
PHGDH-213ENST00000641272 ATG9AQ7Z3C6 839 aa20.88■□□□□ 0.93
PHGDH-213ENST00000641272 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.88■□□□□ 0.93
PHGDH-213ENST00000641272 OTUD5Q96G74 571 aa20.88■□□□□ 0.93
PHGDH-213ENST00000641272 PTPN18Q99952 460 aa20.88■□□□□ 0.93
PHGDH-213ENST00000641272 OTOP1Q7RTM1 612 aa20.87■□□□□ 0.93
PHGDH-213ENST00000641272 ZDHHC15Q96MV8 337 aa20.87■□□□□ 0.93
PHGDH-213ENST00000641272 PA2G4Q9UQ80 394 aaKnown RBP20.87■□□□□ 0.93
PHGDH-213ENST00000641272 CSADQ9Y600 493 aa20.87■□□□□ 0.93
PHGDH-213ENST00000641272 LRRFIP2Q9Y608 721 aaKnown RBP20.87■□□□□ 0.93
PHGDH-213ENST00000641272 CCL15-CCL14A0A0B4J2E2 113 aa20.86■□□□□ 0.93
PHGDH-213ENST00000641272 HDLBPQ00341 1268 aaKnown RBP20.86■□□□□ 0.93
PHGDH-213ENST00000641272 CCL15Q16663 113 aa20.86■□□□□ 0.93
PHGDH-213ENST00000641272 ATP2B3Q16720 1220 aa20.86■□□□□ 0.93
PHGDH-213ENST00000641272 APOBEC3HQ6NTF7 200 aaKnown RBP20.86■□□□□ 0.93
PHGDH-213ENST00000641272 BRI3BPQ8WY22 251 aa20.86■□□□□ 0.93
PHGDH-213ENST00000641272 LPIN2Q92539 896 aa20.86■□□□□ 0.93
PHGDH-213ENST00000641272 AK9Q5TCS8 1911 aa20.86■□□□□ 0.93
PHGDH-213ENST00000641272 DIXDC1Q155Q3 683 aa20.85■□□□□ 0.93
PHGDH-213ENST00000641272 OTUD7BQ6GQQ9 843 aa20.85■□□□□ 0.93
PHGDH-213ENST00000641272 TRMT2AQ8IZ69 625 aaKnown RBP20.85■□□□□ 0.93
PHGDH-213ENST00000641272 WRNIP1Q96S55 665 aa20.85■□□□□ 0.93
PHGDH-213ENST00000641272 MEIS3Q99687 375 aa20.85■□□□□ 0.93
PHGDH-213ENST00000641272 DOCK2Q92608 1830 aa20.84■□□□□ 0.93
PHGDH-213ENST00000641272 PRDX5P30044 214 aa20.84■□□□□ 0.93
PHGDH-213ENST00000641272 MAP3K9P80192 1104 aa20.84■□□□□ 0.93
PHGDH-213ENST00000641272 CAP1Q01518 475 aa20.84■□□□□ 0.93
PHGDH-213ENST00000641272 MS4A4AQ96JQ5 239 aa20.84■□□□□ 0.93
PHGDH-213ENST00000641272 SNCAIPQ9Y6H5 919 aa20.84■□□□□ 0.93
PHGDH-213ENST00000641272 RPAP1Q9BWH6 1393 aaPredicted RBP20.84■□□□□ 0.93
PHGDH-213ENST00000641272 HTTP42858 3142 aa20.83■□□□□ 0.93
PHGDH-213ENST00000641272 TESPA1A2RU30 521 aaPredicted RBP20.83■□□□□ 0.93
PHGDH-213ENST00000641272 TAF1CQ15572 869 aaPredicted RBP20.83■□□□□ 0.93
PHGDH-213ENST00000641272 ZKSCAN4Q969J2 545 aaPredicted RBP20.83■□□□□ 0.93
PHGDH-213ENST00000641272 ERO1AQ96HE7 468 aa20.83■□□□□ 0.93
PHGDH-213ENST00000641272 API5Q9BZZ5 524 aaKnown RBP20.83■□□□□ 0.93
PHGDH-213ENST00000641272 DAGLAQ9Y4D2 1042 aa20.83■□□□□ 0.93
PHGDH-213ENST00000641272 ADORA1P30542 326 aa20.82■□□□□ 0.92
PHGDH-213ENST00000641272 PHKA1P46020 1223 aa20.82■□□□□ 0.92
PHGDH-213ENST00000641272 WDR66Q8TBY9 1149 aa20.82■□□□□ 0.92
PHGDH-213ENST00000641272 CEP126Q9P2H0 1117 aa20.82■□□□□ 0.92
PHGDH-213ENST00000641272 SUGT1Q9Y2Z0 365 aa20.82■□□□□ 0.92
PHGDH-213ENST00000641272 MYH2Q9UKX2 1941 aa20.82■□□□□ 0.92
PHGDH-213ENST00000641272 SPDYE5A6NIY4 337 aa20.81■□□□□ 0.92
PHGDH-213ENST00000641272 CIAO1O76071 339 aa20.81■□□□□ 0.92
PHGDH-213ENST00000641272 TCP10Q12799 353 aa20.81■□□□□ 0.92
PHGDH-213ENST00000641272 HHIPL2Q6UWX4 724 aa20.81■□□□□ 0.92
PHGDH-213ENST00000641272 FAM83AQ86UY5 434 aa20.81■□□□□ 0.92
PHGDH-213ENST00000641272 FAM43AQ8N2R8 423 aa20.81■□□□□ 0.92
PHGDH-213ENST00000641272 RBBP6Q7Z6E9 1792 aaKnown RBP20.81■□□□□ 0.92
PHGDH-213ENST00000641272 GTF2A2P52657 109 aa20.8■□□□□ 0.92
PHGDH-213ENST00000641272 SP3Q02447 781 aa20.8■□□□□ 0.92
PHGDH-213ENST00000641272 NFIAQ12857 509 aa20.8■□□□□ 0.92
PHGDH-213ENST00000641272 MIGA2Q7L4E1 593 aa20.8■□□□□ 0.92
PHGDH-213ENST00000641272 EFCC1Q9HA90 598 aa20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms