RNA–Protein interactions for RNA: ENST00000640957.1

SCARB2-227, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-227ENST00000640957 EIF3CLB5ME19 914 aaKnown RBP15.82■□□□□ 0.12
SCARB2-227ENST00000640957 GOLGA5Q8TBA6 731 aa15.82■□□□□ 0.12
SCARB2-227ENST00000640957 EIF3CQ99613 913 aaKnown RBP15.82■□□□□ 0.12
SCARB2-227ENST00000640957 SNRKQ9NRH2 765 aa15.82■□□□□ 0.12
SCARB2-227ENST00000640957 FDPSP14324 419 aaKnown RBP15.81■□□□□ 0.12
SCARB2-227ENST00000640957 TTC31Q49AM3 519 aaPredicted RBP15.81■□□□□ 0.12
SCARB2-227ENST00000640957 CCDC82Q8N4S0 544 aa15.81■□□□□ 0.12
SCARB2-227ENST00000640957 LINC00301Q8NCQ3 95 aa15.81■□□□□ 0.12
SCARB2-227ENST00000640957 ATG3Q9NT62 314 aa15.81■□□□□ 0.12
SCARB2-227ENST00000640957 DBNLQ9UJU6 430 aaKnown RBP15.81■□□□□ 0.12
SCARB2-227ENST00000640957 DIP2BQ9P265 1576 aa15.81■□□□□ 0.12
SCARB2-227ENST00000640957 STX17P56962 302 aa15.81■□□□□ 0.12
SCARB2-227ENST00000640957 MRPS25P82663 173 aaKnown RBP15.81■□□□□ 0.12
SCARB2-227ENST00000640957 C8orf76Q96K31 380 aa15.81■□□□□ 0.12
SCARB2-227ENST00000640957 MROH7-TTC4A0A0A0MT08 1334 aa15.81■□□□□ 0.12
SCARB2-227ENST00000640957 JAKMIP3Q5VZ66 844 aa15.81■□□□□ 0.12
SCARB2-227ENST00000640957 ICE2Q659A1 982 aa15.81■□□□□ 0.12
SCARB2-227ENST00000640957 MICALL1Q8N3F8 863 aa15.81■□□□□ 0.12
SCARB2-227ENST00000640957 AXIN2Q9Y2T1 843 aa15.81■□□□□ 0.12
SCARB2-227ENST00000640957 KAT6BQ8WYB5 2073 aa15.81■□□□□ 0.12
SCARB2-227ENST00000640957 NLRP12P59046 1061 aa15.8■□□□□ 0.12
SCARB2-227ENST00000640957 CHMP4BP1P59074 171 aa15.8■□□□□ 0.12
SCARB2-227ENST00000640957 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.8■□□□□ 0.12
SCARB2-227ENST00000640957 GPR161Q8N6U8 529 aaKnown RBP15.8■□□□□ 0.12
SCARB2-227ENST00000640957 INTS13Q9NVM9 706 aa15.8■□□□□ 0.12
SCARB2-227ENST00000640957 DENND2AQ9ULE3 1009 aa15.8■□□□□ 0.12
SCARB2-227ENST00000640957 PHLPP2Q6ZVD8 1323 aa15.8■□□□□ 0.12
SCARB2-227ENST00000640957 DDX58O95786 925 aaKnown RBP15.8■□□□□ 0.12
SCARB2-227ENST00000640957 KIF4BQ2VIQ3 1234 aa15.8■□□□□ 0.12
SCARB2-227ENST00000640957 DNAJC21Q5F1R6 531 aaKnown RBP15.8■□□□□ 0.12
SCARB2-227ENST00000640957 MUM1L1Q5H9M0 696 aa15.8■□□□□ 0.12
SCARB2-227ENST00000640957 ZNF569Q5MCW4 686 aa15.8■□□□□ 0.12
SCARB2-227ENST00000640957 ADALQ6DHV7 355 aa15.8■□□□□ 0.12
SCARB2-227ENST00000640957 TTC5Q8N0Z6 440 aa15.8■□□□□ 0.12
SCARB2-227ENST00000640957 GOLGA1Q92805 767 aa15.8■□□□□ 0.12
SCARB2-227ENST00000640957 CDC5LQ99459 802 aaKnown RBP15.8■□□□□ 0.12
SCARB2-227ENST00000640957 AKAP2Q9Y2D5 859 aa15.8■□□□□ 0.12
SCARB2-227ENST00000640957 PDIA3P30101 505 aaKnown RBP15.79■□□□□ 0.12
SCARB2-227ENST00000640957 TIMM10P62072 90 aa15.79■□□□□ 0.12
SCARB2-227ENST00000640957 GSPT2Q8IYD1 628 aaKnown RBP15.79■□□□□ 0.12
SCARB2-227ENST00000640957 IP6K1Q92551 441 aa15.79■□□□□ 0.12
SCARB2-227ENST00000640957 EHD4Q9H223 541 aa15.79■□□□□ 0.12
SCARB2-227ENST00000640957 OVOS2A0A0J9YW53 1432 aa15.79■□□□□ 0.12
SCARB2-227ENST00000640957 OVOS2Q6IE36 1432 aa15.79■□□□□ 0.12
SCARB2-227ENST00000640957 SYKP43405 635 aa15.79■□□□□ 0.12
SCARB2-227ENST00000640957 AKAP17AQ02040 695 aaKnown RBP15.79■□□□□ 0.12
SCARB2-227ENST00000640957 KRT28Q7Z3Y7 464 aa15.79■□□□□ 0.12
SCARB2-227ENST00000640957 GPIHBP1Q8IV16 184 aa15.79■□□□□ 0.12
SCARB2-227ENST00000640957 TFR2Q9UP52 801 aa15.79■□□□□ 0.12
SCARB2-227ENST00000640957 MRFAP1Q9Y605 127 aa15.79■□□□□ 0.12
SCARB2-227ENST00000640957 PLEKHG1Q9ULL1 1385 aa15.79■□□□□ 0.12
SCARB2-227ENST00000640957 CEP170BQ9Y4F5 1589 aaPredicted RBP15.79■□□□□ 0.12
SCARB2-227ENST00000640957 CASP1P29466 404 aa15.79■□□□□ 0.12
SCARB2-227ENST00000640957 LIG3P49916 1009 aa15.79■□□□□ 0.12
SCARB2-227ENST00000640957 MAP3K9P80192 1104 aa15.79■□□□□ 0.12
SCARB2-227ENST00000640957 COPS6Q7L5N1 327 aa15.79■□□□□ 0.12
SCARB2-227ENST00000640957 DLC1Q96QB1 1528 aa15.79■□□□□ 0.12
SCARB2-227ENST00000640957 ANKRD26Q9UPS8 1709 aa15.78■□□□□ 0.12
SCARB2-227ENST00000640957 CPLX1O14810 134 aa15.78■□□□□ 0.12
SCARB2-227ENST00000640957 ZSCAN12O43309 604 aa15.78■□□□□ 0.12
SCARB2-227ENST00000640957 PFKFB2O60825 505 aa15.78■□□□□ 0.12
SCARB2-227ENST00000640957 A1BGP04217 495 aa15.78■□□□□ 0.12
SCARB2-227ENST00000640957 DHX32Q7L7V1 743 aaKnown RBP15.78■□□□□ 0.12
SCARB2-227ENST00000640957 CNNM3Q8NE01 707 aa15.78■□□□□ 0.12
SCARB2-227ENST00000640957 VSNL1P62760 191 aa15.78■□□□□ 0.12
SCARB2-227ENST00000640957 FOXP4Q8IVH2 680 aaPredicted RBP15.78■□□□□ 0.12
SCARB2-227ENST00000640957 GOLGA6L1Q8N7Z2 621 aa15.78■□□□□ 0.12
SCARB2-227ENST00000640957 SAMSN1Q9NSI8 373 aaKnown RBP15.78■□□□□ 0.12
SCARB2-227ENST00000640957 GRM8O00222 908 aa15.78■□□□□ 0.12
SCARB2-227ENST00000640957 HIP1O00291 1037 aa15.78■□□□□ 0.12
SCARB2-227ENST00000640957 UBE3BQ7Z3V4 1068 aa15.78■□□□□ 0.12
SCARB2-227ENST00000640957 XAGE3Q8WTP9 111 aa15.78■□□□□ 0.12
SCARB2-227ENST00000640957 GIGYF1O75420 1035 aaPredicted RBP15.77■□□□□ 0.12
SCARB2-227ENST00000640957 TXLNAP40222 546 aa15.77■□□□□ 0.12
SCARB2-227ENST00000640957 SMARCC2Q8TAQ2 1214 aa15.77■□□□□ 0.12
SCARB2-227ENST00000640957 PHKBQ93100 1093 aa15.77■□□□□ 0.12
SCARB2-227ENST00000640957 FAM204AQ9H8W3 233 aa15.77■□□□□ 0.12
SCARB2-227ENST00000640957 STRN4Q9NRL3 753 aa15.77■□□□□ 0.12
SCARB2-227ENST00000640957 PCDHA5Q9Y5H7 936 aa15.77■□□□□ 0.12
SCARB2-227ENST00000640957 MYL5Q02045 173 aa15.77■□□□□ 0.11
SCARB2-227ENST00000640957 NCAPH2Q6IBW4 605 aa15.77■□□□□ 0.11
SCARB2-227ENST00000640957 EXOC4Q96A65 974 aa15.77■□□□□ 0.11
SCARB2-227ENST00000640957 UBXN6Q9BZV1 441 aa15.77■□□□□ 0.11
SCARB2-227ENST00000640957 ANKZF1Q9H8Y5 726 aa15.77■□□□□ 0.11
SCARB2-227ENST00000640957 CARMIL3Q8ND23 1372 aa15.76■□□□□ 0.11
SCARB2-227ENST00000640957 NEDD4P46934 1319 aa15.76■□□□□ 0.11
SCARB2-227ENST00000640957 GOLGA8BA8MQT2 603 aa15.76■□□□□ 0.11
SCARB2-227ENST00000640957 E7EWF7 191 aa15.76■□□□□ 0.11
SCARB2-227ENST00000640957 RNMTO43148 476 aaKnown RBP15.76■□□□□ 0.11
SCARB2-227ENST00000640957 HSPA2P54652 639 aa15.76■□□□□ 0.11
SCARB2-227ENST00000640957 HSP90B2PQ58FF3 399 aa15.76■□□□□ 0.11
SCARB2-227ENST00000640957 VSTM4Q8IW00 320 aa15.76■□□□□ 0.11
SCARB2-227ENST00000640957 MYL10Q9BUA6 226 aa15.76■□□□□ 0.11
SCARB2-227ENST00000640957 HMG20BQ9P0W2 317 aa15.76■□□□□ 0.11
SCARB2-227ENST00000640957 KLF18A0A0U1RQI7 1052 aa15.76■□□□□ 0.11
SCARB2-227ENST00000640957 A0A1B0GUL7 405 aa15.76■□□□□ 0.11
SCARB2-227ENST00000640957 ENC1O14682 589 aa15.76■□□□□ 0.11
SCARB2-227ENST00000640957 TEX33O43247 280 aa15.76■□□□□ 0.11
SCARB2-227ENST00000640957 KRT32Q14532 448 aa15.76■□□□□ 0.11
SCARB2-227ENST00000640957 MCMDC2Q4G0Z9 681 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms