RNA–Protein interactions for RNA: ENST00000640916.1

SCARB2-226, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 689 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-226ENST00000640916 PRMT2P55345 433 aa10.6□□□□□ -0.71
SCARB2-226ENST00000640916 DLGAP5Q15398 846 aa10.6□□□□□ -0.71
SCARB2-226ENST00000640916 CCL15Q16663 113 aa10.6□□□□□ -0.71
SCARB2-226ENST00000640916 CCDC152Q4G0S7 254 aa10.6□□□□□ -0.71
SCARB2-226ENST00000640916 ANKRD18AQ8IVF6 992 aa10.6□□□□□ -0.71
SCARB2-226ENST00000640916 CDAN1Q8IWY9 1227 aa10.6□□□□□ -0.71
SCARB2-226ENST00000640916 NKX2-3Q8TAU0 364 aa10.6□□□□□ -0.71
SCARB2-226ENST00000640916 GDF15Q99988 308 aa10.6□□□□□ -0.71
SCARB2-226ENST00000640916 GNRH1P01148 92 aa10.59□□□□□ -0.71
SCARB2-226ENST00000640916 PCCAP05165 728 aaPredicted RBP10.59□□□□□ -0.71
SCARB2-226ENST00000640916 BMP8BP34820 402 aa10.59□□□□□ -0.71
SCARB2-226ENST00000640916 GTF2IP78347 998 aa10.59□□□□□ -0.71
SCARB2-226ENST00000640916 RASA3Q14644 834 aa10.59□□□□□ -0.71
SCARB2-226ENST00000640916 C17orf99Q6UX52 265 aa10.59□□□□□ -0.71
SCARB2-226ENST00000640916 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.59□□□□□ -0.71
SCARB2-226ENST00000640916 TRIM47Q96LD4 638 aa10.59□□□□□ -0.71
SCARB2-226ENST00000640916 TEPSINQ96N21 525 aa10.59□□□□□ -0.71
SCARB2-226ENST00000640916 BSDC1Q9NW68 430 aaPredicted RBP10.59□□□□□ -0.71
SCARB2-226ENST00000640916 PRUNE2Q8WUY3 3088 aa10.59□□□□□ -0.71
SCARB2-226ENST00000640916 LAMA2P24043 3122 aaKnown RBP10.59□□□□□ -0.71
SCARB2-226ENST00000640916 CLSPNQ9HAW4 1339 aa10.58□□□□□ -0.71
SCARB2-226ENST00000640916 IRS2Q9Y4H2 1338 aa10.58□□□□□ -0.71
SCARB2-226ENST00000640916 ARAP2Q8WZ64 1704 aa10.58□□□□□ -0.72
SCARB2-226ENST00000640916 TTLL13PA6NNM8 815 aa10.58□□□□□ -0.72
SCARB2-226ENST00000640916 BTBD19C9JJ37 291 aa10.58□□□□□ -0.72
SCARB2-226ENST00000640916 FARP2O94887 1054 aaPredicted RBP10.58□□□□□ -0.72
SCARB2-226ENST00000640916 GRK4P32298 578 aa10.58□□□□□ -0.72
SCARB2-226ENST00000640916 GTF2A2P52657 109 aa10.58□□□□□ -0.72
SCARB2-226ENST00000640916 PRDM6Q9NQX0 595 aa10.58□□□□□ -0.72
SCARB2-226ENST00000640916 SRRDQ9UH36 339 aa10.58□□□□□ -0.72
SCARB2-226ENST00000640916 RIPOR2Q9Y4F9 1068 aa10.58□□□□□ -0.72
SCARB2-226ENST00000640916 ADGRA2Q96PE1 1338 aa10.58□□□□□ -0.72
SCARB2-226ENST00000640916 A0A1B0GUL6 1792 aa10.57□□□□□ -0.72
SCARB2-226ENST00000640916 CHL1O00533 1208 aa10.57□□□□□ -0.72
SCARB2-226ENST00000640916 ATMINO43313 823 aaPredicted RBP10.57□□□□□ -0.72
SCARB2-226ENST00000640916 EVI5O60447 810 aa10.57□□□□□ -0.72
SCARB2-226ENST00000640916 OSBPP22059 807 aa10.57□□□□□ -0.72
SCARB2-226ENST00000640916 BCAMP50895 628 aa10.57□□□□□ -0.72
SCARB2-226ENST00000640916 VGLL4Q14135 290 aa10.57□□□□□ -0.72
SCARB2-226ENST00000640916 LRIT3Q3SXY7 679 aa10.57□□□□□ -0.72
SCARB2-226ENST00000640916 CFAP100Q494V2 611 aa10.57□□□□□ -0.72
SCARB2-226ENST00000640916 TTLL11Q8NHH1 800 aa10.57□□□□□ -0.72
SCARB2-226ENST00000640916 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.57□□□□□ -0.72
SCARB2-226ENST00000640916 U2AF1L4Q8WU68 220 aaKnown RBP10.57□□□□□ -0.72
SCARB2-226ENST00000640916 RNF208Q9H0X6 261 aa10.57□□□□□ -0.72
SCARB2-226ENST00000640916 MUC3AQ02505 3323 aa10.56□□□□□ -0.72
SCARB2-226ENST00000640916 SGPL1O95470 568 aa10.56□□□□□ -0.72
SCARB2-226ENST00000640916 PSMC4P43686 418 aa10.56□□□□□ -0.72
SCARB2-226ENST00000640916 KIF22Q14807 665 aa10.56□□□□□ -0.72
SCARB2-226ENST00000640916 HDGFL1Q5TGJ6 251 aa10.56□□□□□ -0.72
SCARB2-226ENST00000640916 CCDC191Q8NCU4 936 aa10.56□□□□□ -0.72
SCARB2-226ENST00000640916 UNC93B1Q9H1C4 597 aa10.56□□□□□ -0.72
SCARB2-226ENST00000640916 GREM2Q9H772 168 aa10.56□□□□□ -0.72
SCARB2-226ENST00000640916 CD209Q9NNX6 404 aa10.56□□□□□ -0.72
SCARB2-226ENST00000640916 ZCCHC17Q9NP64 241 aaKnown RBP10.56□□□□□ -0.72
SCARB2-226ENST00000640916 DBF4Q9UBU7 674 aaPredicted RBP10.56□□□□□ -0.72
SCARB2-226ENST00000640916 TAOK2Q9UL54 1235 aa10.56□□□□□ -0.72
SCARB2-226ENST00000640916 LEMD3Q9Y2U8 911 aa10.56□□□□□ -0.72
SCARB2-226ENST00000640916 DOCK3Q8IZD9 2030 aa10.55□□□□□ -0.72
SCARB2-226ENST00000640916 SPDYE5A6NIY4 337 aa10.55□□□□□ -0.72
SCARB2-226ENST00000640916 NEFMP07197 916 aa10.55□□□□□ -0.72
SCARB2-226ENST00000640916 CTSWP56202 376 aa10.55□□□□□ -0.72
SCARB2-226ENST00000640916 RIPK4P57078 832 aa10.55□□□□□ -0.72
SCARB2-226ENST00000640916 MAP3K9P80192 1104 aa10.55□□□□□ -0.72
SCARB2-226ENST00000640916 CDC5LQ99459 802 aaKnown RBP10.55□□□□□ -0.72
SCARB2-226ENST00000640916 MYD88Q99836 296 aa10.55□□□□□ -0.72
SCARB2-226ENST00000640916 PHAXQ9H814 394 aaKnown RBP10.55□□□□□ -0.72
SCARB2-226ENST00000640916 VEZTQ9HBM0 779 aa10.55□□□□□ -0.72
SCARB2-226ENST00000640916 HYPKQ9NX55 129 aa10.55□□□□□ -0.72
SCARB2-226ENST00000640916 F8W031 263 aaPredicted RBP10.54□□□□□ -0.72
SCARB2-226ENST00000640916 SNAP23O00161 211 aa10.54□□□□□ -0.72
SCARB2-226ENST00000640916 HSP90B1P14625 803 aaKnown RBP10.54□□□□□ -0.72
SCARB2-226ENST00000640916 RAET1EQ8TD07 263 aa10.54□□□□□ -0.72
SCARB2-226ENST00000640916 GUCD1Q96NT3 240 aa10.54□□□□□ -0.72
SCARB2-226ENST00000640916 CRISPLD2Q9H0B8 497 aa10.54□□□□□ -0.72
SCARB2-226ENST00000640916 ZNF70Q9UC06 446 aaPredicted RBP10.54□□□□□ -0.72
SCARB2-226ENST00000640916 CPA4Q9UI42 421 aa10.54□□□□□ -0.72
SCARB2-226ENST00000640916 GABRQQ9UN88 632 aa10.54□□□□□ -0.72
SCARB2-226ENST00000640916 SNCAIPQ9Y6H5 919 aa10.54□□□□□ -0.72
SCARB2-226ENST00000640916 MYPNQ86TC9 1320 aa10.54□□□□□ -0.72
SCARB2-226ENST00000640916 IRF6O14896 467 aa10.53□□□□□ -0.72
SCARB2-226ENST00000640916 MYO1BO43795 1136 aa10.53□□□□□ -0.72
SCARB2-226ENST00000640916 HOXB7P09629 217 aa10.53□□□□□ -0.72
SCARB2-226ENST00000640916 CETPP11597 493 aa10.53□□□□□ -0.72
SCARB2-226ENST00000640916 ATN1P54259 1190 aaPredicted RBP10.53□□□□□ -0.72
SCARB2-226ENST00000640916 PRKCZQ05513 592 aa10.53□□□□□ -0.72
SCARB2-226ENST00000640916 RIC3Q7Z5B4 369 aa10.53□□□□□ -0.72
SCARB2-226ENST00000640916 DIS3LQ8TF46 1054 aaKnown RBP10.53□□□□□ -0.72
SCARB2-226ENST00000640916 CWC25Q9NXE8 425 aaPredicted RBP10.53□□□□□ -0.72
SCARB2-226ENST00000640916 POTEB2H3BUK9 544 aa10.52□□□□□ -0.73
SCARB2-226ENST00000640916 IL1R1P14778 569 aa10.52□□□□□ -0.73
SCARB2-226ENST00000640916 TMPOP42166 694 aaKnown RBP10.52□□□□□ -0.73
SCARB2-226ENST00000640916 FKBP1AP62942 108 aaKnown RBP10.52□□□□□ -0.73
SCARB2-226ENST00000640916 MOGSQ13724 837 aa10.52□□□□□ -0.73
SCARB2-226ENST00000640916 C15orf52Q6ZUT6 534 aaKnown RBP10.52□□□□□ -0.73
SCARB2-226ENST00000640916 TDHQ8IZJ6 230 aa10.52□□□□□ -0.73
SCARB2-226ENST00000640916 HELBQ8NG08 1087 aaPredicted RBP10.52□□□□□ -0.73
SCARB2-226ENST00000640916 PAWRQ96IZ0 340 aaKnown RBP10.52□□□□□ -0.73
SCARB2-226ENST00000640916 TMEM39BQ9GZU3 492 aa10.52□□□□□ -0.73
SCARB2-226ENST00000640916 TDRD3Q9H7E2 651 aaKnown RBP10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms