RNA–Protein interactions for RNA: ENST00000640648.1

NECAP1-227, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 5,166 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-227ENST00000640648 MAML3Q96JK9 1138 aa9.31□□□□□ -0.92
NECAP1-227ENST00000640648 C8orf76Q96K31 380 aa9.31□□□□□ -0.92
NECAP1-227ENST00000640648 CEP63Q96MT8 703 aa9.31□□□□□ -0.92
NECAP1-227ENST00000640648 NPC1L1Q9UHC9 1359 aa9.31□□□□□ -0.92
NECAP1-227ENST00000640648 CD109Q6YHK3 1445 aa9.31□□□□□ -0.92
NECAP1-227ENST00000640648 KRT86O43790 486 aa9.31□□□□□ -0.92
NECAP1-227ENST00000640648 FGFR1OPO95684 399 aaKnown RBP9.31□□□□□ -0.92
NECAP1-227ENST00000640648 LMNAP02545 664 aaKnown RBP9.31□□□□□ -0.92
NECAP1-227ENST00000640648 SLC3A2P08195 630 aaKnown RBP9.31□□□□□ -0.92
NECAP1-227ENST00000640648 PDE6BP35913 854 aa9.31□□□□□ -0.92
NECAP1-227ENST00000640648 KCNJ6P48051 423 aa9.31□□□□□ -0.92
NECAP1-227ENST00000640648 LARP1Q6PKG0 1096 aaKnown RBP9.31□□□□□ -0.92
NECAP1-227ENST00000640648 CCDC80Q76M96 950 aa9.31□□□□□ -0.92
NECAP1-227ENST00000640648 MAATS1Q7Z4T9 603 aa9.31□□□□□ -0.92
NECAP1-227ENST00000640648 TUBA8Q9NY65 449 aaPredicted RBP9.31□□□□□ -0.92
NECAP1-227ENST00000640648 F13A1P00488 732 aa9.31□□□□□ -0.92
NECAP1-227ENST00000640648 LIG3P49916 1009 aa9.31□□□□□ -0.92
NECAP1-227ENST00000640648 CAPRIN2Q6IMN6 1127 aaKnown RBP9.31□□□□□ -0.92
NECAP1-227ENST00000640648 USP6NLQ92738 828 aa9.31□□□□□ -0.92
NECAP1-227ENST00000640648 CCDC51Q96ER9 411 aa9.31□□□□□ -0.92
NECAP1-227ENST00000640648 CARD10Q9BWT7 1032 aa9.31□□□□□ -0.92
NECAP1-227ENST00000640648 SCOCQ9UIL1 159 aa9.31□□□□□ -0.92
NECAP1-227ENST00000640648 MAP3K2Q9Y2U5 619 aa9.31□□□□□ -0.92
NECAP1-227ENST00000640648 IFIT1P09914 478 aaKnown RBP9.3□□□□□ -0.92
NECAP1-227ENST00000640648 TTC19Q6DKK2 380 aaPredicted RBP9.3□□□□□ -0.92
NECAP1-227ENST00000640648 HOOK3Q86VS8 718 aa9.3□□□□□ -0.92
NECAP1-227ENST00000640648 SMC1BQ8NDV3 1235 aa9.3□□□□□ -0.92
NECAP1-227ENST00000640648 EVI5LQ96CN4 794 aa9.3□□□□□ -0.92
NECAP1-227ENST00000640648 PHAXQ9H814 394 aaKnown RBP9.3□□□□□ -0.92
NECAP1-227ENST00000640648 PLCB1Q9NQ66 1216 aa9.3□□□□□ -0.92
NECAP1-227ENST00000640648 DBF4Q9UBU7 674 aaPredicted RBP9.3□□□□□ -0.92
NECAP1-227ENST00000640648 TRIM35Q9UPQ4 493 aa9.3□□□□□ -0.92
NECAP1-227ENST00000640648 RIPOR2Q9Y4F9 1068 aa9.3□□□□□ -0.92
NECAP1-227ENST00000640648 KDM5BQ9UGL1 1544 aa9.3□□□□□ -0.92
NECAP1-227ENST00000640648 ZBTB7BO15156 539 aaPredicted RBP9.3□□□□□ -0.92
NECAP1-227ENST00000640648 TOM1L2Q6ZVM7 507 aa9.3□□□□□ -0.92
NECAP1-227ENST00000640648 BCAS4Q8TDM0 211 aa9.3□□□□□ -0.92
NECAP1-227ENST00000640648 WASF1Q92558 559 aa9.3□□□□□ -0.92
NECAP1-227ENST00000640648 CALR3Q96L12 384 aaKnown RBP9.3□□□□□ -0.92
NECAP1-227ENST00000640648 NAPGQ99747 312 aaPredicted RBP9.3□□□□□ -0.92
NECAP1-227ENST00000640648 USP26Q9BXU7 913 aa9.3□□□□□ -0.92
NECAP1-227ENST00000640648 SPATA31E1Q6ZUB1 1445 aa9.3□□□□□ -0.92
NECAP1-227ENST00000640648 POLR3DP05423 398 aaPredicted RBP9.3□□□□□ -0.92
NECAP1-227ENST00000640648 EPS15P42566 896 aa9.3□□□□□ -0.92
NECAP1-227ENST00000640648 UBASH3AP57075 661 aa9.3□□□□□ -0.92
NECAP1-227ENST00000640648 MAP7D1Q3KQU3 841 aa9.3□□□□□ -0.92
NECAP1-227ENST00000640648 ACBD5Q5T8D3 534 aaPredicted RBP9.3□□□□□ -0.92
NECAP1-227ENST00000640648 MIER3Q7Z3K6 550 aa9.3□□□□□ -0.92
NECAP1-227ENST00000640648 CNGA4Q8IV77 575 aa9.3□□□□□ -0.92
NECAP1-227ENST00000640648 STMN2Q93045 179 aa9.3□□□□□ -0.92
NECAP1-227ENST00000640648 ITFG2Q969R8 447 aa9.3□□□□□ -0.92
NECAP1-227ENST00000640648 HOOK2Q96ED9 719 aa9.3□□□□□ -0.92
NECAP1-227ENST00000640648 ARHGEF12Q9NZN5 1544 aa9.3□□□□□ -0.92
NECAP1-227ENST00000640648 TSKSQ9UJT2 592 aa9.3□□□□□ -0.92
NECAP1-227ENST00000640648 FANCAO15360 1455 aa9.3□□□□□ -0.92
NECAP1-227ENST00000640648 ERBB4Q15303 1308 aa9.3□□□□□ -0.92
NECAP1-227ENST00000640648 WDHD1O75717 1129 aaPredicted RBP9.3□□□□□ -0.92
NECAP1-227ENST00000640648 JAKMIP2Q96AA8 810 aa9.3□□□□□ -0.92
NECAP1-227ENST00000640648 SPAG5Q96R06 1193 aa9.3□□□□□ -0.92
NECAP1-227ENST00000640648 NACAP1Q9BZK3 213 aa9.3□□□□□ -0.92
NECAP1-227ENST00000640648 SNRKQ9NRH2 765 aa9.3□□□□□ -0.92
NECAP1-227ENST00000640648 DACT1Q9NYF0 836 aa9.3□□□□□ -0.92
NECAP1-227ENST00000640648 ACEP12821 1306 aa9.29□□□□□ -0.92
NECAP1-227ENST00000640648 RASSF10A6NK89 507 aa9.29□□□□□ -0.92
NECAP1-227ENST00000640648 FOXO3O43524 673 aa9.29□□□□□ -0.92
NECAP1-227ENST00000640648 HAND2P61296 217 aa9.29□□□□□ -0.92
NECAP1-227ENST00000640648 CTTNBP2Q8WZ74 1663 aa9.29□□□□□ -0.92
NECAP1-227ENST00000640648 A2MP01023 1474 aa9.29□□□□□ -0.92
NECAP1-227ENST00000640648 PRC1O43663 620 aa9.29□□□□□ -0.92
NECAP1-227ENST00000640648 CPA1P15085 419 aa9.29□□□□□ -0.92
NECAP1-227ENST00000640648 TRIM21P19474 475 aaKnown RBP9.29□□□□□ -0.92
NECAP1-227ENST00000640648 E2F4Q16254 413 aa9.29□□□□□ -0.92
NECAP1-227ENST00000640648 NAA16Q6N069 864 aaPredicted RBP9.29□□□□□ -0.92
NECAP1-227ENST00000640648 GAS2L3Q86XJ1 694 aa9.29□□□□□ -0.92
NECAP1-227ENST00000640648 IQUBQ8NA54 791 aa9.29□□□□□ -0.92
NECAP1-227ENST00000640648 CNNM3Q8NE01 707 aa9.29□□□□□ -0.92
NECAP1-227ENST00000640648 BRF1Q92994 677 aa9.29□□□□□ -0.92
NECAP1-227ENST00000640648 PUS7Q96PZ0 661 aaKnown RBP9.29□□□□□ -0.92
NECAP1-227ENST00000640648 UHRF1BP1Q6BDS2 1440 aa9.29□□□□□ -0.92
NECAP1-227ENST00000640648 ATP5J2-PTCD1G3V325 749 aa9.29□□□□□ -0.92
NECAP1-227ENST00000640648 TULP2O00295 520 aa9.29□□□□□ -0.92
NECAP1-227ENST00000640648 CCDC96Q2M329 555 aa9.29□□□□□ -0.92
NECAP1-227ENST00000640648 GKAP1Q5VSY0 366 aaPredicted RBP9.29□□□□□ -0.92
NECAP1-227ENST00000640648 RCSD1Q6JBY9 416 aa9.29□□□□□ -0.92
NECAP1-227ENST00000640648 SEC62Q99442 399 aaKnown RBP9.29□□□□□ -0.92
NECAP1-227ENST00000640648 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.29□□□□□ -0.92
NECAP1-227ENST00000640648 CARD6Q9BX69 1037 aa9.29□□□□□ -0.92
NECAP1-227ENST00000640648 ADAM21Q9UKJ8 722 aa9.29□□□□□ -0.92
NECAP1-227ENST00000640648 A0A087WZG4 1122 aa9.29□□□□□ -0.92
NECAP1-227ENST00000640648 CFAP73A6NFT4 308 aa9.29□□□□□ -0.92
NECAP1-227ENST00000640648 CCDC68Q9H2F9 335 aa9.29□□□□□ -0.92
NECAP1-227ENST00000640648 RRP36Q96EU6 259 aaKnown RBP9.28□□□□□ -0.92
NECAP1-227ENST00000640648 SMC6Q96SB8 1091 aa9.28□□□□□ -0.92
NECAP1-227ENST00000640648 UBAC1Q9BSL1 405 aa9.28□□□□□ -0.92
NECAP1-227ENST00000640648 RBM8AQ9Y5S9 174 aaKnown RBP9.28□□□□□ -0.92
NECAP1-227ENST00000640648 GOLGA8BA8MQT2 603 aa9.28□□□□□ -0.92
NECAP1-227ENST00000640648 EIF4A2Q14240 407 aaKnown RBP9.28□□□□□ -0.92
NECAP1-227ENST00000640648 IFT20Q8IY31 132 aa9.28□□□□□ -0.92
NECAP1-227ENST00000640648 KCNG4Q8TDN1 519 aa9.28□□□□□ -0.92
NECAP1-227ENST00000640648 CPLX3Q8WVH0 158 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms