RNA–Protein interactions for RNA: ENST00000640463.1

SPIN3-239, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 3,133 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-239ENST00000640463 ITGA6P23229 1130 aa16.23■□□□□ 0.19
SPIN3-239ENST00000640463 EVA1CP58658 441 aa16.23■□□□□ 0.19
SPIN3-239ENST00000640463 SYNE3Q6ZMZ3 975 aa16.23■□□□□ 0.19
SPIN3-239ENST00000640463 TBC1D10CQ8IV04 446 aa16.23■□□□□ 0.19
SPIN3-239ENST00000640463 FBXL16Q8N461 479 aa16.23■□□□□ 0.19
SPIN3-239ENST00000640463 ZBTB38Q8NAP3 1195 aaPredicted RBP16.23■□□□□ 0.19
SPIN3-239ENST00000640463 SPEF2Q9C093 1822 aa16.23■□□□□ 0.19
SPIN3-239ENST00000640463 CNNM1Q9NRU3 951 aa16.23■□□□□ 0.19
SPIN3-239ENST00000640463 KIAA1468Q9P260 1216 aa16.23■□□□□ 0.19
SPIN3-239ENST00000640463 MYO5AQ9Y4I1 1855 aaKnown RBP16.23■□□□□ 0.19
SPIN3-239ENST00000640463 DHX16O60231 1041 aaKnown RBP16.23■□□□□ 0.19
SPIN3-239ENST00000640463 CSF1RP07333 972 aa16.23■□□□□ 0.19
SPIN3-239ENST00000640463 CYB5R4Q7L1T6 521 aa16.23■□□□□ 0.19
SPIN3-239ENST00000640463 COL5A2P05997 1499 aaPredicted RBP16.22■□□□□ 0.19
SPIN3-239ENST00000640463 U2AF2P26368 475 aaKnown RBP eCLIP16.22■□□□□ 0.198e-6■■■■□ 19.7
SPIN3-239ENST00000640463 ZRSR1Q15695 479 aaKnown RBP16.22■□□□□ 0.19
SPIN3-239ENST00000640463 TICAM2Q86XR7 235 aa16.22■□□□□ 0.19
SPIN3-239ENST00000640463 PHKBQ93100 1093 aa16.22■□□□□ 0.19
SPIN3-239ENST00000640463 PIH1D3Q9NQM4 214 aaKnown RBP16.22■□□□□ 0.19
SPIN3-239ENST00000640463 RIPOR2Q9Y4F9 1068 aa16.22■□□□□ 0.19
SPIN3-239ENST00000640463 PLEKHG2Q9H7P9 1386 aa16.22■□□□□ 0.19
SPIN3-239ENST00000640463 A0A1W2PQ27 194 aa16.22■□□□□ 0.19
SPIN3-239ENST00000640463 A0A1W2PQ64 194 aa16.22■□□□□ 0.19
SPIN3-239ENST00000640463 A0A1W2PQD8 194 aa16.22■□□□□ 0.19
SPIN3-239ENST00000640463 SMTNL1A8MU46 457 aa16.22■□□□□ 0.19
SPIN3-239ENST00000640463 KIF23Q02241 960 aaPredicted RBP16.22■□□□□ 0.19
SPIN3-239ENST00000640463 NCBP1Q09161 790 aaKnown RBP16.22■□□□□ 0.19
SPIN3-239ENST00000640463 KCNG4Q8TDN1 519 aa16.22■□□□□ 0.19
SPIN3-239ENST00000640463 PIGBQ92521 554 aa16.22■□□□□ 0.19
SPIN3-239ENST00000640463 DCCP43146 1447 aa16.22■□□□□ 0.19
SPIN3-239ENST00000640463 RIC1Q4ADV7 1423 aa16.22■□□□□ 0.19
SPIN3-239ENST00000640463 NEDD4P46934 1319 aa16.21■□□□□ 0.19
SPIN3-239ENST00000640463 WDHD1O75717 1129 aaPredicted RBP16.21■□□□□ 0.19
SPIN3-239ENST00000640463 ZNF202O95125 648 aa16.21■□□□□ 0.19
SPIN3-239ENST00000640463 CCZ1BP86790 482 aa16.21■□□□□ 0.19
SPIN3-239ENST00000640463 CCZ1P86791 482 aaPredicted RBP16.21■□□□□ 0.19
SPIN3-239ENST00000640463 CEP135Q66GS9 1140 aa16.21■□□□□ 0.19
SPIN3-239ENST00000640463 HELBQ8NG08 1087 aaPredicted RBP16.21■□□□□ 0.19
SPIN3-239ENST00000640463 ANKRD7Q92527 254 aa16.21■□□□□ 0.19
SPIN3-239ENST00000640463 NAT10Q9H0A0 1025 aaKnown RBP16.21■□□□□ 0.19
SPIN3-239ENST00000640463 POLR3EQ9NVU0 708 aa16.21■□□□□ 0.19
SPIN3-239ENST00000640463 UBE2Q2LH0YL09 131 aa16.21■□□□□ 0.19
SPIN3-239ENST00000640463 ANO1Q5XXA6 986 aa16.21■□□□□ 0.19
SPIN3-239ENST00000640463 NBPF11Q86T75 865 aa16.21■□□□□ 0.19
SPIN3-239ENST00000640463 TTLL11Q8NHH1 800 aa16.21■□□□□ 0.19
SPIN3-239ENST00000640463 CHMP4CQ96CF2 233 aa16.21■□□□□ 0.19
SPIN3-239ENST00000640463 MYL10Q9BUA6 226 aa16.21■□□□□ 0.19
SPIN3-239ENST00000640463 CARD10Q9BWT7 1032 aa16.21■□□□□ 0.19
SPIN3-239ENST00000640463 B4E1Z4 1266 aa16.21■□□□□ 0.18
SPIN3-239ENST00000640463 SMC2O95347 1197 aa16.21■□□□□ 0.18
SPIN3-239ENST00000640463 ADD2P35612 726 aa16.21■□□□□ 0.18
SPIN3-239ENST00000640463 TRDNQ13061 729 aa16.21■□□□□ 0.18
SPIN3-239ENST00000640463 MICU3Q86XE3 530 aa16.21■□□□□ 0.18
SPIN3-239ENST00000640463 CCDC112Q8NEF3 446 aa16.21■□□□□ 0.18
SPIN3-239ENST00000640463 MYH7P12883 1935 aa16.2■□□□□ 0.18
SPIN3-239ENST00000640463 MROH7-TTC4A0A0A0MT08 1334 aa16.2■□□□□ 0.18
SPIN3-239ENST00000640463 YEATS4O95619 227 aa16.2■□□□□ 0.18
SPIN3-239ENST00000640463 SLC3A2P08195 630 aaKnown RBP16.2■□□□□ 0.18
SPIN3-239ENST00000640463 PFKFB1P16118 471 aa16.2■□□□□ 0.18
SPIN3-239ENST00000640463 TNS2Q63HR2 1409 aa16.2■□□□□ 0.18
SPIN3-239ENST00000640463 AKAP11Q9UKA4 1901 aa16.2■□□□□ 0.18
SPIN3-239ENST00000640463 CDC27P30260 824 aa16.2■□□□□ 0.18
SPIN3-239ENST00000640463 PHKA1P46020 1223 aa16.2■□□□□ 0.18
SPIN3-239ENST00000640463 TRIM28Q13263 835 aaKnown RBP16.2■□□□□ 0.18
SPIN3-239ENST00000640463 AXDND1Q5T1B0 1012 aaPredicted RBP16.2■□□□□ 0.18
SPIN3-239ENST00000640463 ALG1Q9BT22 464 aa16.2■□□□□ 0.18
SPIN3-239ENST00000640463 XPO4Q9C0E2 1151 aaKnown RBP16.2■□□□□ 0.18
SPIN3-239ENST00000640463 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.2■□□□□ 0.18
SPIN3-239ENST00000640463 IFNKQ9P0W0 207 aa16.2■□□□□ 0.18
SPIN3-239ENST00000640463 WWC3Q9ULE0 1092 aa16.2■□□□□ 0.18
SPIN3-239ENST00000640463 ZNF532Q9HCE3 1301 aa16.19■□□□□ 0.18
SPIN3-239ENST00000640463 SNAP23O00161 211 aa16.19■□□□□ 0.18
SPIN3-239ENST00000640463 METAP2P50579 478 aaKnown RBP eCLIP16.19■□□□□ 0.18
SPIN3-239ENST00000640463 RBM6P78332 1123 aaKnown RBP16.19■□□□□ 0.18
SPIN3-239ENST00000640463 BRAPQ7Z569 592 aa16.19■□□□□ 0.18
SPIN3-239ENST00000640463 NLRP10Q86W26 655 aa16.19■□□□□ 0.18
SPIN3-239ENST00000640463 SYTL4Q96C24 671 aaPredicted RBP16.19■□□□□ 0.18
SPIN3-239ENST00000640463 FBXO3Q9UK99 471 aa16.19■□□□□ 0.18
SPIN3-239ENST00000640463 GIGYF2Q6Y7W6 1299 aaKnown RBP16.19■□□□□ 0.18
SPIN3-239ENST00000640463 PLA2G12BQ9BX93 195 aa16.19■□□□□ 0.18
SPIN3-239ENST00000640463 ANGEL1Q9UNK9 670 aaKnown RBP16.19■□□□□ 0.18
SPIN3-239ENST00000640463 PAPPAQ13219 1627 aa16.19■□□□□ 0.18
SPIN3-239ENST00000640463 PTPN14Q15678 1187 aa16.19■□□□□ 0.18
SPIN3-239ENST00000640463 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.19■□□□□ 0.18
SPIN3-239ENST00000640463 V9GYY5 206 aaPredicted RBP16.19■□□□□ 0.18
SPIN3-239ENST00000640463 MAP3K15Q6ZN16 1313 aa16.18■□□□□ 0.18
SPIN3-239ENST00000640463 ANKRD18BA2A2Z9 1011 aa16.18■□□□□ 0.18
SPIN3-239ENST00000640463 TMC6Q7Z403 805 aa16.18■□□□□ 0.18
SPIN3-239ENST00000640463 STK11IPQ8N1F8 1099 aa16.18■□□□□ 0.18
SPIN3-239ENST00000640463 IRS4O14654 1257 aaPredicted RBP16.18■□□□□ 0.18
SPIN3-239ENST00000640463 VPS37DQ86XT2 251 aa16.18■□□□□ 0.18
SPIN3-239ENST00000640463 TRMT112Q9UI30 125 aaKnown RBP16.18■□□□□ 0.18
SPIN3-239ENST00000640463 PAXBP1Q9Y5B6 917 aa16.18■□□□□ 0.18
SPIN3-239ENST00000640463 SHANK3Q9BYB0 1731 aa16.18■□□□□ 0.18
SPIN3-239ENST00000640463 NEMFO60524 1076 aa16.17■□□□□ 0.18
SPIN3-239ENST00000640463 STARD3NLO95772 234 aa16.17■□□□□ 0.18
SPIN3-239ENST00000640463 LMOD1P29536 600 aaPredicted RBP16.17■□□□□ 0.18
SPIN3-239ENST00000640463 GNL2Q13823 731 aaKnown RBP16.17■□□□□ 0.18
SPIN3-239ENST00000640463 CCDC102BQ68D86 513 aa16.17■□□□□ 0.18
SPIN3-239ENST00000640463 KRT40Q6A162 431 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms