RNA–Protein interactions for RNA: ENST00000640388.1

ATM-230, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5 BASIC

Gene ATM, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-230ENST00000640388 EAPPQ56P03 285 aaPredicted RBP5.67□□□□□ -1.5
ATM-230ENST00000640388 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.67□□□□□ -1.5
ATM-230ENST00000640388 USP26Q9BXU7 913 aa5.67□□□□□ -1.5
ATM-230ENST00000640388 ZNF576Q9H609 170 aa5.67□□□□□ -1.5
ATM-230ENST00000640388 GLB1P16278 677 aa5.66□□□□□ -1.5
ATM-230ENST00000640388 ZNF157P51786 506 aaPredicted RBP5.66□□□□□ -1.5
ATM-230ENST00000640388 PTPN12Q05209 780 aaKnown RBP5.66□□□□□ -1.5
ATM-230ENST00000640388 LCE3BQ5TA77 95 aa5.66□□□□□ -1.5
ATM-230ENST00000640388 KIAA1211Q6ZU35 1233 aa5.66□□□□□ -1.5
ATM-230ENST00000640388 NBPF11Q86T75 865 aa5.66□□□□□ -1.5
ATM-230ENST00000640388 NPAS4Q8IUM7 802 aa5.66□□□□□ -1.5
ATM-230ENST00000640388 TP53INP1Q96A56 240 aa5.66□□□□□ -1.5
ATM-230ENST00000640388 OSBPL7Q9BZF2 842 aa5.66□□□□□ -1.5
ATM-230ENST00000640388 SOX17Q9H6I2 414 aaPredicted RBP5.66□□□□□ -1.5
ATM-230ENST00000640388 AKAP2Q9Y2D5 859 aa5.66□□□□□ -1.5
ATM-230ENST00000640388 HYAL3O43820 417 aaPredicted RBP5.65□□□□□ -1.5
ATM-230ENST00000640388 B3GALT4O96024 378 aa5.65□□□□□ -1.5
ATM-230ENST00000640388 COL19A1Q14993 1142 aa5.65□□□□□ -1.5
ATM-230ENST00000640388 SLC51AQ86UW1 340 aa5.65□□□□□ -1.5
ATM-230ENST00000640388 DDX54Q8TDD1 881 aaKnown RBP5.65□□□□□ -1.5
ATM-230ENST00000640388 MEGF10Q96KG7 1140 aa5.65□□□□□ -1.5
ATM-230ENST00000640388 RNF112Q9ULX5 631 aa5.65□□□□□ -1.5
ATM-230ENST00000640388 SPG7Q9UQ90 795 aa5.65□□□□□ -1.5
ATM-230ENST00000640388 RIMBP3CA6NJZ7 1639 aa5.64□□□□□ -1.51
ATM-230ENST00000640388 RIMBP3BA6NNM3 1639 aa5.64□□□□□ -1.51
ATM-230ENST00000640388 RIMBP3Q9UFD9 1639 aa5.64□□□□□ -1.51
ATM-230ENST00000640388 BTBD11A6QL63 1104 aa5.64□□□□□ -1.51
ATM-230ENST00000640388 PRPF40AO75400 957 aaKnown RBP5.64□□□□□ -1.51
ATM-230ENST00000640388 XRCC5P13010 732 aaKnown RBP5.64□□□□□ -1.51
ATM-230ENST00000640388 FAAP100Q0VG06 881 aa5.64□□□□□ -1.51
ATM-230ENST00000640388 RPS26P11Q5JNZ5 115 aaPredicted RBP5.64□□□□□ -1.51
ATM-230ENST00000640388 TMCO4Q5TGY1 634 aa5.64□□□□□ -1.51
ATM-230ENST00000640388 DUSP9Q99956 384 aaKnown RBP5.64□□□□□ -1.51
ATM-230ENST00000640388 RUSC1Q9BVN2 902 aa5.64□□□□□ -1.51
ATM-230ENST00000640388 SRCIN1Q9C0H9 1055 aa5.64□□□□□ -1.51
ATM-230ENST00000640388 ZFYVE1Q9HBF4 777 aa5.64□□□□□ -1.51
ATM-230ENST00000640388 ERCC6Q03468 1493 aa5.64□□□□□ -1.51
ATM-230ENST00000640388 LOC100289279A0A1B0GTE1 492 aa5.63□□□□□ -1.51
ATM-230ENST00000640388 GIPC1O14908 333 aa5.63□□□□□ -1.51
ATM-230ENST00000640388 EIF4EBP3O60516 100 aaPredicted RBP5.63□□□□□ -1.51
ATM-230ENST00000640388 DLGAP3O95886 979 aa5.63□□□□□ -1.51
ATM-230ENST00000640388 CYP11A1P05108 521 aa5.63□□□□□ -1.51
ATM-230ENST00000640388 ERCC3P19447 782 aa5.63□□□□□ -1.51
ATM-230ENST00000640388 MAOBP27338 520 aa5.63□□□□□ -1.51
ATM-230ENST00000640388 GSTT1P30711 240 aa5.63□□□□□ -1.51
ATM-230ENST00000640388 FGD1P98174 961 aa5.63□□□□□ -1.51
ATM-230ENST00000640388 POU4F3Q15319 338 aa5.63□□□□□ -1.51
ATM-230ENST00000640388 DZIP1LQ8IYY4 767 aaKnown RBP5.63□□□□□ -1.51
ATM-230ENST00000640388 CEP41Q9BYV8 373 aa5.63□□□□□ -1.51
ATM-230ENST00000640388 RNF208Q9H0X6 261 aa5.63□□□□□ -1.51
ATM-230ENST00000640388 RNF19AQ9NV58 838 aa5.63□□□□□ -1.51
ATM-230ENST00000640388 GPN3Q9UHW5 284 aaPredicted RBP5.63□□□□□ -1.51
ATM-230ENST00000640388 CCDC180Q9P1Z9 1646 aa5.63□□□□□ -1.51
ATM-230ENST00000640388 GNA15P30679 374 aa5.62□□□□□ -1.51
ATM-230ENST00000640388 TRIM26Q12899 539 aaPredicted RBP5.62□□□□□ -1.51
ATM-230ENST00000640388 NUTM2GQ5VZR2 741 aa5.62□□□□□ -1.51
ATM-230ENST00000640388 Q6ZS46 218 aa5.62□□□□□ -1.51
ATM-230ENST00000640388 C3orf58Q8NDZ4 430 aa5.62□□□□□ -1.51
ATM-230ENST00000640388 UBL7Q96S82 380 aaPredicted RBP5.62□□□□□ -1.51
ATM-230ENST00000640388 CORO1BQ9BR76 489 aa5.62□□□□□ -1.51
ATM-230ENST00000640388 TRIM56Q9BRZ2 755 aaKnown RBP5.62□□□□□ -1.51
ATM-230ENST00000640388 NRSN2Q9GZP1 204 aa5.62□□□□□ -1.51
ATM-230ENST00000640388 C12orf49Q9H741 205 aa5.62□□□□□ -1.51
ATM-230ENST00000640388 TMEM39AQ9NV64 488 aa5.62□□□□□ -1.51
ATM-230ENST00000640388 MEGF11A6BM72 1044 aa5.61□□□□□ -1.51
ATM-230ENST00000640388 SART1O43290 800 aaKnown RBP5.61□□□□□ -1.51
ATM-230ENST00000640388 ECEL1O95672 775 aa5.61□□□□□ -1.51
ATM-230ENST00000640388 CTSBP07858 339 aa5.61□□□□□ -1.51
ATM-230ENST00000640388 USP17L7P0C7H9 530 aa5.61□□□□□ -1.51
ATM-230ENST00000640388 TAGLNQ01995 201 aaKnown RBP5.61□□□□□ -1.51
ATM-230ENST00000640388 EIF4G1Q04637 1599 aaKnown RBP5.61□□□□□ -1.51
ATM-230ENST00000640388 PPP2R3AQ06190 1150 aa5.61□□□□□ -1.51
ATM-230ENST00000640388 EXOSC6Q5RKV6 272 aaKnown RBP5.61□□□□□ -1.51
ATM-230ENST00000640388 FDX2Q6P4F2 183 aa5.61□□□□□ -1.51
ATM-230ENST00000640388 TPTE2Q6XPS3 522 aa5.61□□□□□ -1.51
ATM-230ENST00000640388 FBXO33Q7Z6M2 555 aa5.61□□□□□ -1.51
ATM-230ENST00000640388 FRMD6Q96NE9 622 aa5.61□□□□□ -1.51
ATM-230ENST00000640388 TMPRSS13Q9BYE2 586 aa5.61□□□□□ -1.51
ATM-230ENST00000640388 FAM8A1Q9UBU6 413 aa5.61□□□□□ -1.51
ATM-230ENST00000640388 PARP2Q9UGN5 583 aa5.61□□□□□ -1.51
ATM-230ENST00000640388 FBXO24O75426 580 aa5.6□□□□□ -1.51
ATM-230ENST00000640388 EIF4BP23588 611 aaKnown RBP5.6□□□□□ -1.51
ATM-230ENST00000640388 XPCQ01831 940 aaPredicted RBP5.6□□□□□ -1.51
ATM-230ENST00000640388 AP3B2Q13367 1082 aa5.6□□□□□ -1.51
ATM-230ENST00000640388 ANKRD34AQ69YU3 496 aa5.6□□□□□ -1.51
ATM-230ENST00000640388 PRR23CQ6ZRP0 262 aa5.6□□□□□ -1.51
ATM-230ENST00000640388 C12orf50Q8NA57 414 aaPredicted RBP5.6□□□□□ -1.51
ATM-230ENST00000640388 ZC3H12CQ9C0D7 883 aaKnown RBP5.6□□□□□ -1.51
ATM-230ENST00000640388 CYP4F12Q9HCS2 524 aa5.6□□□□□ -1.51
ATM-230ENST00000640388 AK5Q9Y6K8 562 aa5.6□□□□□ -1.51
ATM-230ENST00000640388 DRD2P14416 443 aa5.59□□□□□ -1.51
ATM-230ENST00000640388 PREPP48147 710 aa5.59□□□□□ -1.51
ATM-230ENST00000640388 MFAP1P55081 439 aaKnown RBP5.59□□□□□ -1.51
ATM-230ENST00000640388 PSMD2Q13200 908 aa5.59□□□□□ -1.51
ATM-230ENST00000640388 PDE3AQ14432 1141 aa5.59□□□□□ -1.51
ATM-230ENST00000640388 UTP4Q969X6 686 aaKnown RBP5.59□□□□□ -1.51
ATM-230ENST00000640388 FAM46AQ96IP4 442 aaKnown RBP5.59□□□□□ -1.51
ATM-230ENST00000640388 FAM161BQ96MY7 647 aa5.59□□□□□ -1.51
ATM-230ENST00000640388 RAD18Q9NS91 495 aa5.59□□□□□ -1.51
ATM-230ENST00000640388 DAB2P98082 770 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms