RNA–Protein interactions for RNA: ENST00000640135.1

SCN1B-208, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1B, Length 4,846 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-208ENST00000640135 LARP6Q9BRS8 491 aaKnown RBP12.55□□□□□ -0.4
SCN1B-208ENST00000640135 ZBED4O75132 1171 aa12.55□□□□□ -0.4
SCN1B-208ENST00000640135 RUFY3Q7L099 469 aa12.55□□□□□ -0.4
SCN1B-208ENST00000640135 PHACTR2O75167 634 aa12.55□□□□□ -0.4
SCN1B-208ENST00000640135 RRAGBQ5VZM2 374 aa12.55□□□□□ -0.4
SCN1B-208ENST00000640135 TRMT1LQ7Z2T5 733 aaKnown RBP12.55□□□□□ -0.4
SCN1B-208ENST00000640135 C2CD5Q86YS7 1000 aa12.55□□□□□ -0.4
SCN1B-208ENST00000640135 FAM177A1Q8N128 213 aaPredicted RBP12.55□□□□□ -0.4
SCN1B-208ENST00000640135 AS3MTQ9HBK9 375 aa12.55□□□□□ -0.4
SCN1B-208ENST00000640135 WWC3Q9ULE0 1092 aa12.55□□□□□ -0.4
SCN1B-208ENST00000640135 MAP3K15Q6ZN16 1313 aa12.55□□□□□ -0.4
SCN1B-208ENST00000640135 UVSSAQ2YD98 709 aa12.54□□□□□ -0.4
SCN1B-208ENST00000640135 DTHD1Q6ZMT9 781 aa12.54□□□□□ -0.4
SCN1B-208ENST00000640135 IL17REQ8NFR9 667 aa12.54□□□□□ -0.4
SCN1B-208ENST00000640135 BIN2Q9UBW5 565 aaPredicted RBP12.54□□□□□ -0.4
SCN1B-208ENST00000640135 RLBP1P12271 317 aa12.54□□□□□ -0.4
SCN1B-208ENST00000640135 ZNF165P49910 485 aa12.54□□□□□ -0.4
SCN1B-208ENST00000640135 CC2D2BQ6DHV5 1058 aa12.54□□□□□ -0.4
SCN1B-208ENST00000640135 PANK2Q9BZ23 570 aa12.54□□□□□ -0.4
SCN1B-208ENST00000640135 KDRP35968 1356 aa12.54□□□□□ -0.4
SCN1B-208ENST00000640135 USP6P35125 1406 aa12.54□□□□□ -0.4
SCN1B-208ENST00000640135 USP8P40818 1118 aa12.54□□□□□ -0.4
SCN1B-208ENST00000640135 ASIC1P78348 528 aa12.54□□□□□ -0.4
SCN1B-208ENST00000640135 BCS1LQ9Y276 419 aa12.54□□□□□ -0.4
SCN1B-208ENST00000640135 SPTLC2O15270 562 aa12.54□□□□□ -0.4
SCN1B-208ENST00000640135 FAM13AO94988 1023 aa12.54□□□□□ -0.4
SCN1B-208ENST00000640135 DEXIO95424 95 aa12.54□□□□□ -0.4
SCN1B-208ENST00000640135 MCTP2Q6DN12 878 aa12.54□□□□□ -0.4
SCN1B-208ENST00000640135 SLC5A4Q9NY91 659 aa12.54□□□□□ -0.4
SCN1B-208ENST00000640135 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.54□□□□□ -0.4
SCN1B-208ENST00000640135 BACH1O14867 736 aa12.53□□□□□ -0.4
SCN1B-208ENST00000640135 GPAA1O43292 621 aa12.53□□□□□ -0.4
SCN1B-208ENST00000640135 PABPC4Q13310 644 aaKnown RBP eCLIP12.53□□□□□ -0.4
SCN1B-208ENST00000640135 EHBP1Q8NDI1 1231 aa12.53□□□□□ -0.4
SCN1B-208ENST00000640135 SPAG5Q96R06 1193 aa12.53□□□□□ -0.4
SCN1B-208ENST00000640135 TAOK3Q9H2K8 898 aa12.53□□□□□ -0.4
SCN1B-208ENST00000640135 CWC15Q9P013 229 aaKnown RBP12.53□□□□□ -0.4
SCN1B-208ENST00000640135 ROBO2Q9HCK4 1378 aa12.53□□□□□ -0.4
SCN1B-208ENST00000640135 IGSF1Q8N6C5 1336 aa12.53□□□□□ -0.4
SCN1B-208ENST00000640135 BICDL2A1A5D9 508 aa12.53□□□□□ -0.4
SCN1B-208ENST00000640135 N4BP3O15049 544 aa12.53□□□□□ -0.4
SCN1B-208ENST00000640135 CLIP2Q9UDT6 1046 aa12.53□□□□□ -0.4
SCN1B-208ENST00000640135 CSADQ9Y600 493 aa12.53□□□□□ -0.4
SCN1B-208ENST00000640135 CTNNA2P26232 953 aa12.53□□□□□ -0.4
SCN1B-208ENST00000640135 RILPL1Q5EBL4 403 aa12.53□□□□□ -0.4
SCN1B-208ENST00000640135 HOOK3Q86VS8 718 aa12.53□□□□□ -0.4
SCN1B-208ENST00000640135 LRRC45Q96CN5 670 aa12.53□□□□□ -0.4
SCN1B-208ENST00000640135 LLPHQ9BRT6 129 aaKnown RBP12.53□□□□□ -0.4
SCN1B-208ENST00000640135 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.53□□□□□ -0.4
SCN1B-208ENST00000640135 GOPCQ9HD26 462 aa12.53□□□□□ -0.4
SCN1B-208ENST00000640135 ARPP21Q9UBL0 812 aaPredicted RBP12.53□□□□□ -0.4
SCN1B-208ENST00000640135 ATP5JP18859 108 aa12.53□□□□□ -0.4
SCN1B-208ENST00000640135 IQUBQ8NA54 791 aa12.53□□□□□ -0.4
SCN1B-208ENST00000640135 KCNG1Q9UIX4 513 aa12.53□□□□□ -0.4
SCN1B-208ENST00000640135 ANGEL1Q9UNK9 670 aaKnown RBP12.53□□□□□ -0.4
SCN1B-208ENST00000640135 GCC2Q8IWJ2 1684 aa12.52□□□□□ -0.4
SCN1B-208ENST00000640135 MAP3K9P80192 1104 aa12.52□□□□□ -0.4
SCN1B-208ENST00000640135 TCEANC2Q96MN5 208 aa12.52□□□□□ -0.4
SCN1B-208ENST00000640135 GPHNQ9NQX3 736 aaPredicted RBP12.52□□□□□ -0.4
SCN1B-208ENST00000640135 JAG2Q9Y219 1238 aa12.52□□□□□ -0.4
SCN1B-208ENST00000640135 SPATA31E1Q6ZUB1 1445 aa12.52□□□□□ -0.4
SCN1B-208ENST00000640135 SLC1A4P43007 532 aa12.52□□□□□ -0.41
SCN1B-208ENST00000640135 PTPN14Q15678 1187 aa12.52□□□□□ -0.41
SCN1B-208ENST00000640135 NAA15Q9BXJ9 866 aaKnown RBP12.52□□□□□ -0.41
SCN1B-208ENST00000640135 ERBB3P21860 1342 aa12.52□□□□□ -0.41
SCN1B-208ENST00000640135 PTPDC1A2A3K4 754 aa12.52□□□□□ -0.41
SCN1B-208ENST00000640135 SEMA3EO15041 775 aa12.52□□□□□ -0.41
SCN1B-208ENST00000640135 KLHL40Q2TBA0 621 aa12.52□□□□□ -0.41
SCN1B-208ENST00000640135 HAUS3Q68CZ6 603 aa12.52□□□□□ -0.41
SCN1B-208ENST00000640135 UBXN4Q92575 508 aa12.52□□□□□ -0.41
SCN1B-208ENST00000640135 ARMT1Q9H993 441 aa12.52□□□□□ -0.41
SCN1B-208ENST00000640135 SAP30BPQ9UHR5 308 aaKnown RBP12.52□□□□□ -0.41
SCN1B-208ENST00000640135 LEMD3Q9Y2U8 911 aa12.52□□□□□ -0.41
SCN1B-208ENST00000640135 BBOX1O75936 387 aa12.51□□□□□ -0.41
SCN1B-208ENST00000640135 PLCD1P51178 756 aa12.51□□□□□ -0.41
SCN1B-208ENST00000640135 UBE4AQ14139 1066 aa12.51□□□□□ -0.41
SCN1B-208ENST00000640135 MAP9Q49MG5 647 aa12.51□□□□□ -0.41
SCN1B-208ENST00000640135 MFSD14BQ5SR56 506 aa12.51□□□□□ -0.41
SCN1B-208ENST00000640135 GIGYF2Q6Y7W6 1299 aaKnown RBP12.51□□□□□ -0.41
SCN1B-208ENST00000640135 CHURC1Q8WUH1 139 aa12.51□□□□□ -0.41
SCN1B-208ENST00000640135 TAF5LO75529 589 aa12.51□□□□□ -0.41
SCN1B-208ENST00000640135 F13A1P00488 732 aa12.51□□□□□ -0.41
SCN1B-208ENST00000640135 RPL13P26373 211 aaKnown RBP12.51□□□□□ -0.41
SCN1B-208ENST00000640135 KIF4BQ2VIQ3 1234 aa12.51□□□□□ -0.41
SCN1B-208ENST00000640135 MSANTD4Q8NCY6 345 aa12.51□□□□□ -0.41
SCN1B-208ENST00000640135 ZNF594Q96JF6 807 aaPredicted RBP12.51□□□□□ -0.41
SCN1B-208ENST00000640135 TTC12Q9H892 705 aaPredicted RBP12.51□□□□□ -0.41
SCN1B-208ENST00000640135 GLI2P10070 1586 aa12.51□□□□□ -0.41
SCN1B-208ENST00000640135 BIN1O00499 593 aa12.51□□□□□ -0.41
SCN1B-208ENST00000640135 ACTN2P35609 894 aa12.51□□□□□ -0.41
SCN1B-208ENST00000640135 CRKLP46109 303 aaKnown RBP12.51□□□□□ -0.41
SCN1B-208ENST00000640135 APOBRQ0VD83 1088 aa12.51□□□□□ -0.41
SCN1B-208ENST00000640135 KIF18AQ8NI77 898 aa12.51□□□□□ -0.41
SCN1B-208ENST00000640135 PUF60Q9UHX1 559 aaKnown RBP12.51□□□□□ -0.41
SCN1B-208ENST00000640135 KDM5AP29375 1690 aaKnown RBP12.51□□□□□ -0.41
SCN1B-208ENST00000640135 ZNF335Q9H4Z2 1342 aaPredicted RBP12.51□□□□□ -0.41
SCN1B-208ENST00000640135 LUZP1Q86V48 1076 aa12.51□□□□□ -0.41
SCN1B-208ENST00000640135 ZNF408Q9H9D4 720 aa12.51□□□□□ -0.41
SCN1B-208ENST00000640135 PRPHP41219 470 aa12.5□□□□□ -0.41
SCN1B-208ENST00000640135 IRX3P78415 501 aaPredicted RBP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms