RNA–Protein interactions for RNA: ENST00000640076.1

SCARB2-220, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 1,991 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-220ENST00000640076 ANKRD45Q5TZF3 282 aa9.77□□□□□ -0.84
SCARB2-220ENST00000640076 SKAP1Q86WV1 359 aa9.77□□□□□ -0.84
SCARB2-220ENST00000640076 CCDC24Q8N4L8 307 aa9.77□□□□□ -0.84
SCARB2-220ENST00000640076 PHF12Q96QT6 1004 aa9.77□□□□□ -0.84
SCARB2-220ENST00000640076 TANGO6Q9C0B7 1094 aa9.77□□□□□ -0.84
SCARB2-220ENST00000640076 TNRC6CQ9HCJ0 1690 aaKnown RBP9.77□□□□□ -0.85
SCARB2-220ENST00000640076 TLDC2A0PJX2 215 aa9.77□□□□□ -0.85
SCARB2-220ENST00000640076 USP17L3A6NCW0 530 aa9.77□□□□□ -0.85
SCARB2-220ENST00000640076 USP17L4A6NCW7 530 aa9.77□□□□□ -0.85
SCARB2-220ENST00000640076 SCAMP3O14828 347 aaKnown RBP9.77□□□□□ -0.85
SCARB2-220ENST00000640076 RAB11FIP3O75154 756 aa9.77□□□□□ -0.85
SCARB2-220ENST00000640076 ITGA6P23229 1130 aa9.77□□□□□ -0.85
SCARB2-220ENST00000640076 CCDC152Q4G0S7 254 aa9.77□□□□□ -0.85
SCARB2-220ENST00000640076 CRTC2Q53ET0 693 aaPredicted RBP9.77□□□□□ -0.85
SCARB2-220ENST00000640076 HSP90AB4PQ58FF6 505 aa9.77□□□□□ -0.85
SCARB2-220ENST00000640076 USP17L2Q6R6M4 530 aa9.77□□□□□ -0.85
SCARB2-220ENST00000640076 USP17L1Q7RTZ2 530 aa9.77□□□□□ -0.85
SCARB2-220ENST00000640076 CHD1LQ86WJ1 897 aa9.77□□□□□ -0.85
SCARB2-220ENST00000640076 SLC16A10Q8TF71 515 aa9.77□□□□□ -0.85
SCARB2-220ENST00000640076 PTCD2Q8WV60 388 aaKnown RBP9.77□□□□□ -0.85
SCARB2-220ENST00000640076 NLRP3Q96P20 1036 aa9.77□□□□□ -0.85
SCARB2-220ENST00000640076 USP17L15C9J2P7 530 aa9.76□□□□□ -0.85
SCARB2-220ENST00000640076 USP17L10C9JJH3 530 aa9.76□□□□□ -0.85
SCARB2-220ENST00000640076 USP17L13C9JLJ4 530 aa9.76□□□□□ -0.85
SCARB2-220ENST00000640076 USP17L12C9JPN9 530 aa9.76□□□□□ -0.85
SCARB2-220ENST00000640076 USP17L11C9JVI0 530 aa9.76□□□□□ -0.85
SCARB2-220ENST00000640076 USP17L21D6R901 530 aa9.76□□□□□ -0.85
SCARB2-220ENST00000640076 USP17L18D6R9N7 530 aa9.76□□□□□ -0.85
SCARB2-220ENST00000640076 USP17L22D6RA61 530 aa9.76□□□□□ -0.85
SCARB2-220ENST00000640076 USP17L17D6RBQ6 530 aa9.76□□□□□ -0.85
SCARB2-220ENST00000640076 USP17L19D6RCP7 530 aa9.76□□□□□ -0.85
SCARB2-220ENST00000640076 USP17L20D6RJB6 530 aa9.76□□□□□ -0.85
SCARB2-220ENST00000640076 LZTS3O60299 673 aaPredicted RBP9.76□□□□□ -0.85
SCARB2-220ENST00000640076 ST5P78524 1137 aa9.76□□□□□ -0.85
SCARB2-220ENST00000640076 USP17L24Q0WX57 530 aa9.76□□□□□ -0.85
SCARB2-220ENST00000640076 TYW1BQ6NUM6 668 aa9.76□□□□□ -0.85
SCARB2-220ENST00000640076 PDCD7Q8N8D1 485 aaKnown RBP9.76□□□□□ -0.85
SCARB2-220ENST00000640076 ZNF594Q96JF6 807 aaPredicted RBP9.76□□□□□ -0.85
SCARB2-220ENST00000640076 LRRCC1Q9C099 1032 aa9.76□□□□□ -0.85
SCARB2-220ENST00000640076 SIL1Q9H173 461 aa9.76□□□□□ -0.85
SCARB2-220ENST00000640076 BOLA1Q9Y3E2 137 aa9.76□□□□□ -0.85
SCARB2-220ENST00000640076 PARP3Q9Y6F1 533 aa9.76□□□□□ -0.85
SCARB2-220ENST00000640076 ANKRD18BA2A2Z9 1011 aa9.75□□□□□ -0.85
SCARB2-220ENST00000640076 SCNN1AP37088 669 aa9.75□□□□□ -0.85
SCARB2-220ENST00000640076 G3BP1Q13283 466 aaKnown RBP eCLIP9.75□□□□□ -0.85
SCARB2-220ENST00000640076 OS9Q13438 667 aaPredicted RBP9.75□□□□□ -0.85
SCARB2-220ENST00000640076 ERC1Q8IUD2 1116 aa9.75□□□□□ -0.85
SCARB2-220ENST00000640076 TEX2Q8IWB9 1127 aa9.75□□□□□ -0.85
SCARB2-220ENST00000640076 RHPN1Q8TCX5 695 aa9.75□□□□□ -0.85
SCARB2-220ENST00000640076 ASB16Q96NS5 453 aa9.75□□□□□ -0.85
SCARB2-220ENST00000640076 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.75□□□□□ -0.85
SCARB2-220ENST00000640076 RIPOR2Q9Y4F9 1068 aa9.75□□□□□ -0.85
SCARB2-220ENST00000640076 PPME1Q9Y570 386 aa9.75□□□□□ -0.85
SCARB2-220ENST00000640076 LRP5O75197 1615 aa9.75□□□□□ -0.85
SCARB2-220ENST00000640076 ANKRD31Q8N7Z5 1873 aa9.75□□□□□ -0.85
SCARB2-220ENST00000640076 LOC102724159A0A0B4J2E5 919 aa9.75□□□□□ -0.85
SCARB2-220ENST00000640076 PIK3CDO00329 1044 aa9.75□□□□□ -0.85
SCARB2-220ENST00000640076 SASH1O94885 1247 aa9.75□□□□□ -0.85
SCARB2-220ENST00000640076 COL19A1Q14993 1142 aa9.75□□□□□ -0.85
SCARB2-220ENST00000640076 R3HDM1Q15032 1099 aaKnown RBP9.75□□□□□ -0.85
SCARB2-220ENST00000640076 PWP2Q15269 919 aaKnown RBP9.75□□□□□ -0.85
SCARB2-220ENST00000640076 C9orf131Q5VYM1 1079 aa9.75□□□□□ -0.85
SCARB2-220ENST00000640076 ATG9AQ7Z3C6 839 aa9.75□□□□□ -0.85
SCARB2-220ENST00000640076 PLEKHM2Q8IWE5 1019 aa9.75□□□□□ -0.85
SCARB2-220ENST00000640076 HELBQ8NG08 1087 aaPredicted RBP9.75□□□□□ -0.85
SCARB2-220ENST00000640076 KIF1BPQ96EK5 621 aa9.75□□□□□ -0.85
SCARB2-220ENST00000640076 SEC31BQ9NQW1 1179 aa9.75□□□□□ -0.85
SCARB2-220ENST00000640076 TAF1P21675 1872 aa9.75□□□□□ -0.85
SCARB2-220ENST00000640076 TTLL13PA6NNM8 815 aa9.74□□□□□ -0.85
SCARB2-220ENST00000640076 EYA2O00167 538 aa9.74□□□□□ -0.85
SCARB2-220ENST00000640076 CIAO1O76071 339 aa9.74□□□□□ -0.85
SCARB2-220ENST00000640076 RAD51AP2Q09MP3 1159 aa9.74□□□□□ -0.85
SCARB2-220ENST00000640076 CRY2Q49AN0 593 aa9.74□□□□□ -0.85
SCARB2-220ENST00000640076 LRRC24Q50LG9 513 aa9.74□□□□□ -0.85
SCARB2-220ENST00000640076 PNMA1Q8ND90 353 aa9.74□□□□□ -0.85
SCARB2-220ENST00000640076 C1orf216Q8TAB5 229 aa9.74□□□□□ -0.85
SCARB2-220ENST00000640076 FAM200AQ8TCP9 573 aa9.74□□□□□ -0.85
SCARB2-220ENST00000640076 PUS3Q9BZE2 481 aaKnown RBP9.74□□□□□ -0.85
SCARB2-220ENST00000640076 IL1RAPL2Q9NP60 686 aa9.74□□□□□ -0.85
SCARB2-220ENST00000640076 COL4A1P02462 1669 aa9.74□□□□□ -0.85
SCARB2-220ENST00000640076 IL15P40933 162 aaPredicted RBP9.74□□□□□ -0.85
SCARB2-220ENST00000640076 MRPL58Q14197 206 aaKnown RBP9.74□□□□□ -0.85
SCARB2-220ENST00000640076 BRIP1Q9BX63 1249 aa9.74□□□□□ -0.85
SCARB2-220ENST00000640076 EGFL7Q9UHF1 273 aa9.74□□□□□ -0.85
SCARB2-220ENST00000640076 KLRG2A4D1S0 409 aaPredicted RBP9.73□□□□□ -0.85
SCARB2-220ENST00000640076 RCCD1A6NED2 376 aa9.73□□□□□ -0.85
SCARB2-220ENST00000640076 DDX11L8A8MPP1 907 aa9.73□□□□□ -0.85
SCARB2-220ENST00000640076 TIE1P35590 1138 aa9.73□□□□□ -0.85
SCARB2-220ENST00000640076 RGS3P49796 1198 aa9.73□□□□□ -0.85
SCARB2-220ENST00000640076 PTK7Q13308 1070 aa9.73□□□□□ -0.85
SCARB2-220ENST00000640076 LDHAL6AQ6ZMR3 332 aa9.73□□□□□ -0.85
SCARB2-220ENST00000640076 C16orf71Q8IYS4 520 aaPredicted RBP9.73□□□□□ -0.85
SCARB2-220ENST00000640076 LARGE2Q8N3Y3 721 aa9.73□□□□□ -0.85
SCARB2-220ENST00000640076 CDC5LQ99459 802 aaKnown RBP9.73□□□□□ -0.85
SCARB2-220ENST00000640076 PRDM10Q9NQV6 1147 aa9.73□□□□□ -0.85
SCARB2-220ENST00000640076 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.73□□□□□ -0.85
SCARB2-220ENST00000640076 SPEF2Q9C093 1822 aa9.73□□□□□ -0.85
SCARB2-220ENST00000640076 ZBTB7AO95365 584 aa9.72□□□□□ -0.85
SCARB2-220ENST00000640076 TFCP2Q12800 502 aa9.72□□□□□ -0.85
SCARB2-220ENST00000640076 EGFLAMQ63HQ2 1017 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms