RNA–Protein interactions for RNA: ENST00000639953.1

ATM-229, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5 BASIC

Gene ATM, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-229ENST00000639953 ANKLE2Q86XL3 938 aa8.62□□□□□ -1.03
ATM-229ENST00000639953 ETFBKMTQ8IXQ9 262 aa8.62□□□□□ -1.03
ATM-229ENST00000639953 STK32AQ8WU08 396 aa8.62□□□□□ -1.03
ATM-229ENST00000639953 C11orf16Q9NQ32 467 aa8.62□□□□□ -1.03
ATM-229ENST00000639953 TLR7Q9NYK1 1049 aaKnown RBP8.62□□□□□ -1.03
ATM-229ENST00000639953 FRRS1LQ9P0K9 344 aa8.62□□□□□ -1.03
ATM-229ENST00000639953 ARHGAP23Q9P227 1491 aa8.62□□□□□ -1.03
ATM-229ENST00000639953 IQGAP1P46940 1657 aa8.62□□□□□ -1.03
ATM-229ENST00000639953 TMEM2Q9UHN6 1383 aa8.61□□□□□ -1.03
ATM-229ENST00000639953 KIF1BO60333 1816 aa8.61□□□□□ -1.03
ATM-229ENST00000639953 ACIN1Q9UKV3 1341 aaKnown RBP8.61□□□□□ -1.03
ATM-229ENST00000639953 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.61□□□□□ -1.03
ATM-229ENST00000639953 MMP20O60882 483 aa8.61□□□□□ -1.03
ATM-229ENST00000639953 TXNDC2Q86VQ3 553 aa8.61□□□□□ -1.03
ATM-229ENST00000639953 NPHP4O75161 1426 aaPredicted RBP8.61□□□□□ -1.03
ATM-229ENST00000639953 SCAF11Q99590 1463 aaKnown RBP8.6□□□□□ -1.03
ATM-229ENST00000639953 LOC102724428A0A0B4J2F2 783 aa8.6□□□□□ -1.03
ATM-229ENST00000639953 EGFRP00533 1210 aa8.6□□□□□ -1.03
ATM-229ENST00000639953 NRLP54845 237 aa8.6□□□□□ -1.03
ATM-229ENST00000639953 SIK1P57059 783 aa8.6□□□□□ -1.03
ATM-229ENST00000639953 NRG1Q02297 640 aaPredicted RBP8.6□□□□□ -1.03
ATM-229ENST00000639953 NAA30Q147X3 362 aaPredicted RBP8.6□□□□□ -1.03
ATM-229ENST00000639953 FBXO11Q86XK2 927 aa8.6□□□□□ -1.03
ATM-229ENST00000639953 WFDC8Q8IUA0 241 aa8.6□□□□□ -1.03
ATM-229ENST00000639953 TTC9Q92623 222 aa8.6□□□□□ -1.03
ATM-229ENST00000639953 RIMS2Q9UQ26 1411 aa8.6□□□□□ -1.03
ATM-229ENST00000639953 ZNF335Q9H4Z2 1342 aaPredicted RBP8.59□□□□□ -1.03
ATM-229ENST00000639953 MED14O60244 1454 aa8.59□□□□□ -1.03
ATM-229ENST00000639953 EIF2AK2P19525 551 aaKnown RBP8.59□□□□□ -1.03
ATM-229ENST00000639953 ELOAQ14241 798 aaKnown RBP8.59□□□□□ -1.03
ATM-229ENST00000639953 SWI5Q1ZZU3 235 aa8.59□□□□□ -1.03
ATM-229ENST00000639953 TP53INP1Q96A56 240 aa8.59□□□□□ -1.03
ATM-229ENST00000639953 MKNK1Q9BUB5 465 aa8.59□□□□□ -1.03
ATM-229ENST00000639953 EID1Q9Y6B2 187 aa8.59□□□□□ -1.03
ATM-229ENST00000639953 ZFYVE9O95405 1425 aa8.59□□□□□ -1.03
ATM-229ENST00000639953 STRCP1A6NGW2 1772 aa8.58□□□□□ -1.04
ATM-229ENST00000639953 DEAF1O75398 565 aaPredicted RBP8.58□□□□□ -1.04
ATM-229ENST00000639953 ZNF326Q5BKZ1 582 aaKnown RBP8.58□□□□□ -1.04
ATM-229ENST00000639953 WFDC12Q8WWY7 111 aa8.58□□□□□ -1.04
ATM-229ENST00000639953 NSUN5Q96P11 429 aaKnown RBP8.58□□□□□ -1.04
ATM-229ENST00000639953 SSBP4Q9BWG4 385 aaPredicted RBP8.58□□□□□ -1.04
ATM-229ENST00000639953 PSAPP07602 524 aa8.57□□□□□ -1.04
ATM-229ENST00000639953 BRD2P25440 801 aaKnown RBP8.57□□□□□ -1.04
ATM-229ENST00000639953 IREB2P48200 963 aaKnown RBP8.57□□□□□ -1.04
ATM-229ENST00000639953 GDF6Q6KF10 455 aaPredicted RBP8.57□□□□□ -1.04
ATM-229ENST00000639953 C16orf46Q6P387 395 aa8.57□□□□□ -1.04
ATM-229ENST00000639953 PLD4Q96BZ4 506 aa8.57□□□□□ -1.04
ATM-229ENST00000639953 SLC26A8Q96RN1 970 aa8.57□□□□□ -1.04
ATM-229ENST00000639953 NEXMIFQ5QGS0 1516 aa8.57□□□□□ -1.04
ATM-229ENST00000639953 LTBP4Q8N2S1 1624 aa8.57□□□□□ -1.04
ATM-229ENST00000639953 CCDC144AA2RUR9 1427 aa8.56□□□□□ -1.04
ATM-229ENST00000639953 H2AFB1P0C5Y9 115 aa8.56□□□□□ -1.04
ATM-229ENST00000639953 H2AFB2P0C5Z0 115 aa8.56□□□□□ -1.04
ATM-229ENST00000639953 TRIP4Q15650 581 aaPredicted RBP8.56□□□□□ -1.04
ATM-229ENST00000639953 RGL3Q3MIN7 710 aa8.56□□□□□ -1.04
ATM-229ENST00000639953 TMEM164Q5U3C3 297 aa8.56□□□□□ -1.04
ATM-229ENST00000639953 DTWD1Q8N5C7 304 aa8.56□□□□□ -1.04
ATM-229ENST00000639953 CXXC1Q9P0U4 656 aaPredicted RBP8.56□□□□□ -1.04
ATM-229ENST00000639953 PPLO60437 1756 aa8.56□□□□□ -1.04
ATM-229ENST00000639953 SCO2A0A1W2PP80 73 aa8.55□□□□□ -1.04
ATM-229ENST00000639953 TNFRSF10BO14763 440 aa8.55□□□□□ -1.04
ATM-229ENST00000639953 ARID4AP29374 1257 aaPredicted RBP8.55□□□□□ -1.04
ATM-229ENST00000639953 NOS3P29474 1203 aa8.55□□□□□ -1.04
ATM-229ENST00000639953 NBPF8Q3BBV2 869 aa8.55□□□□□ -1.04
ATM-229ENST00000639953 ANKRD30BQ9BXX2 1392 aa8.55□□□□□ -1.04
ATM-229ENST00000639953 PLEKHG1Q9ULL1 1385 aa8.55□□□□□ -1.04
ATM-229ENST00000639953 NRXN3Q9Y4C0 1643 aa8.54□□□□□ -1.04
ATM-229ENST00000639953 IFT172Q9UG01 1749 aa8.54□□□□□ -1.04
ATM-229ENST00000639953 ZBTB39O15060 712 aa8.54□□□□□ -1.04
ATM-229ENST00000639953 ATG7O95352 703 aa8.54□□□□□ -1.04
ATM-229ENST00000639953 IGF2-ASQ6U949 168 aa8.54□□□□□ -1.04
ATM-229ENST00000639953 NLRP13Q86W25 1043 aa8.54□□□□□ -1.04
ATM-229ENST00000639953 IL22RA1Q8N6P7 574 aa8.54□□□□□ -1.04
ATM-229ENST00000639953 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.54□□□□□ -1.04
ATM-229ENST00000639953 SLAIN2Q9P270 581 aa8.54□□□□□ -1.04
ATM-229ENST00000639953 SPATA31E1Q6ZUB1 1445 aa8.54□□□□□ -1.04
ATM-229ENST00000639953 ALX3O95076 343 aa8.53□□□□□ -1.04
ATM-229ENST00000639953 GHRHP01286 108 aa8.53□□□□□ -1.04
ATM-229ENST00000639953 COL13A1Q5TAT6 717 aaPredicted RBP8.53□□□□□ -1.04
ATM-229ENST00000639953 MEGF10Q96KG7 1140 aa8.53□□□□□ -1.04
ATM-229ENST00000639953 UBAP1LF5GYI3 381 aa8.52□□□□□ -1.05
ATM-229ENST00000639953 DLL1O00548 723 aa8.52□□□□□ -1.05
ATM-229ENST00000639953 COL26A1Q96A83 441 aa8.52□□□□□ -1.05
ATM-229ENST00000639953 ZMYND15Q9H091 742 aa8.52□□□□□ -1.05
ATM-229ENST00000639953 TRIM33Q9UPN9 1127 aa8.52□□□□□ -1.05
ATM-229ENST00000639953 ADAMTS13Q76LX8 1427 aa8.52□□□□□ -1.05
ATM-229ENST00000639953 CHD2O14647 1828 aaKnown RBP8.52□□□□□ -1.05
ATM-229ENST00000639953 XIRP1Q702N8 1843 aaKnown RBP8.52□□□□□ -1.05
ATM-229ENST00000639953 GPR152Q8TDT2 470 aa8.51□□□□□ -1.05
ATM-229ENST00000639953 SETBP1Q9Y6X0 1596 aa8.51□□□□□ -1.05
ATM-229ENST00000639953 ADGRF5Q8IZF2 1346 aa8.51□□□□□ -1.05
ATM-229ENST00000639953 SETD1AO15047 1707 aaKnown RBP8.5□□□□□ -1.05
ATM-229ENST00000639953 SOX18P35713 384 aa8.5□□□□□ -1.05
ATM-229ENST00000639953 ZAP70P43403 619 aa8.5□□□□□ -1.05
ATM-229ENST00000639953 DDX10Q13206 875 aaKnown RBP8.5□□□□□ -1.05
ATM-229ENST00000639953 PIK3R5Q8WYR1 880 aa8.5□□□□□ -1.05
ATM-229ENST00000639953 PTPRUQ92729 1446 aa8.5□□□□□ -1.05
ATM-229ENST00000639953 YTHDC1Q96MU7 727 aaKnown RBP8.5□□□□□ -1.05
ATM-229ENST00000639953 RPGRIP1LQ68CZ1 1315 aa8.5□□□□□ -1.05
ATM-229ENST00000639953 CPS1P31327 1500 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms