RNA–Protein interactions for RNA: ENST00000639856.1

TRIM3-215, Transcript of tripartite motif containing 3, humanhuman

TSL 5 BASIC

Gene TRIM3, Length 2,137 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-215ENST00000639856 TCRBV5S4A2TA0A5A2 114 aa17.82■□□□□ 0.44
TRIM3-215ENST00000639856 ZSCAN25Q6NSZ9 544 aa17.82■□□□□ 0.44
TRIM3-215ENST00000639856 TNS1Q9HBL0 1735 aaKnown RBP17.82■□□□□ 0.44
TRIM3-215ENST00000639856 UBE3CQ15386 1083 aa17.81■□□□□ 0.44
TRIM3-215ENST00000639856 POTEAQ6S8J7 498 aa17.81■□□□□ 0.44
TRIM3-215ENST00000639856 BRF1Q92994 677 aa17.81■□□□□ 0.44
TRIM3-215ENST00000639856 E7EWF7 191 aa17.81■□□□□ 0.44
TRIM3-215ENST00000639856 CCDC183Q5T5S1 534 aa17.81■□□□□ 0.44
TRIM3-215ENST00000639856 MAGEB6Q8N7X4 407 aa17.81■□□□□ 0.44
TRIM3-215ENST00000639856 AKT1S1Q96B36 256 aa17.81■□□□□ 0.44
TRIM3-215ENST00000639856 AGXT2Q9BYV1 514 aa17.81■□□□□ 0.44
TRIM3-215ENST00000639856 TSPY26PQ9H489 355 aa17.81■□□□□ 0.44
TRIM3-215ENST00000639856 FGD1P98174 961 aa17.8■□□□□ 0.44
TRIM3-215ENST00000639856 EXOSC10Q01780 885 aaKnown RBP17.8■□□□□ 0.44
TRIM3-215ENST00000639856 FAM84BQ96KN1 310 aaPredicted RBP17.8■□□□□ 0.44
TRIM3-215ENST00000639856 ESPNB1AK53 854 aa17.8■□□□□ 0.44
TRIM3-215ENST00000639856 POLRMTO00411 1230 aaKnown RBP17.8■□□□□ 0.44
TRIM3-215ENST00000639856 LRRC2Q9BYS8 371 aa17.8■□□□□ 0.44
TRIM3-215ENST00000639856 FGAP02671 866 aa17.79■□□□□ 0.44
TRIM3-215ENST00000639856 HAND2P61296 217 aa17.79■□□□□ 0.44
TRIM3-215ENST00000639856 KRT85P78386 507 aa17.79■□□□□ 0.44
TRIM3-215ENST00000639856 MAP3K12Q12852 859 aa17.79■□□□□ 0.44
TRIM3-215ENST00000639856 GRAPQ13588 217 aa17.79■□□□□ 0.44
TRIM3-215ENST00000639856 COL23A1Q86Y22 540 aaPredicted RBP17.79■□□□□ 0.44
TRIM3-215ENST00000639856 GRAPLQ8TC17 118 aaPredicted RBP17.79■□□□□ 0.44
TRIM3-215ENST00000639856 JAK2O60674 1132 aa17.78■□□□□ 0.44
TRIM3-215ENST00000639856 PFKFB2O60825 505 aa17.78■□□□□ 0.44
TRIM3-215ENST00000639856 LETM1O95202 739 aaPredicted RBP17.78■□□□□ 0.44
TRIM3-215ENST00000639856 ST5P78524 1137 aa17.78■□□□□ 0.44
TRIM3-215ENST00000639856 SCRN1Q12765 414 aa17.78■□□□□ 0.44
TRIM3-215ENST00000639856 CAVIN4Q5BKX8 364 aa17.78■□□□□ 0.44
TRIM3-215ENST00000639856 FERMT3Q86UX7 667 aa17.78■□□□□ 0.44
TRIM3-215ENST00000639856 VPS37DQ86XT2 251 aa17.78■□□□□ 0.44
TRIM3-215ENST00000639856 LLPHQ9BRT6 129 aaKnown RBP17.78■□□□□ 0.44
TRIM3-215ENST00000639856 CTNNA3Q9UI47 895 aa17.78■□□□□ 0.44
TRIM3-215ENST00000639856 CLCN1P35523 988 aa17.78■□□□□ 0.44
TRIM3-215ENST00000639856 PDLIM2Q96JY6 352 aa17.78■□□□□ 0.44
TRIM3-215ENST00000639856 ANKRD2Q9GZV1 360 aa17.78■□□□□ 0.44
TRIM3-215ENST00000639856 MYH13Q9UKX3 1938 aa17.78■□□□□ 0.44
TRIM3-215ENST00000639856 CRY2Q49AN0 593 aa17.77■□□□□ 0.44
TRIM3-215ENST00000639856 TXNRD3Q86VQ6 643 aa17.77■□□□□ 0.44
TRIM3-215ENST00000639856 RPGRQ92834 1020 aaKnown RBP17.77■□□□□ 0.44
TRIM3-215ENST00000639856 GNL3LQ9NVN8 582 aaKnown RBP17.77■□□□□ 0.44
TRIM3-215ENST00000639856 FBXO33Q7Z6M2 555 aa17.77■□□□□ 0.43
TRIM3-215ENST00000639856 SMARCC2Q8TAQ2 1214 aa17.77■□□□□ 0.43
TRIM3-215ENST00000639856 LRP2BPQ9P2M1 347 aa17.77■□□□□ 0.43
TRIM3-215ENST00000639856 ELP1O95163 1332 aa17.77■□□□□ 0.43
TRIM3-215ENST00000639856 TTC6Q86TZ1 520 aa17.76■□□□□ 0.43
TRIM3-215ENST00000639856 KLHL34Q8N239 644 aa17.76■□□□□ 0.43
TRIM3-215ENST00000639856 AIDAQ96BJ3 306 aa17.76■□□□□ 0.43
TRIM3-215ENST00000639856 STRBPQ96SI9 672 aaKnown RBP17.76■□□□□ 0.43
TRIM3-215ENST00000639856 ABCF2Q9UG63 623 aa17.76■□□□□ 0.43
TRIM3-215ENST00000639856 MBD4O95243 580 aa17.75■□□□□ 0.43
TRIM3-215ENST00000639856 APOBRQ0VD83 1088 aa17.75■□□□□ 0.43
TRIM3-215ENST00000639856 IMMTQ16891 758 aaKnown RBP17.75■□□□□ 0.43
TRIM3-215ENST00000639856 FAM173BQ6P4H8 233 aa17.75■□□□□ 0.43
TRIM3-215ENST00000639856 FBXL16Q8N461 479 aa17.75■□□□□ 0.43
TRIM3-215ENST00000639856 RNF214Q8ND24 703 aa17.75■□□□□ 0.43
TRIM3-215ENST00000639856 ANKRD31Q8N7Z5 1873 aa17.75■□□□□ 0.43
TRIM3-215ENST00000639856 TPRNQ4KMQ1 711 aa17.75■□□□□ 0.43
TRIM3-215ENST00000639856 SCAND2PQ9GZW5 306 aaPredicted RBP17.75■□□□□ 0.43
TRIM3-215ENST00000639856 ARMT1Q9H993 441 aa17.75■□□□□ 0.43
TRIM3-215ENST00000639856 ANKIB1Q9P2G1 1089 aa17.75■□□□□ 0.43
TRIM3-215ENST00000639856 IRS2Q9Y4H2 1338 aa17.75■□□□□ 0.43
TRIM3-215ENST00000639856 APPP05067 770 aa17.74■□□□□ 0.43
TRIM3-215ENST00000639856 CHST3Q7LGC8 479 aa17.74■□□□□ 0.43
TRIM3-215ENST00000639856 ADGRA1Q86SQ6 560 aa17.74■□□□□ 0.43
TRIM3-215ENST00000639856 FAM184AQ8NB25 1140 aa17.74■□□□□ 0.43
TRIM3-215ENST00000639856 NSUN7Q8NE18 718 aaKnown RBP17.74■□□□□ 0.43
TRIM3-215ENST00000639856 ZNF274Q96GC6 653 aaPredicted RBP17.74■□□□□ 0.43
TRIM3-215ENST00000639856 NBPF3Q9H094 633 aa17.74■□□□□ 0.43
TRIM3-215ENST00000639856 CACNA1SQ13698 1873 aa17.74■□□□□ 0.43
TRIM3-215ENST00000639856 HIBADHP31937 336 aaKnown RBP17.74■□□□□ 0.43
TRIM3-215ENST00000639856 HMGN5P82970 282 aaKnown RBP17.74■□□□□ 0.43
TRIM3-215ENST00000639856 MIGA1Q8NAN2 632 aa17.74■□□□□ 0.43
TRIM3-215ENST00000639856 PNPLA7Q6ZV29 1317 aa17.73■□□□□ 0.43
TRIM3-215ENST00000639856 LCORLQ8N3X6 602 aa17.73■□□□□ 0.43
TRIM3-215ENST00000639856 DDX11Q96FC9 970 aa17.73■□□□□ 0.43
TRIM3-215ENST00000639856 GPR101Q96P66 508 aaPredicted RBP17.73■□□□□ 0.43
TRIM3-215ENST00000639856 EPB41L4AQ9HCS5 686 aaPredicted RBP17.73■□□□□ 0.43
TRIM3-215ENST00000639856 RAI14Q9P0K7 980 aa17.73■□□□□ 0.43
TRIM3-215ENST00000639856 DENND2AQ9ULE3 1009 aa17.73■□□□□ 0.43
TRIM3-215ENST00000639856 H3BQV1 296 aa17.72■□□□□ 0.43
TRIM3-215ENST00000639856 CTDNEP1O95476 244 aa17.72■□□□□ 0.43
TRIM3-215ENST00000639856 HMGB2P26583 209 aaKnown RBP17.72■□□□□ 0.43
TRIM3-215ENST00000639856 EVCP57679 992 aa17.72■□□□□ 0.43
TRIM3-215ENST00000639856 RESTQ13127 1097 aa17.72■□□□□ 0.43
TRIM3-215ENST00000639856 HS1BP3Q53T59 392 aa17.72■□□□□ 0.43
TRIM3-215ENST00000639856 IFFO2Q5TF58 517 aa17.72■□□□□ 0.43
TRIM3-215ENST00000639856 CHMP4CQ96CF2 233 aa17.72■□□□□ 0.43
TRIM3-215ENST00000639856 ZSCAN16Q9H4T2 348 aaPredicted RBP17.72■□□□□ 0.43
TRIM3-215ENST00000639856 JAG2Q9Y219 1238 aa17.72■□□□□ 0.43
TRIM3-215ENST00000639856 RGPD3A6NKT7 1758 aaPredicted RBP17.72■□□□□ 0.43
TRIM3-215ENST00000639856 RGPD4Q7Z3J3 1758 aa17.72■□□□□ 0.43
TRIM3-215ENST00000639856 PRKAB2O43741 272 aa17.72■□□□□ 0.43
TRIM3-215ENST00000639856 CYP7A1P22680 504 aa17.72■□□□□ 0.43
TRIM3-215ENST00000639856 PDIA3P30101 505 aaKnown RBP17.72■□□□□ 0.43
TRIM3-215ENST00000639856 MSL1Q68DK7 614 aa17.72■□□□□ 0.43
TRIM3-215ENST00000639856 RBM17Q96I25 401 aaKnown RBP17.72■□□□□ 0.43
TRIM3-215ENST00000639856 KIF3AQ9Y496 699 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms