RNA–Protein interactions for RNA: ENST00000638952.1

HNRNPU-217, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 5,678 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-217ENST00000638952 RPS6KB1P23443 525 aa19.43■□□□□ 0.7
HNRNPU-217ENST00000638952 KCNK9Q9NPC2 374 aa19.43■□□□□ 0.7
HNRNPU-217ENST00000638952 CCDC172P0C7W6 258 aa19.43■□□□□ 0.7
HNRNPU-217ENST00000638952 ZNF569Q5MCW4 686 aa19.43■□□□□ 0.7
HNRNPU-217ENST00000638952 B4GALNT4Q76KP1 1039 aa19.43■□□□□ 0.7
HNRNPU-217ENST00000638952 BRAPQ7Z569 592 aa19.43■□□□□ 0.7
HNRNPU-217ENST00000638952 CACNA2D3Q8IZS8 1091 aa19.43■□□□□ 0.7
HNRNPU-217ENST00000638952 SNX14Q9Y5W7 946 aa19.43■□□□□ 0.7
HNRNPU-217ENST00000638952 BLMP54132 1417 aaPredicted RBP19.43■□□□□ 0.7
HNRNPU-217ENST00000638952 KRT2P35908 639 aa19.43■□□□□ 0.7
HNRNPU-217ENST00000638952 STXBP4Q6ZWJ1 553 aa19.43■□□□□ 0.7
HNRNPU-217ENST00000638952 PPM1FP49593 454 aaPredicted RBP19.43■□□□□ 0.7
HNRNPU-217ENST00000638952 UBXN1Q04323 297 aa19.43■□□□□ 0.7
HNRNPU-217ENST00000638952 TTC16Q8NEE8 873 aa19.43■□□□□ 0.7
HNRNPU-217ENST00000638952 UTP14AQ9BVJ6 771 aaKnown RBP19.43■□□□□ 0.7
HNRNPU-217ENST00000638952 GUCA1BQ9UMX6 200 aa19.42■□□□□ 0.7
HNRNPU-217ENST00000638952 TLDC2A0PJX2 215 aa19.42■□□□□ 0.7
HNRNPU-217ENST00000638952 CIB2O75838 187 aa19.42■□□□□ 0.7
HNRNPU-217ENST00000638952 ARL1P40616 181 aaPredicted RBP19.42■□□□□ 0.7
HNRNPU-217ENST00000638952 EYA1Q99502 592 aa19.42■□□□□ 0.7
HNRNPU-217ENST00000638952 DNMT1P26358 1616 aaKnown RBP19.42■□□□□ 0.7
HNRNPU-217ENST00000638952 KIAA0556O60303 1618 aa19.42■□□□□ 0.7
HNRNPU-217ENST00000638952 UHRF1BP1Q6BDS2 1440 aa19.42■□□□□ 0.7
HNRNPU-217ENST00000638952 SPAG5Q96R06 1193 aa19.42■□□□□ 0.7
HNRNPU-217ENST00000638952 INTS8Q75QN2 995 aaKnown RBP19.42■□□□□ 0.7
HNRNPU-217ENST00000638952 TBC1D5Q92609 795 aa19.42■□□□□ 0.7
HNRNPU-217ENST00000638952 ZCRB1Q8TBF4 217 aaKnown RBP19.42■□□□□ 0.7
HNRNPU-217ENST00000638952 ZNF219Q9P2Y4 722 aaPredicted RBP19.42■□□□□ 0.7
HNRNPU-217ENST00000638952 SHANK2Q9UPX8 1470 aa19.41■□□□□ 0.7
HNRNPU-217ENST00000638952 SLC27A2O14975 620 aa19.41■□□□□ 0.7
HNRNPU-217ENST00000638952 INPP5BP32019 993 aa19.41■□□□□ 0.7
HNRNPU-217ENST00000638952 GSTO1P78417 241 aa19.41■□□□□ 0.7
HNRNPU-217ENST00000638952 CCDC110Q8TBZ0 833 aa19.41■□□□□ 0.7
HNRNPU-217ENST00000638952 AFAP1L1Q8TED9 768 aa19.41■□□□□ 0.7
HNRNPU-217ENST00000638952 KRT83P78385 493 aa19.41■□□□□ 0.7
HNRNPU-217ENST00000638952 POTEDQ86YR6 584 aa19.41■□□□□ 0.7
HNRNPU-217ENST00000638952 IFT74Q96LB3 600 aa19.41■□□□□ 0.7
HNRNPU-217ENST00000638952 RTL9Q8NET4 1388 aa19.41■□□□□ 0.7
HNRNPU-217ENST00000638952 RNF123Q5XPI4 1314 aa19.41■□□□□ 0.7
HNRNPU-217ENST00000638952 ATP2A1O14983 1001 aa19.41■□□□□ 0.7
HNRNPU-217ENST00000638952 VAV2P52735 878 aa19.41■□□□□ 0.7
HNRNPU-217ENST00000638952 C17orf53Q8N3J3 647 aaPredicted RBP19.41■□□□□ 0.7
HNRNPU-217ENST00000638952 TRIM35Q9UPQ4 493 aa19.41■□□□□ 0.7
HNRNPU-217ENST00000638952 TRIM7Q9C029 511 aa19.41■□□□□ 0.7
HNRNPU-217ENST00000638952 MAGEB6P1A0A0J9YX57 407 aa19.4■□□□□ 0.7
HNRNPU-217ENST00000638952 KRT86O43790 486 aa19.4■□□□□ 0.7
HNRNPU-217ENST00000638952 SF3B2Q13435 895 aaKnown RBP19.4■□□□□ 0.7
HNRNPU-217ENST00000638952 SSX2IPQ9Y2D8 614 aa19.4■□□□□ 0.7
HNRNPU-217ENST00000638952 PRPHP41219 470 aa19.4■□□□□ 0.7
HNRNPU-217ENST00000638952 NAA16Q6N069 864 aaPredicted RBP19.4■□□□□ 0.7
HNRNPU-217ENST00000638952 NAPAP54920 295 aa19.4■□□□□ 0.7
HNRNPU-217ENST00000638952 MAGEB6Q8N7X4 407 aa19.4■□□□□ 0.7
HNRNPU-217ENST00000638952 NFATC2IPQ8NCF5 419 aa19.4■□□□□ 0.7
HNRNPU-217ENST00000638952 GADD45BO75293 160 aaPredicted RBP19.4■□□□□ 0.7
HNRNPU-217ENST00000638952 MCM7P33993 719 aa19.4■□□□□ 0.7
HNRNPU-217ENST00000638952 GSTA5Q7RTV2 222 aa19.4■□□□□ 0.7
HNRNPU-217ENST00000638952 SDAD1Q9NVU7 687 aaKnown RBP eCLIP19.4■□□□□ 0.71e-6■□□□□ 10.5
HNRNPU-217ENST00000638952 TERF1P54274 439 aa19.4■□□□□ 0.7
HNRNPU-217ENST00000638952 KIF5AQ12840 1032 aa19.4■□□□□ 0.7
HNRNPU-217ENST00000638952 SAMM50Q9Y512 469 aa19.4■□□□□ 0.7
HNRNPU-217ENST00000638952 HLA-DOAP06340 250 aa19.39■□□□□ 0.7
HNRNPU-217ENST00000638952 MIGA1Q8NAN2 632 aa19.39■□□□□ 0.7
HNRNPU-217ENST00000638952 RGS22Q8NE09 1264 aa19.39■□□□□ 0.7
HNRNPU-217ENST00000638952 MKRN1Q9UHC7 482 aaKnown RBP19.39■□□□□ 0.7
HNRNPU-217ENST00000638952 CASQ2O14958 399 aaPredicted RBP19.39■□□□□ 0.69
HNRNPU-217ENST00000638952 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.39■□□□□ 0.69
HNRNPU-217ENST00000638952 TEX14Q8IWB6 1497 aa19.39■□□□□ 0.69
HNRNPU-217ENST00000638952 ZNF445P59923 1031 aa19.39■□□□□ 0.69
HNRNPU-217ENST00000638952 CEP85LQ5SZL2 805 aa19.39■□□□□ 0.69
HNRNPU-217ENST00000638952 SEPT14Q6ZU15 432 aa19.39■□□□□ 0.69
HNRNPU-217ENST00000638952 GBP7Q8N8V2 638 aaPredicted RBP19.39■□□□□ 0.69
HNRNPU-217ENST00000638952 NCKAP5LQ9HCH0 1330 aa19.39■□□□□ 0.69
HNRNPU-217ENST00000638952 ARID5AQ03989 594 aa19.39■□□□□ 0.69
HNRNPU-217ENST00000638952 RBM28Q9NW13 759 aaKnown RBP19.39■□□□□ 0.69
HNRNPU-217ENST00000638952 ELP1O95163 1332 aa19.39■□□□□ 0.69
HNRNPU-217ENST00000638952 NDC80O14777 642 aa19.38■□□□□ 0.69
HNRNPU-217ENST00000638952 GBP1P32455 592 aa19.38■□□□□ 0.69
HNRNPU-217ENST00000638952 PAXIP1Q6ZW49 1069 aaPredicted RBP19.38■□□□□ 0.69
HNRNPU-217ENST00000638952 ERMNQ8TAM6 284 aa19.38■□□□□ 0.69
HNRNPU-217ENST00000638952 TUBBP07437 444 aa19.38■□□□□ 0.69
HNRNPU-217ENST00000638952 NEDD9Q14511 834 aa19.38■□□□□ 0.69
HNRNPU-217ENST00000638952 VCX3BQ9H321 246 aa19.38■□□□□ 0.69
HNRNPU-217ENST00000638952 CLSTN2Q9H4D0 955 aa19.38■□□□□ 0.69
HNRNPU-217ENST00000638952 UHRF1BP1LA0JNW5 1464 aa19.38■□□□□ 0.69
HNRNPU-217ENST00000638952 CHMP4BP1P59074 171 aa19.38■□□□□ 0.69
HNRNPU-217ENST00000638952 HELLSQ9NRZ9 838 aa19.38■□□□□ 0.69
HNRNPU-217ENST00000638952 BAG1Q99933 345 aaPredicted RBP19.38■□□□□ 0.69
HNRNPU-217ENST00000638952 VIMP08670 466 aaKnown RBP19.38■□□□□ 0.69
HNRNPU-217ENST00000638952 MYL5Q02045 173 aa19.38■□□□□ 0.69
HNRNPU-217ENST00000638952 LMBR1Q8WVP7 490 aa19.38■□□□□ 0.69
HNRNPU-217ENST00000638952 LMBRD1Q9NUN5 540 aa19.38■□□□□ 0.69
HNRNPU-217ENST00000638952 NDUFAB1O14561 156 aa19.37■□□□□ 0.69
HNRNPU-217ENST00000638952 ZNF853P0CG23 659 aa19.37■□□□□ 0.69
HNRNPU-217ENST00000638952 PPP2R3AQ06190 1150 aa19.37■□□□□ 0.69
HNRNPU-217ENST00000638952 RIOK3O14730 519 aaKnown RBP19.37■□□□□ 0.69
HNRNPU-217ENST00000638952 CCDC50Q8IVM0 306 aa19.37■□□□□ 0.69
HNRNPU-217ENST00000638952 FAM173BQ6P4H8 233 aa19.37■□□□□ 0.69
HNRNPU-217ENST00000638952 CCDC42Q96M95 316 aa19.37■□□□□ 0.69
HNRNPU-217ENST00000638952 ATL3Q6DD88 541 aa19.37■□□□□ 0.69
HNRNPU-217ENST00000638952 CALM1P0DP23 149 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms