RNA–Protein interactions for RNA: ENST00000638843.1

SCARB2-214, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 1,579 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-214ENST00000638843 POTEGQ6S5H5 508 aa11.79□□□□□ -0.52
SCARB2-214ENST00000638843 MTMR14Q8NCE2 650 aa11.79□□□□□ -0.52
SCARB2-214ENST00000638843 PRMT6Q96LA8 375 aaPredicted RBP11.79□□□□□ -0.52
SCARB2-214ENST00000638843 ZBTB40Q9NUA8 1239 aa11.79□□□□□ -0.52
SCARB2-214ENST00000638843 TTF2Q9UNY4 1162 aaKnown RBP11.79□□□□□ -0.52
SCARB2-214ENST00000638843 AOX1Q06278 1338 aa11.79□□□□□ -0.52
SCARB2-214ENST00000638843 CNTNAP1P78357 1384 aa11.79□□□□□ -0.52
SCARB2-214ENST00000638843 A0A1B0GUL7 405 aa11.79□□□□□ -0.52
SCARB2-214ENST00000638843 SURF6O75683 361 aaKnown RBP11.79□□□□□ -0.52
SCARB2-214ENST00000638843 VEGFBP49765 207 aa11.79□□□□□ -0.52
SCARB2-214ENST00000638843 PDE3AQ14432 1141 aa11.79□□□□□ -0.52
SCARB2-214ENST00000638843 DEFB115Q30KQ5 88 aa11.79□□□□□ -0.52
SCARB2-214ENST00000638843 PRAMEF18Q5VWM3 479 aa11.79□□□□□ -0.52
SCARB2-214ENST00000638843 CCDC102BQ68D86 513 aa11.79□□□□□ -0.52
SCARB2-214ENST00000638843 SAPCD2Q86UD0 394 aa11.79□□□□□ -0.52
SCARB2-214ENST00000638843 XAGE2Q96GT9 111 aa11.79□□□□□ -0.52
SCARB2-214ENST00000638843 DDX19BQ9UMR2 479 aa11.79□□□□□ -0.52
SCARB2-214ENST00000638843 AKAP2Q9Y2D5 859 aa11.79□□□□□ -0.52
SCARB2-214ENST00000638843 TLL2Q9Y6L7 1015 aa11.79□□□□□ -0.52
SCARB2-214ENST00000638843 PITPNM2Q9BZ72 1349 aa11.79□□□□□ -0.52
SCARB2-214ENST00000638843 TBC1D22AQ8WUA7 517 aa11.78□□□□□ -0.52
SCARB2-214ENST00000638843 CDCA5Q96FF9 252 aa11.78□□□□□ -0.52
SCARB2-214ENST00000638843 NEUROD6Q96NK8 337 aa11.78□□□□□ -0.52
SCARB2-214ENST00000638843 SERPINA10Q9UK55 444 aa11.78□□□□□ -0.52
SCARB2-214ENST00000638843 NOP58Q9Y2X3 529 aaKnown RBP11.78□□□□□ -0.52
SCARB2-214ENST00000638843 RBM5P52756 815 aaKnown RBP eCLIP11.77□□□□□ -0.53
SCARB2-214ENST00000638843 SIRT2Q8IXJ6 389 aa11.77□□□□□ -0.53
SCARB2-214ENST00000638843 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.77□□□□□ -0.53
SCARB2-214ENST00000638843 GNL3LQ9NVN8 582 aaKnown RBP11.77□□□□□ -0.53
SCARB2-214ENST00000638843 COL1A1P02452 1464 aaPredicted RBP11.77□□□□□ -0.53
SCARB2-214ENST00000638843 A0A1B0GUL6 1792 aa11.77□□□□□ -0.53
SCARB2-214ENST00000638843 CLRN2A0PK11 232 aa11.76□□□□□ -0.53
SCARB2-214ENST00000638843 OS9Q13438 667 aaPredicted RBP11.76□□□□□ -0.53
SCARB2-214ENST00000638843 RASGRF1Q13972 1273 aa11.76□□□□□ -0.53
SCARB2-214ENST00000638843 WDR66Q8TBY9 1149 aa11.76□□□□□ -0.53
SCARB2-214ENST00000638843 GBA2Q9HCG7 927 aaPredicted RBP11.76□□□□□ -0.53
SCARB2-214ENST00000638843 CRKP46108 304 aa11.75□□□□□ -0.53
SCARB2-214ENST00000638843 CYP4F22Q6NT55 531 aa11.75□□□□□ -0.53
SCARB2-214ENST00000638843 DEFB129Q9H1M3 183 aa11.75□□□□□ -0.53
SCARB2-214ENST00000638843 DENND2AQ9ULE3 1009 aa11.75□□□□□ -0.53
SCARB2-214ENST00000638843 EXOC6BQ9Y2D4 811 aa11.75□□□□□ -0.53
SCARB2-214ENST00000638843 SUGT1Q9Y2Z0 365 aa11.75□□□□□ -0.53
SCARB2-214ENST00000638843 ZNF646O15015 1829 aaPredicted RBP11.75□□□□□ -0.53
SCARB2-214ENST00000638843 PSME4Q14997 1843 aa11.75□□□□□ -0.53
SCARB2-214ENST00000638843 SEMA3EO15041 775 aa11.75□□□□□ -0.53
SCARB2-214ENST00000638843 PRDX5P30044 214 aa11.75□□□□□ -0.53
SCARB2-214ENST00000638843 HUNKP57058 714 aa11.75□□□□□ -0.53
SCARB2-214ENST00000638843 HDLBPQ00341 1268 aaKnown RBP11.75□□□□□ -0.53
SCARB2-214ENST00000638843 GRM1Q13255 1194 aa11.75□□□□□ -0.53
SCARB2-214ENST00000638843 TNNI3KQ59H18 835 aa11.75□□□□□ -0.53
SCARB2-214ENST00000638843 PAXIP1Q6ZW49 1069 aaPredicted RBP11.75□□□□□ -0.53
SCARB2-214ENST00000638843 APOBEC3FQ8IUX4 373 aaKnown RBP11.75□□□□□ -0.53
SCARB2-214ENST00000638843 RPAP2Q8IXW5 612 aaPredicted RBP11.75□□□□□ -0.53
SCARB2-214ENST00000638843 C2orf69Q8N8R5 385 aa11.75□□□□□ -0.53
SCARB2-214ENST00000638843 MS4A3Q96HJ5 214 aa11.75□□□□□ -0.53
SCARB2-214ENST00000638843 CAPNS2Q96L46 248 aa11.75□□□□□ -0.53
SCARB2-214ENST00000638843 MRIQ9BWK5 157 aa11.75□□□□□ -0.53
SCARB2-214ENST00000638843 TDRD3Q9H7E2 651 aaKnown RBP11.75□□□□□ -0.53
SCARB2-214ENST00000638843 VEZTQ9HBM0 779 aa11.75□□□□□ -0.53
SCARB2-214ENST00000638843 GPR108Q9NPR9 543 aa11.75□□□□□ -0.53
SCARB2-214ENST00000638843 METRNQ9UJH8 293 aa11.75□□□□□ -0.53
SCARB2-214ENST00000638843 FPGT-TNNI3KV9GXZ4 949 aa11.75□□□□□ -0.53
SCARB2-214ENST00000638843 WDR33Q9C0J8 1336 aaKnown RBP11.74□□□□□ -0.53
SCARB2-214ENST00000638843 MYO1BO43795 1136 aa11.74□□□□□ -0.53
SCARB2-214ENST00000638843 DIXDC1Q155Q3 683 aa11.74□□□□□ -0.53
SCARB2-214ENST00000638843 GORABQ5T7V8 394 aa11.74□□□□□ -0.53
SCARB2-214ENST00000638843 ASTLQ6HA08 431 aaPredicted RBP11.74□□□□□ -0.53
SCARB2-214ENST00000638843 APOBEC3HQ6NTF7 200 aaKnown RBP11.74□□□□□ -0.53
SCARB2-214ENST00000638843 PI16Q6UXB8 463 aa11.74□□□□□ -0.53
SCARB2-214ENST00000638843 MOB2Q70IA6 237 aa11.74□□□□□ -0.53
SCARB2-214ENST00000638843 TEKT1Q969V4 418 aa11.74□□□□□ -0.53
SCARB2-214ENST00000638843 HHIPL1Q96JK4 782 aa11.74□□□□□ -0.53
SCARB2-214ENST00000638843 ZNF70Q9UC06 446 aaPredicted RBP11.74□□□□□ -0.53
SCARB2-214ENST00000638843 SALL1Q9NSC2 1324 aa11.73□□□□□ -0.53
SCARB2-214ENST00000638843 RRP1P56182 461 aaKnown RBP11.73□□□□□ -0.53
SCARB2-214ENST00000638843 EAF2Q96CJ1 260 aaPredicted RBP11.73□□□□□ -0.53
SCARB2-214ENST00000638843 ZDHHC15Q96MV8 337 aa11.73□□□□□ -0.53
SCARB2-214ENST00000638843 DBNDD2Q9BQY9 259 aa11.73□□□□□ -0.53
SCARB2-214ENST00000638843 CHMP4BQ9H444 224 aaKnown RBP11.73□□□□□ -0.53
SCARB2-214ENST00000638843 HMG20BQ9P0W2 317 aa11.73□□□□□ -0.53
SCARB2-214ENST00000638843 LDHBP07195 334 aaKnown RBP11.72□□□□□ -0.53
SCARB2-214ENST00000638843 ARID4AP29374 1257 aaPredicted RBP11.72□□□□□ -0.53
SCARB2-214ENST00000638843 RASA3Q14644 834 aa11.72□□□□□ -0.53
SCARB2-214ENST00000638843 HHIPL2Q6UWX4 724 aa11.72□□□□□ -0.53
SCARB2-214ENST00000638843 SPATA5Q8NB90 893 aa11.72□□□□□ -0.53
SCARB2-214ENST00000638843 CCDC8Q9H0W5 538 aaPredicted RBP11.72□□□□□ -0.53
SCARB2-214ENST00000638843 TLR7Q9NYK1 1049 aaKnown RBP11.72□□□□□ -0.53
SCARB2-214ENST00000638843 DBNLQ9UJU6 430 aaKnown RBP11.72□□□□□ -0.53
SCARB2-214ENST00000638843 PDS5AQ29RF7 1337 aaKnown RBP11.72□□□□□ -0.53
SCARB2-214ENST00000638843 UBE2Q2LH0YL09 131 aa11.71□□□□□ -0.53
SCARB2-214ENST00000638843 ATMINO43313 823 aaPredicted RBP11.71□□□□□ -0.53
SCARB2-214ENST00000638843 AOC2O75106 756 aa11.71□□□□□ -0.53
SCARB2-214ENST00000638843 HMMRO75330 724 aa11.71□□□□□ -0.53
SCARB2-214ENST00000638843 ECE1P42892 770 aa11.71□□□□□ -0.53
SCARB2-214ENST00000638843 MCAMP43121 646 aa11.71□□□□□ -0.53
SCARB2-214ENST00000638843 CACNB3P54284 484 aa11.71□□□□□ -0.53
SCARB2-214ENST00000638843 FKBP1BP68106 108 aa11.71□□□□□ -0.53
SCARB2-214ENST00000638843 PRKG1Q13976 671 aa11.71□□□□□ -0.53
SCARB2-214ENST00000638843 RGMBQ6NW40 437 aa11.71□□□□□ -0.53
SCARB2-214ENST00000638843 TBC1D9Q6ZT07 1266 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms