RNA–Protein interactions for RNA: ENST00000638114.1

CACNA1A-259, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 3

Gene CACNA1A, Length 517 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-259ENST00000638114 DZIP1LQ8IYY4 767 aaKnown RBP20.8■□□□□ 0.92
CACNA1A-259ENST00000638114 CA12O43570 354 aa20.79■□□□□ 0.92
CACNA1A-259ENST00000638114 ARMC9Q7Z3E5 817 aa20.79■□□□□ 0.92
CACNA1A-259ENST00000638114 TDRD3Q9H7E2 651 aaKnown RBP20.79■□□□□ 0.92
CACNA1A-259ENST00000638114 GNL3LQ9NVN8 582 aaKnown RBP20.79■□□□□ 0.92
CACNA1A-259ENST00000638114 ZNF70Q9UC06 446 aaPredicted RBP20.79■□□□□ 0.92
CACNA1A-259ENST00000638114 SPDYE2Q495Y8 402 aa20.78■□□□□ 0.92
CACNA1A-259ENST00000638114 ITPRIPQ8IWB1 547 aa20.78■□□□□ 0.92
CACNA1A-259ENST00000638114 WDR66Q8TBY9 1149 aa20.78■□□□□ 0.92
CACNA1A-259ENST00000638114 ANGEL1Q9UNK9 670 aaKnown RBP20.78■□□□□ 0.92
CACNA1A-259ENST00000638114 MAST3O60307 1309 aa20.78■□□□□ 0.92
CACNA1A-259ENST00000638114 PNMA6EA0A0J9YXQ4 647 aa20.77■□□□□ 0.92
CACNA1A-259ENST00000638114 ADORA1P30542 326 aa20.77■□□□□ 0.92
CACNA1A-259ENST00000638114 PHKA1P46020 1223 aa20.77■□□□□ 0.92
CACNA1A-259ENST00000638114 HDLBPQ00341 1268 aaKnown RBP20.77■□□□□ 0.92
CACNA1A-259ENST00000638114 TFCP2Q12800 502 aa20.77■□□□□ 0.92
CACNA1A-259ENST00000638114 TNFAIP1Q13829 316 aa20.77■□□□□ 0.92
CACNA1A-259ENST00000638114 RASA3Q14644 834 aa20.77■□□□□ 0.92
CACNA1A-259ENST00000638114 TEKT1Q969V4 418 aa20.77■□□□□ 0.92
CACNA1A-259ENST00000638114 SUGT1Q9Y2Z0 365 aa20.77■□□□□ 0.92
CACNA1A-259ENST00000638114 RLBP1P12271 317 aa20.76■□□□□ 0.91
CACNA1A-259ENST00000638114 SUPT20HL1Q3ZLR7 823 aa20.76■□□□□ 0.91
CACNA1A-259ENST00000638114 FZD1Q9UP38 647 aa20.76■□□□□ 0.91
CACNA1A-259ENST00000638114 AKAP2Q9Y2D5 859 aa20.76■□□□□ 0.91
CACNA1A-259ENST00000638114 SSC5DA1L4H1 1573 aa20.76■□□□□ 0.91
CACNA1A-259ENST00000638114 TIMM10P62072 90 aa20.75■□□□□ 0.91
CACNA1A-259ENST00000638114 NBPF12Q5TAG4 269 aaPredicted RBP20.75■□□□□ 0.91
CACNA1A-259ENST00000638114 C1orf115Q9H7X2 142 aa20.75■□□□□ 0.91
CACNA1A-259ENST00000638114 A0A1B0GUL7 405 aa20.74■□□□□ 0.91
CACNA1A-259ENST00000638114 TCP10L2B9ZVM9 353 aa20.74■□□□□ 0.91
CACNA1A-259ENST00000638114 SEMA3EO15041 775 aa20.74■□□□□ 0.91
CACNA1A-259ENST00000638114 PPP1R12BO60237 982 aaPredicted RBP20.74■□□□□ 0.91
CACNA1A-259ENST00000638114 G3BP1Q13283 466 aaKnown RBP eCLIP20.74■□□□□ 0.91
CACNA1A-259ENST00000638114 CCDC102BQ68D86 513 aa20.74■□□□□ 0.91
CACNA1A-259ENST00000638114 ZDHHC15Q96MV8 337 aa20.74■□□□□ 0.91
CACNA1A-259ENST00000638114 DENND2AQ9ULE3 1009 aa20.74■□□□□ 0.91
CACNA1A-259ENST00000638114 TNNI2P48788 182 aa20.73■□□□□ 0.91
CACNA1A-259ENST00000638114 CSRNP1Q96S65 589 aa20.73■□□□□ 0.91
CACNA1A-259ENST00000638114 MRIQ9BWK5 157 aa20.73■□□□□ 0.91
CACNA1A-259ENST00000638114 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.73■□□□□ 0.91
CACNA1A-259ENST00000638114 AKAP11Q9UKA4 1901 aa20.72■□□□□ 0.91
CACNA1A-259ENST00000638114 CAPN15O75808 1086 aa20.72■□□□□ 0.91
CACNA1A-259ENST00000638114 PRDX5P30044 214 aa20.72■□□□□ 0.91
CACNA1A-259ENST00000638114 MKRN3Q13064 507 aaKnown RBP20.72■□□□□ 0.91
CACNA1A-259ENST00000638114 LDLRAD1Q5T700 205 aa20.72■□□□□ 0.91
CACNA1A-259ENST00000638114 REM2Q8IYK8 340 aaPredicted RBP20.72■□□□□ 0.91
CACNA1A-259ENST00000638114 XAGE2Q96GT9 111 aa20.72■□□□□ 0.91
CACNA1A-259ENST00000638114 NEUROD6Q96NK8 337 aa20.72■□□□□ 0.91
CACNA1A-259ENST00000638114 TMOD2Q9NZR1 351 aa20.72■□□□□ 0.91
CACNA1A-259ENST00000638114 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.72■□□□□ 0.91
CACNA1A-259ENST00000638114 ZBTB7BO15156 539 aaPredicted RBP20.71■□□□□ 0.91
CACNA1A-259ENST00000638114 LDHBP07195 334 aaKnown RBP20.71■□□□□ 0.91
CACNA1A-259ENST00000638114 CACNB3P54284 484 aa20.71■□□□□ 0.91
CACNA1A-259ENST00000638114 ATP8B2P98198 1209 aa20.71■□□□□ 0.91
CACNA1A-259ENST00000638114 MVPQ14764 893 aaKnown RBP20.71■□□□□ 0.91
CACNA1A-259ENST00000638114 MAP3K11Q16584 847 aa20.71■□□□□ 0.91
CACNA1A-259ENST00000638114 HHIPL2Q6UWX4 724 aa20.71■□□□□ 0.91
CACNA1A-259ENST00000638114 PANK1Q8TE04 598 aa20.71■□□□□ 0.91
CACNA1A-259ENST00000638114 TMEM39BQ9GZU3 492 aa20.71■□□□□ 0.91
CACNA1A-259ENST00000638114 RNF186Q9NXI6 227 aa20.71■□□□□ 0.91
CACNA1A-259ENST00000638114 TRPA1O75762 1119 aa20.7■□□□□ 0.9
CACNA1A-259ENST00000638114 OS9Q13438 667 aaPredicted RBP20.7■□□□□ 0.9
CACNA1A-259ENST00000638114 RASGRF1Q13972 1273 aa20.7■□□□□ 0.9
CACNA1A-259ENST00000638114 POLA2Q14181 598 aa20.7■□□□□ 0.9
CACNA1A-259ENST00000638114 APOBEC3HQ6NTF7 200 aaKnown RBP20.7■□□□□ 0.9
CACNA1A-259ENST00000638114 SAGE1Q9NXZ1 904 aa20.7■□□□□ 0.9
CACNA1A-259ENST00000638114 SALL1Q9NSC2 1324 aa20.7■□□□□ 0.9
CACNA1A-259ENST00000638114 IREB2P48200 963 aaKnown RBP20.69■□□□□ 0.9
CACNA1A-259ENST00000638114 DIXDC1Q155Q3 683 aa20.69■□□□□ 0.9
CACNA1A-259ENST00000638114 GORABQ5T7V8 394 aa20.69■□□□□ 0.9
CACNA1A-259ENST00000638114 CDAN1Q8IWY9 1227 aa20.69■□□□□ 0.9
CACNA1A-259ENST00000638114 SSH3Q8TE77 659 aa20.69■□□□□ 0.9
CACNA1A-259ENST00000638114 SLC10A4Q96EP9 437 aa20.69■□□□□ 0.9
CACNA1A-259ENST00000638114 CASP8AP2Q9UKL3 1982 aa20.68■□□□□ 0.9
CACNA1A-259ENST00000638114 USP2O75604 605 aaPredicted RBP20.68■□□□□ 0.9
CACNA1A-259ENST00000638114 MS4A1P11836 297 aa20.68■□□□□ 0.9
CACNA1A-259ENST00000638114 SPRYD7Q5W111 196 aa20.68■□□□□ 0.9
CACNA1A-259ENST00000638114 ZGPATQ8N5A5 531 aaKnown RBP20.68■□□□□ 0.9
CACNA1A-259ENST00000638114 CLMNQ96JQ2 1002 aa20.68■□□□□ 0.9
CACNA1A-259ENST00000638114 TEPSINQ96N21 525 aa20.68■□□□□ 0.9
CACNA1A-259ENST00000638114 DAGLAQ9Y4D2 1042 aa20.68■□□□□ 0.9
CACNA1A-259ENST00000638114 ZBTB22O15209 634 aa20.67■□□□□ 0.9
CACNA1A-259ENST00000638114 SURF6O75683 361 aaKnown RBP20.67■□□□□ 0.9
CACNA1A-259ENST00000638114 ABCF2Q9UG63 623 aa20.67■□□□□ 0.9
CACNA1A-259ENST00000638114 RCAN3Q9UKA8 241 aa20.67■□□□□ 0.9
CACNA1A-259ENST00000638114 PDS5AQ29RF7 1337 aaKnown RBP20.67■□□□□ 0.9
CACNA1A-259ENST00000638114 UNCXA6NJT0 531 aa20.66■□□□□ 0.9
CACNA1A-259ENST00000638114 SREBF2Q12772 1141 aa20.66■□□□□ 0.9
CACNA1A-259ENST00000638114 FKBP1CQ5VVH2 108 aa20.66■□□□□ 0.9
CACNA1A-259ENST00000638114 ANKRD13AQ8IZ07 590 aa20.66■□□□□ 0.9
CACNA1A-259ENST00000638114 FAM83AQ86UY5 434 aa20.65■□□□□ 0.9
CACNA1A-259ENST00000638114 DZIP1Q86YF9 867 aaKnown RBP20.65■□□□□ 0.9
CACNA1A-259ENST00000638114 OTOFQ9HC10 1997 aa20.65■□□□□ 0.9
CACNA1A-259ENST00000638114 TM4SF4P48230 202 aa20.64■□□□□ 0.89
CACNA1A-259ENST00000638114 SPTY2D1Q68D10 685 aaPredicted RBP20.64■□□□□ 0.89
CACNA1A-259ENST00000638114 CDC42EP5Q6NZY7 148 aa20.64■□□□□ 0.89
CACNA1A-259ENST00000638114 CEP85Q6P2H3 762 aa20.64■□□□□ 0.89
CACNA1A-259ENST00000638114 WNK4Q96J92 1243 aa20.64■□□□□ 0.89
CACNA1A-259ENST00000638114 MYH2Q9UKX2 1941 aa20.64■□□□□ 0.89
CACNA1A-259ENST00000638114 ZBTB48P10074 688 aaPredicted RBP20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms