RNA–Protein interactions for RNA: ENST00000637594.1

CLN8-214, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5

Gene CLN8, Length 406 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-214ENST00000637594 TBC1D22AQ8WUA7 517 aa11.11□□□□□ -0.63
CLN8-214ENST00000637594 ARMC5Q96C12 935 aa11.11□□□□□ -0.63
CLN8-214ENST00000637594 OPTNQ96CV9 577 aa11.11□□□□□ -0.63
CLN8-214ENST00000637594 JAG2Q9Y219 1238 aa11.11□□□□□ -0.63
CLN8-214ENST00000637594 SUGT1Q9Y2Z0 365 aa11.11□□□□□ -0.63
CLN8-214ENST00000637594 LAMB1P07942 1786 aa11.11□□□□□ -0.63
CLN8-214ENST00000637594 ZNF521Q96K83 1311 aa11.1□□□□□ -0.63
CLN8-214ENST00000637594 KIF16BQ96L93 1317 aa11.1□□□□□ -0.63
CLN8-214ENST00000637594 PDE8BO95263 885 aa11.1□□□□□ -0.63
CLN8-214ENST00000637594 TNNI2P48788 182 aa11.1□□□□□ -0.63
CLN8-214ENST00000637594 GTF2A2P52657 109 aa11.1□□□□□ -0.63
CLN8-214ENST00000637594 CAVIN4Q5BKX8 364 aa11.1□□□□□ -0.63
CLN8-214ENST00000637594 SLC4A10Q6U841 1118 aa11.1□□□□□ -0.63
CLN8-214ENST00000637594 VGLL2Q8N8G2 317 aa11.1□□□□□ -0.63
CLN8-214ENST00000637594 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.1□□□□□ -0.63
CLN8-214ENST00000637594 ZDHHC15Q96MV8 337 aa11.1□□□□□ -0.63
CLN8-214ENST00000637594 ECM29Q5VYK3 1845 aa11.09□□□□□ -0.63
CLN8-214ENST00000637594 ARHGEF6Q15052 776 aa11.09□□□□□ -0.63
CLN8-214ENST00000637594 FAM83AQ86UY5 434 aa11.09□□□□□ -0.63
CLN8-214ENST00000637594 MRPL50Q8N5N7 158 aaKnown RBP11.09□□□□□ -0.63
CLN8-214ENST00000637594 ANKRD44Q8N8A2 993 aa11.09□□□□□ -0.63
CLN8-214ENST00000637594 GCC1Q96CN9 775 aa11.09□□□□□ -0.63
CLN8-214ENST00000637594 TMEM39BQ9GZU3 492 aa11.09□□□□□ -0.63
CLN8-214ENST00000637594 BICC1Q9H694 974 aaKnown RBP11.09□□□□□ -0.63
CLN8-214ENST00000637594 ELP3Q9H9T3 547 aa11.09□□□□□ -0.63
CLN8-214ENST00000637594 EFCC1Q9HA90 598 aa11.09□□□□□ -0.63
CLN8-214ENST00000637594 ZCCHC17Q9NP64 241 aaKnown RBP11.09□□□□□ -0.63
CLN8-214ENST00000637594 PTPRCP08575 1304 aa11.09□□□□□ -0.63
CLN8-214ENST00000637594 TCP10L2B9ZVM9 353 aa11.08□□□□□ -0.64
CLN8-214ENST00000637594 ZBTB22O15209 634 aa11.08□□□□□ -0.64
CLN8-214ENST00000637594 FGFR2P21802 821 aa11.08□□□□□ -0.64
CLN8-214ENST00000637594 CAP1Q01518 475 aa11.08□□□□□ -0.64
CLN8-214ENST00000637594 VGLL4Q14135 290 aa11.08□□□□□ -0.64
CLN8-214ENST00000637594 GRIK5Q16478 980 aa11.08□□□□□ -0.64
CLN8-214ENST00000637594 LRRC24Q50LG9 513 aa11.08□□□□□ -0.64
CLN8-214ENST00000637594 APOBEC3HQ6NTF7 200 aaKnown RBP11.08□□□□□ -0.64
CLN8-214ENST00000637594 HHIPL2Q6UWX4 724 aa11.08□□□□□ -0.64
CLN8-214ENST00000637594 VPS37DQ86XT2 251 aa11.08□□□□□ -0.64
CLN8-214ENST00000637594 CD99L2Q8TCZ2 262 aa11.08□□□□□ -0.64
CLN8-214ENST00000637594 BRI3BPQ8WY22 251 aa11.08□□□□□ -0.64
CLN8-214ENST00000637594 TEKT1Q969V4 418 aa11.08□□□□□ -0.64
CLN8-214ENST00000637594 HOOK2Q96ED9 719 aa11.08□□□□□ -0.64
CLN8-214ENST00000637594 USP44Q9H0E7 712 aa11.08□□□□□ -0.64
CLN8-214ENST00000637594 ZFYVE28Q9HCC9 887 aa11.08□□□□□ -0.64
CLN8-214ENST00000637594 PDE4DIPQ5VU43 2346 aa11.08□□□□□ -0.64
CLN8-214ENST00000637594 A0A1B0GUL6 1792 aa11.08□□□□□ -0.64
CLN8-214ENST00000637594 POTEFA5A3E0 1075 aa11.07□□□□□ -0.64
CLN8-214ENST00000637594 SPDYE5A6NIY4 337 aa11.07□□□□□ -0.64
CLN8-214ENST00000637594 BCAMP50895 628 aa11.07□□□□□ -0.64
CLN8-214ENST00000637594 METTL24Q5JXM2 366 aa11.07□□□□□ -0.64
CLN8-214ENST00000637594 ERO1BQ86YB8 467 aa11.07□□□□□ -0.64
CLN8-214ENST00000637594 CDAN1Q8IWY9 1227 aa11.07□□□□□ -0.64
CLN8-214ENST00000637594 CSADQ9Y600 493 aa11.07□□□□□ -0.64
CLN8-214ENST00000637594 CCL15-CCL14A0A0B4J2E2 113 aa11.06□□□□□ -0.64
CLN8-214ENST00000637594 ZNF316A6NFI3 1004 aaPredicted RBP11.06□□□□□ -0.64
CLN8-214ENST00000637594 TLR2O60603 784 aa11.06□□□□□ -0.64
CLN8-214ENST00000637594 GNRH1P01148 92 aa11.06□□□□□ -0.64
CLN8-214ENST00000637594 CETPP11597 493 aa11.06□□□□□ -0.64
CLN8-214ENST00000637594 CCL15Q16663 113 aa11.06□□□□□ -0.64
CLN8-214ENST00000637594 NBPF11Q86T75 865 aa11.06□□□□□ -0.64
CLN8-214ENST00000637594 CNKSR2Q8WXI2 1034 aa11.06□□□□□ -0.64
CLN8-214ENST00000637594 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.06□□□□□ -0.64
CLN8-214ENST00000637594 MAST3O60307 1309 aa11.06□□□□□ -0.64
CLN8-214ENST00000637594 FRAT2O75474 233 aaPredicted RBP11.05□□□□□ -0.64
CLN8-214ENST00000637594 IFIT1P09914 478 aaKnown RBP11.05□□□□□ -0.64
CLN8-214ENST00000637594 ZEB1P37275 1124 aaPredicted RBP11.05□□□□□ -0.64
CLN8-214ENST00000637594 RFX5P48382 616 aaPredicted RBP11.05□□□□□ -0.64
CLN8-214ENST00000637594 PPATQ06203 517 aa11.05□□□□□ -0.64
CLN8-214ENST00000637594 PUM3Q15397 648 aaKnown RBP11.05□□□□□ -0.64
CLN8-214ENST00000637594 TAF1CQ15572 869 aaPredicted RBP11.05□□□□□ -0.64
CLN8-214ENST00000637594 FAM9BQ8IZU0 186 aa11.05□□□□□ -0.64
CLN8-214ENST00000637594 FAM43AQ8N2R8 423 aa11.05□□□□□ -0.64
CLN8-214ENST00000637594 WDR66Q8TBY9 1149 aa11.05□□□□□ -0.64
CLN8-214ENST00000637594 ZNF333Q96JL9 665 aa11.05□□□□□ -0.64
CLN8-214ENST00000637594 ZNF112Q9UJU3 913 aa11.05□□□□□ -0.64
CLN8-214ENST00000637594 FBXO3Q9UK99 471 aa11.05□□□□□ -0.64
CLN8-214ENST00000637594 IQSEC3Q9UPP2 1182 aaPredicted RBP11.05□□□□□ -0.64
CLN8-214ENST00000637594 SNCAIPQ9Y6H5 919 aa11.05□□□□□ -0.64
CLN8-214ENST00000637594 HTTP42858 3142 aa11.04□□□□□ -0.64
CLN8-214ENST00000637594 BTBD19C9JJ37 291 aa11.04□□□□□ -0.64
CLN8-214ENST00000637594 E9PSI1 815 aa11.04□□□□□ -0.64
CLN8-214ENST00000637594 EYA2O00167 538 aa11.04□□□□□ -0.64
CLN8-214ENST00000637594 WDHD1O75717 1129 aaPredicted RBP11.04□□□□□ -0.64
CLN8-214ENST00000637594 EN2P19622 333 aaPredicted RBP11.04□□□□□ -0.64
CLN8-214ENST00000637594 PRMT2P55345 433 aa11.04□□□□□ -0.64
CLN8-214ENST00000637594 CHAF1AQ13111 956 aaPredicted RBP11.04□□□□□ -0.64
CLN8-214ENST00000637594 PPIL2Q13356 520 aa11.04□□□□□ -0.64
CLN8-214ENST00000637594 SNAPC2Q13487 334 aa11.04□□□□□ -0.64
CLN8-214ENST00000637594 ALDH1L2Q3SY69 923 aa11.04□□□□□ -0.64
CLN8-214ENST00000637594 DCAF15Q66K64 600 aa11.04□□□□□ -0.64
CLN8-214ENST00000637594 FAM151AQ8WW52 585 aa11.04□□□□□ -0.64
CLN8-214ENST00000637594 SSH1Q8WYL5 1049 aa11.04□□□□□ -0.64
CLN8-214ENST00000637594 LPIN2Q92539 896 aa11.04□□□□□ -0.64
CLN8-214ENST00000637594 OTUD5Q96G74 571 aa11.04□□□□□ -0.64
CLN8-214ENST00000637594 TMOD2Q9NZR1 351 aa11.04□□□□□ -0.64
CLN8-214ENST00000637594 RPAP1Q9BWH6 1393 aaPredicted RBP11.03□□□□□ -0.64
CLN8-214ENST00000637594 IRF6O14896 467 aa11.03□□□□□ -0.64
CLN8-214ENST00000637594 CACNB3P54284 484 aa11.03□□□□□ -0.64
CLN8-214ENST00000637594 SLFN5Q08AF3 891 aa11.03□□□□□ -0.64
CLN8-214ENST00000637594 C17orf99Q6UX52 265 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms