RNA–Protein interactions for RNA: ENST00000637538.1

CLCN2-220, Transcript of chloride voltage-gated channel 2, humanhuman

TSL 5

Gene CLCN2, Length 1,545 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2-220ENST00000637538 PIM2Q9P1W9 311 aa20.05■□□□□ 0.8
CLCN2-220ENST00000637538 CCDC88AQ3V6T2 1871 aa20.05■□□□□ 0.8
CLCN2-220ENST00000637538 ZNF646O15015 1829 aaPredicted RBP20.04■□□□□ 0.8
CLCN2-220ENST00000637538 GRIN3BO60391 1043 aa20.04■□□□□ 0.8
CLCN2-220ENST00000637538 CCDC93Q567U6 631 aa20.04■□□□□ 0.8
CLCN2-220ENST00000637538 CREB3L3Q68CJ9 461 aa20.04■□□□□ 0.8
CLCN2-220ENST00000637538 SPTY2D1Q68D10 685 aaPredicted RBP20.04■□□□□ 0.8
CLCN2-220ENST00000637538 STRBPQ96SI9 672 aaKnown RBP20.04■□□□□ 0.8
CLCN2-220ENST00000637538 PSMD1Q99460 953 aa20.04■□□□□ 0.8
CLCN2-220ENST00000637538 JAG2Q9Y219 1238 aa20.04■□□□□ 0.8
CLCN2-220ENST00000637538 SLC27A2O14975 620 aa20.03■□□□□ 0.8
CLCN2-220ENST00000637538 CYP7A1P22680 504 aa20.03■□□□□ 0.8
CLCN2-220ENST00000637538 MECOMQ03112 1051 aa20.03■□□□□ 0.8
CLCN2-220ENST00000637538 TSGA10IPQ3SY00 556 aa20.03■□□□□ 0.8
CLCN2-220ENST00000637538 RTKN2Q8IZC4 609 aa20.03■□□□□ 0.8
CLCN2-220ENST00000637538 SUPT20HQ8NEM7 779 aa20.03■□□□□ 0.8
CLCN2-220ENST00000637538 SNX21Q969T3 373 aa20.03■□□□□ 0.8
CLCN2-220ENST00000637538 KIAA2012Q0VF49 1180 aa20.02■□□□□ 0.8
CLCN2-220ENST00000637538 GRIK5Q16478 980 aa20.02■□□□□ 0.79
CLCN2-220ENST00000637538 NAA16Q6N069 864 aaPredicted RBP20.02■□□□□ 0.79
CLCN2-220ENST00000637538 TBC1D22AQ8WUA7 517 aa20.02■□□□□ 0.79
CLCN2-220ENST00000637538 RIOK1Q9BRS2 568 aaKnown RBP20.02■□□□□ 0.79
CLCN2-220ENST00000637538 TBC1D2Q9BYX2 928 aa20.02■□□□□ 0.79
CLCN2-220ENST00000637538 MBD4O95243 580 aa20.01■□□□□ 0.79
CLCN2-220ENST00000637538 DOK7Q18PE1 504 aa20.01■□□□□ 0.79
CLCN2-220ENST00000637538 DALRD3Q5D0E6 543 aaKnown RBP20.01■□□□□ 0.79
CLCN2-220ENST00000637538 SOGA3Q5TF21 947 aa20.01■□□□□ 0.79
CLCN2-220ENST00000637538 PODNQ7Z5L7 613 aa20.01■□□□□ 0.79
CLCN2-220ENST00000637538 AIDAQ96BJ3 306 aa20.01■□□□□ 0.79
CLCN2-220ENST00000637538 RPAP1Q9BWH6 1393 aaPredicted RBP20■□□□□ 0.79
CLCN2-220ENST00000637538 FER1L6Q2WGJ9 1857 aa20■□□□□ 0.79
CLCN2-220ENST00000637538 CD2BP2O95400 341 aaKnown RBP20■□□□□ 0.79
CLCN2-220ENST00000637538 LDHBP07195 334 aaKnown RBP20■□□□□ 0.79
CLCN2-220ENST00000637538 LCORLQ8N3X6 602 aa20■□□□□ 0.79
CLCN2-220ENST00000637538 IL27Q8NEV9 243 aa20■□□□□ 0.79
CLCN2-220ENST00000637538 TAF6LQ9Y6J9 622 aa20■□□□□ 0.79
CLCN2-220ENST00000637538 SCN9AQ15858 1988 aa20■□□□□ 0.79
CLCN2-220ENST00000637538 ZMYM6O95789 1325 aa19.99■□□□□ 0.79
CLCN2-220ENST00000637538 CYP21A2P08686 494 aa19.99■□□□□ 0.79
CLCN2-220ENST00000637538 GTF2IP78347 998 aa19.99■□□□□ 0.79
CLCN2-220ENST00000637538 ALX1Q15699 326 aa19.99■□□□□ 0.79
CLCN2-220ENST00000637538 RNF20Q5VTR2 975 aa19.99■□□□□ 0.79
CLCN2-220ENST00000637538 TM6SF1Q9BZW5 370 aa19.99■□□□□ 0.79
CLCN2-220ENST00000637538 ARMT1Q9H993 441 aa19.99■□□□□ 0.79
CLCN2-220ENST00000637538 FGAP02671 866 aa19.98■□□□□ 0.79
CLCN2-220ENST00000637538 ZKSCAN1P17029 563 aaPredicted RBP19.98■□□□□ 0.79
CLCN2-220ENST00000637538 AOC3Q16853 763 aa19.98■□□□□ 0.79
CLCN2-220ENST00000637538 ADCK5Q3MIX3 580 aa19.98■□□□□ 0.79
CLCN2-220ENST00000637538 MFSD14BQ5SR56 506 aa19.98■□□□□ 0.79
CLCN2-220ENST00000637538 MIGA1Q8NAN2 632 aa19.98■□□□□ 0.79
CLCN2-220ENST00000637538 VPS33BQ9H267 617 aa19.98■□□□□ 0.79
CLCN2-220ENST00000637538 DBNDD1Q9H9R9 158 aa19.98■□□□□ 0.79
CLCN2-220ENST00000637538 SUGT1Q9Y2Z0 365 aa19.98■□□□□ 0.79
CLCN2-220ENST00000637538 COL4A5P29400 1685 aa19.98■□□□□ 0.79
CLCN2-220ENST00000637538 LAMA4Q16363 1823 aa19.98■□□□□ 0.79
CLCN2-220ENST00000637538 MAGEB6P1A0A0J9YX57 407 aa19.97■□□□□ 0.79
CLCN2-220ENST00000637538 PATL2C9JE40 543 aaKnown RBP19.97■□□□□ 0.79
CLCN2-220ENST00000637538 ECE2O60344 883 aa19.97■□□□□ 0.79
CLCN2-220ENST00000637538 GNAT2P19087 354 aa19.97■□□□□ 0.79
CLCN2-220ENST00000637538 BECN1Q14457 450 aa19.97■□□□□ 0.79
CLCN2-220ENST00000637538 DZIP1Q86YF9 867 aaKnown RBP19.97■□□□□ 0.79
CLCN2-220ENST00000637538 CERS5Q8N5B7 392 aa19.97■□□□□ 0.79
CLCN2-220ENST00000637538 EPB41L4AQ9HCS5 686 aaPredicted RBP19.97■□□□□ 0.79
CLCN2-220ENST00000637538 BCS1LQ9Y276 419 aa19.97■□□□□ 0.79
CLCN2-220ENST00000637538 UTRNP46939 3433 aa19.97■□□□□ 0.79
CLCN2-220ENST00000637538 PSME4Q14997 1843 aa19.97■□□□□ 0.79
CLCN2-220ENST00000637538 GSG1L2A8MUP6 293 aa19.97■□□□□ 0.79
CLCN2-220ENST00000637538 FKBP1AP62942 108 aaKnown RBP19.97■□□□□ 0.79
CLCN2-220ENST00000637538 TTLL5Q6EMB2 1281 aa19.97■□□□□ 0.79
CLCN2-220ENST00000637538 CTNNA3Q9UI47 895 aa19.97■□□□□ 0.79
CLCN2-220ENST00000637538 ARFGEF1Q9Y6D6 1849 aa19.96■□□□□ 0.79
CLCN2-220ENST00000637538 GSTO1P78417 241 aa19.96■□□□□ 0.79
CLCN2-220ENST00000637538 FAM163AQ96GL9 167 aaPredicted RBP19.96■□□□□ 0.79
CLCN2-220ENST00000637538 ZSWIM6Q9HCJ5 1215 aa19.96■□□□□ 0.79
CLCN2-220ENST00000637538 MYH2Q9UKX2 1941 aa19.95■□□□□ 0.78
CLCN2-220ENST00000637538 PPIP5K2O43314 1243 aa19.95■□□□□ 0.78
CLCN2-220ENST00000637538 PRKAB2O43741 272 aa19.95■□□□□ 0.78
CLCN2-220ENST00000637538 NEK4P51957 841 aa19.95■□□□□ 0.78
CLCN2-220ENST00000637538 DYNLL1P63167 89 aaKnown RBP19.95■□□□□ 0.78
CLCN2-220ENST00000637538 STRIP1Q5VSL9 837 aa19.95■□□□□ 0.78
CLCN2-220ENST00000637538 TTC14Q96N46 770 aa19.95■□□□□ 0.78
CLCN2-220ENST00000637538 UPF3BQ9BZI7 483 aaKnown RBP19.95■□□□□ 0.78
CLCN2-220ENST00000637538 KCNQ5Q9NR82 932 aa19.95■□□□□ 0.78
CLCN2-220ENST00000637538 MROH7-TTC4A0A0A0MT08 1334 aa19.94■□□□□ 0.78
CLCN2-220ENST00000637538 GAKO14976 1311 aa19.94■□□□□ 0.78
CLCN2-220ENST00000637538 YDJCA8MPS7 323 aa19.94■□□□□ 0.78
CLCN2-220ENST00000637538 G3V3G9 751 aa19.94■□□□□ 0.78
CLCN2-220ENST00000637538 PPP4CP60510 307 aa19.94■□□□□ 0.78
CLCN2-220ENST00000637538 KRT32Q14532 448 aa19.94■□□□□ 0.78
CLCN2-220ENST00000637538 DIXDC1Q155Q3 683 aa19.94■□□□□ 0.78
CLCN2-220ENST00000637538 DACT2Q5SW24 774 aa19.94■□□□□ 0.78
CLCN2-220ENST00000637538 DCAF8Q5TAQ9 597 aa19.94■□□□□ 0.78
CLCN2-220ENST00000637538 STOX1Q6ZVD7 989 aa19.94■□□□□ 0.78
CLCN2-220ENST00000637538 IFNL3Q8IZI9 196 aa19.94■□□□□ 0.78
CLCN2-220ENST00000637538 JAKMIP1Q96N16 626 aaKnown RBP19.94■□□□□ 0.78
CLCN2-220ENST00000637538 SLC4A4Q9Y6R1 1079 aa19.94■□□□□ 0.78
CLCN2-220ENST00000637538 ST18O60284 1047 aa19.93■□□□□ 0.78
CLCN2-220ENST00000637538 SLC4A3P48751 1232 aa19.93■□□□□ 0.78
CLCN2-220ENST00000637538 COL9A3Q14050 684 aaPredicted RBP19.93■□□□□ 0.78
CLCN2-220ENST00000637538 HSCBQ8IWL3 235 aa19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms