RNA–Protein interactions for RNA: ENST00000637212.1

LINC00643-207, long intergenic non-protein coding RNA 643, humanhuman

BASIC

Gene LINC00643, Length 734 nt, Biotype transcribed unitary pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-207ENST00000637212 MMP14P50281 582 aa16.09■□□□□ 0.17
LINC00643-207ENST00000637212 TNIP1Q15025 636 aa16.09■□□□□ 0.17
LINC00643-207ENST00000637212 DZIP1Q86YF9 867 aaKnown RBP16.09■□□□□ 0.17
LINC00643-207ENST00000637212 KCNQ5Q9NR82 932 aa16.09■□□□□ 0.17
LINC00643-207ENST00000637212 JAG2Q9Y219 1238 aa16.09■□□□□ 0.17
LINC00643-207ENST00000637212 GRIN3BO60391 1043 aa16.08■□□□□ 0.16
LINC00643-207ENST00000637212 LMNB1P20700 586 aa16.08■□□□□ 0.16
LINC00643-207ENST00000637212 HDLBPQ00341 1268 aaKnown RBP16.08■□□□□ 0.16
LINC00643-207ENST00000637212 CERS3Q8IU89 383 aa16.08■□□□□ 0.16
LINC00643-207ENST00000637212 PUS7LQ9H0K6 701 aaKnown RBP16.08■□□□□ 0.16
LINC00643-207ENST00000637212 MAST3O60307 1309 aa16.08■□□□□ 0.16
LINC00643-207ENST00000637212 MYO3BQ8WXR4 1341 aa16.08■□□□□ 0.16
LINC00643-207ENST00000637212 CHGBP05060 677 aa16.07■□□□□ 0.16
LINC00643-207ENST00000637212 YBX3P16989 372 aaKnown RBP eCLIP16.07■□□□□ 0.16
LINC00643-207ENST00000637212 GNAT2P19087 354 aa16.07■□□□□ 0.16
LINC00643-207ENST00000637212 SLFNL1Q499Z3 407 aa16.07■□□□□ 0.16
LINC00643-207ENST00000637212 CERS5Q8N5B7 392 aa16.07■□□□□ 0.16
LINC00643-207ENST00000637212 ZNF384Q8TF68 577 aa16.07■□□□□ 0.16
LINC00643-207ENST00000637212 FBXW7Q969H0 707 aa16.07■□□□□ 0.16
LINC00643-207ENST00000637212 SEC62Q99442 399 aaKnown RBP16.07■□□□□ 0.16
LINC00643-207ENST00000637212 LSG1Q9H089 658 aaKnown RBP16.07■□□□□ 0.16
LINC00643-207ENST00000637212 IL25Q9H293 177 aa16.07■□□□□ 0.16
LINC00643-207ENST00000637212 ANO2Q9NQ90 1003 aa16.07■□□□□ 0.16
LINC00643-207ENST00000637212 CCDC171Q6TFL3 1326 aa16.07■□□□□ 0.16
LINC00643-207ENST00000637212 AKAP11Q9UKA4 1901 aa16.06■□□□□ 0.16
LINC00643-207ENST00000637212 M0R2C6 588 aa16.06■□□□□ 0.16
LINC00643-207ENST00000637212 FZD9O00144 591 aa16.06■□□□□ 0.16
LINC00643-207ENST00000637212 BAG3O95817 575 aa16.06■□□□□ 0.16
LINC00643-207ENST00000637212 PPP4CP60510 307 aa16.06■□□□□ 0.16
LINC00643-207ENST00000637212 RSBN1LQ6PCB5 846 aaPredicted RBP16.06■□□□□ 0.16
LINC00643-207ENST00000637212 MAP4K1Q92918 833 aa16.06■□□□□ 0.16
LINC00643-207ENST00000637212 AIDAQ96BJ3 306 aa16.06■□□□□ 0.16
LINC00643-207ENST00000637212 STRBPQ96SI9 672 aaKnown RBP16.06■□□□□ 0.16
LINC00643-207ENST00000637212 DSCC1Q9BVC3 393 aa16.06■□□□□ 0.16
LINC00643-207ENST00000637212 RPAP1Q9BWH6 1393 aaPredicted RBP16.05■□□□□ 0.16
LINC00643-207ENST00000637212 MAGEB6P1A0A0J9YX57 407 aa16.05■□□□□ 0.16
LINC00643-207ENST00000637212 GPAA1O43292 621 aa16.05■□□□□ 0.16
LINC00643-207ENST00000637212 RBM25P49756 843 aaKnown RBP16.05■□□□□ 0.16
LINC00643-207ENST00000637212 PRELPP51888 382 aa16.05■□□□□ 0.16
LINC00643-207ENST00000637212 EIF6P56537 245 aaKnown RBP16.05■□□□□ 0.16
LINC00643-207ENST00000637212 RASSF7Q02833 373 aa16.05■□□□□ 0.16
LINC00643-207ENST00000637212 CXCL9Q07325 125 aa16.05■□□□□ 0.16
LINC00643-207ENST00000637212 GRIK5Q16478 980 aa16.05■□□□□ 0.16
LINC00643-207ENST00000637212 GPR162Q16538 588 aa16.05■□□□□ 0.16
LINC00643-207ENST00000637212 CIAPIN1Q6FI81 312 aa16.05■□□□□ 0.16
LINC00643-207ENST00000637212 HHIPL2Q6UWX4 724 aa16.05■□□□□ 0.16
LINC00643-207ENST00000637212 ZNF589Q86UQ0 364 aaPredicted RBP16.05■□□□□ 0.16
LINC00643-207ENST00000637212 AGBL3Q8NEM8 1001 aa16.05■□□□□ 0.16
LINC00643-207ENST00000637212 C22orf23Q9BZE7 217 aa16.05■□□□□ 0.16
LINC00643-207ENST00000637212 TTF2Q9UNY4 1162 aaKnown RBP16.05■□□□□ 0.16
LINC00643-207ENST00000637212 BRCA1P38398 1863 aaKnown RBP16.04■□□□□ 0.16
LINC00643-207ENST00000637212 GPR75-ASB3A0A0A6YYF3 556 aa16.04■□□□□ 0.16
LINC00643-207ENST00000637212 PATL2C9JE40 543 aaKnown RBP16.04■□□□□ 0.16
LINC00643-207ENST00000637212 PSMD14O00487 310 aa16.04■□□□□ 0.16
LINC00643-207ENST00000637212 RAD17O75943 681 aa16.04■□□□□ 0.16
LINC00643-207ENST00000637212 CCDC129Q6ZRS4 1044 aa16.04■□□□□ 0.16
LINC00643-207ENST00000637212 GMLQ99445 158 aa16.04■□□□□ 0.16
LINC00643-207ENST00000637212 RIOK1Q9BRS2 568 aaKnown RBP16.04■□□□□ 0.16
LINC00643-207ENST00000637212 NOL10Q9BSC4 688 aaKnown RBP16.04■□□□□ 0.16
LINC00643-207ENST00000637212 CTNNA3Q9UI47 895 aa16.04■□□□□ 0.16
LINC00643-207ENST00000637212 U3KPZ7 1027 aaPredicted RBP16.04■□□□□ 0.16
LINC00643-207ENST00000637212 MROH7-TTC4A0A0A0MT08 1334 aa16.03■□□□□ 0.16
LINC00643-207ENST00000637212 GAKO14976 1311 aa16.03■□□□□ 0.16
LINC00643-207ENST00000637212 HSPD1P10809 573 aaKnown RBP16.03■□□□□ 0.16
LINC00643-207ENST00000637212 PLCG2P16885 1265 aa16.03■□□□□ 0.16
LINC00643-207ENST00000637212 MCCP23508 829 aa16.03■□□□□ 0.16
LINC00643-207ENST00000637212 RPS12P25398 132 aaKnown RBP16.03■□□□□ 0.16
LINC00643-207ENST00000637212 PTH1RQ03431 593 aa16.03■□□□□ 0.16
LINC00643-207ENST00000637212 ALX1Q15699 326 aa16.03■□□□□ 0.16
LINC00643-207ENST00000637212 ADGRA1Q86SQ6 560 aa16.03■□□□□ 0.16
LINC00643-207ENST00000637212 TBC1D32Q96NH3 1257 aa16.03■□□□□ 0.16
LINC00643-207ENST00000637212 MXD3Q9BW11 206 aa16.03■□□□□ 0.16
LINC00643-207ENST00000637212 TSHZ2Q9NRE2 1034 aa16.03■□□□□ 0.16
LINC00643-207ENST00000637212 SERPINA10Q9UK55 444 aa16.03■□□□□ 0.16
LINC00643-207ENST00000637212 MBD4O95243 580 aa16.02■□□□□ 0.16
LINC00643-207ENST00000637212 GIMAP6Q6P9H5 292 aa16.02■□□□□ 0.16
LINC00643-207ENST00000637212 KCNB2Q92953 911 aa16.02■□□□□ 0.16
LINC00643-207ENST00000637212 TEKT1Q969V4 418 aa16.02■□□□□ 0.16
LINC00643-207ENST00000637212 ZDHHC15Q96MV8 337 aa16.02■□□□□ 0.16
LINC00643-207ENST00000637212 ARMT1Q9H993 441 aa16.02■□□□□ 0.16
LINC00643-207ENST00000637212 HDAC9Q9UKV0 1011 aa16.02■□□□□ 0.16
LINC00643-207ENST00000637212 HSPA4P34932 840 aa16.01■□□□□ 0.15
LINC00643-207ENST00000637212 ANAPC15P60006 121 aa16.01■□□□□ 0.15
LINC00643-207ENST00000637212 NECTIN1Q15223 517 aa16.01■□□□□ 0.15
LINC00643-207ENST00000637212 DIXDC1Q155Q3 683 aa16.01■□□□□ 0.15
LINC00643-207ENST00000637212 KIAA0825Q8IV33 1275 aa16.01■□□□□ 0.15
LINC00643-207ENST00000637212 LCORLQ8N3X6 602 aa16.01■□□□□ 0.15
LINC00643-207ENST00000637212 OGFOD1Q8N543 542 aa16.01■□□□□ 0.15
LINC00643-207ENST00000637212 MIGA1Q8NAN2 632 aa16.01■□□□□ 0.15
LINC00643-207ENST00000637212 DPF2Q92785 391 aa16.01■□□□□ 0.15
LINC00643-207ENST00000637212 IL17RAQ96F46 866 aa16.01■□□□□ 0.15
LINC00643-207ENST00000637212 CRNKL1Q9BZJ0 848 aaKnown RBP16.01■□□□□ 0.15
LINC00643-207ENST00000637212 NACAP1Q9BZK3 213 aa16.01■□□□□ 0.15
LINC00643-207ENST00000637212 CACNA1SQ13698 1873 aa16■□□□□ 0.15
LINC00643-207ENST00000637212 F8W031 263 aaPredicted RBP16■□□□□ 0.15
LINC00643-207ENST00000637212 USP17L8P0C7I0 530 aa16■□□□□ 0.15
LINC00643-207ENST00000637212 CRKP46108 304 aa16■□□□□ 0.15
LINC00643-207ENST00000637212 VPS53Q5VIR6 699 aa16■□□□□ 0.15
LINC00643-207ENST00000637212 RNF20Q5VTR2 975 aa16■□□□□ 0.15
LINC00643-207ENST00000637212 IL27Q8NEV9 243 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms