RNA–Protein interactions for RNA: ENST00000637117.1

CACNA1A-236, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,124 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-236ENST00000637117 NBPF9Q3BBW0 867 aa11.87□□□□□ -0.51
CACNA1A-236ENST00000637117 GPR153Q6NV75 609 aa11.87□□□□□ -0.51
CACNA1A-236ENST00000637117 ANKRD18AQ8IVF6 992 aa11.87□□□□□ -0.51
CACNA1A-236ENST00000637117 CCDC191Q8NCU4 936 aa11.87□□□□□ -0.51
CACNA1A-236ENST00000637117 JARID2Q92833 1246 aaPredicted RBP11.87□□□□□ -0.51
CACNA1A-236ENST00000637117 RUNDC1Q96C34 613 aa11.87□□□□□ -0.51
CACNA1A-236ENST00000637117 MYD88Q99836 296 aa11.87□□□□□ -0.51
CACNA1A-236ENST00000637117 PHAXQ9H814 394 aaKnown RBP11.87□□□□□ -0.51
CACNA1A-236ENST00000637117 XDHP47989 1333 aa11.86□□□□□ -0.51
CACNA1A-236ENST00000637117 PCCAP05165 728 aaPredicted RBP11.86□□□□□ -0.51
CACNA1A-236ENST00000637117 NF2P35240 595 aa11.86□□□□□ -0.51
CACNA1A-236ENST00000637117 PRSS12P56730 875 aa11.86□□□□□ -0.51
CACNA1A-236ENST00000637117 NOM1Q5C9Z4 860 aaKnown RBP11.86□□□□□ -0.51
CACNA1A-236ENST00000637117 FBXO46Q6PJ61 603 aaPredicted RBP11.86□□□□□ -0.51
CACNA1A-236ENST00000637117 ZNF710Q8N1W2 664 aa11.86□□□□□ -0.51
CACNA1A-236ENST00000637117 PAPPA2Q9BXP8 1791 aa11.86□□□□□ -0.51
CACNA1A-236ENST00000637117 WTIPA6NIX2 430 aaPredicted RBP11.85□□□□□ -0.51
CACNA1A-236ENST00000637117 OGFOD1Q8N543 542 aa11.85□□□□□ -0.51
CACNA1A-236ENST00000637117 CDCA7LQ96GN5 454 aa11.85□□□□□ -0.51
CACNA1A-236ENST00000637117 MXD3Q9BW11 206 aa11.85□□□□□ -0.51
CACNA1A-236ENST00000637117 CWC25Q9NXE8 425 aaPredicted RBP11.85□□□□□ -0.51
CACNA1A-236ENST00000637117 WNT10BO00744 389 aa11.84□□□□□ -0.51
CACNA1A-236ENST00000637117 FKTNO75072 461 aa11.84□□□□□ -0.51
CACNA1A-236ENST00000637117 PTPN12Q05209 780 aaKnown RBP11.84□□□□□ -0.51
CACNA1A-236ENST00000637117 SREBF2Q12772 1141 aa11.84□□□□□ -0.51
CACNA1A-236ENST00000637117 DACT2Q5SW24 774 aa11.84□□□□□ -0.51
CACNA1A-236ENST00000637117 ARMC9Q7Z3E5 817 aa11.84□□□□□ -0.51
CACNA1A-236ENST00000637117 R3HDMLQ9H3Y0 253 aa11.84□□□□□ -0.51
CACNA1A-236ENST00000637117 SCUBE2Q9NQ36 999 aa11.84□□□□□ -0.51
CACNA1A-236ENST00000637117 MBIPQ9NS73 344 aa11.84□□□□□ -0.51
CACNA1A-236ENST00000637117 MINPP1Q9UNW1 487 aa11.84□□□□□ -0.51
CACNA1A-236ENST00000637117 POTEB2H3BUK9 544 aa11.83□□□□□ -0.52
CACNA1A-236ENST00000637117 ELL2O00472 640 aaPredicted RBP11.83□□□□□ -0.52
CACNA1A-236ENST00000637117 PRKG1Q13976 671 aa11.83□□□□□ -0.52
CACNA1A-236ENST00000637117 SKIV2LQ15477 1246 aaKnown RBP11.83□□□□□ -0.52
CACNA1A-236ENST00000637117 PPP4R3BQ5MIZ7 849 aa11.83□□□□□ -0.52
CACNA1A-236ENST00000637117 STRIP1Q5VSL9 837 aa11.83□□□□□ -0.52
CACNA1A-236ENST00000637117 CDC5LQ99459 802 aaKnown RBP11.83□□□□□ -0.52
CACNA1A-236ENST00000637117 METTL22Q9BUU2 404 aaPredicted RBP11.83□□□□□ -0.52
CACNA1A-236ENST00000637117 CFHR5Q9BXR6 569 aa11.83□□□□□ -0.52
CACNA1A-236ENST00000637117 BSDC1Q9NW68 430 aaPredicted RBP11.83□□□□□ -0.52
CACNA1A-236ENST00000637117 LHX6Q9UPM6 363 aa11.83□□□□□ -0.52
CACNA1A-236ENST00000637117 PSME4Q14997 1843 aa11.82□□□□□ -0.52
CACNA1A-236ENST00000637117 ZNF853P0CG23 659 aa11.82□□□□□ -0.52
CACNA1A-236ENST00000637117 MMP14P50281 582 aa11.82□□□□□ -0.52
CACNA1A-236ENST00000637117 CCT4P50991 539 aaKnown RBP11.82□□□□□ -0.52
CACNA1A-236ENST00000637117 WDR43Q15061 677 aaKnown RBP eCLIP11.82□□□□□ -0.52
CACNA1A-236ENST00000637117 SPRYD7Q5W111 196 aa11.82□□□□□ -0.52
CACNA1A-236ENST00000637117 GCC1Q96CN9 775 aa11.82□□□□□ -0.52
CACNA1A-236ENST00000637117 COA1Q9GZY4 146 aa11.82□□□□□ -0.52
CACNA1A-236ENST00000637117 ADAMTS8Q9UP79 889 aa11.82□□□□□ -0.52
CACNA1A-236ENST00000637117 MYO3BQ8WXR4 1341 aa11.82□□□□□ -0.52
CACNA1A-236ENST00000637117 MED23Q9ULK4 1368 aa11.81□□□□□ -0.52
CACNA1A-236ENST00000637117 DDX58O95786 925 aaKnown RBP11.81□□□□□ -0.52
CACNA1A-236ENST00000637117 ALDH1A1P00352 501 aa11.81□□□□□ -0.52
CACNA1A-236ENST00000637117 CTSWP56202 376 aa11.81□□□□□ -0.52
CACNA1A-236ENST00000637117 LDLRAD1Q5T700 205 aa11.81□□□□□ -0.52
CACNA1A-236ENST00000637117 TTLL5Q6EMB2 1281 aa11.81□□□□□ -0.52
CACNA1A-236ENST00000637117 TTLL11Q8NHH1 800 aa11.81□□□□□ -0.52
CACNA1A-236ENST00000637117 ANGEL1Q9UNK9 670 aaKnown RBP11.81□□□□□ -0.52
CACNA1A-236ENST00000637117 SASH1O94885 1247 aa11.8□□□□□ -0.52
CACNA1A-236ENST00000637117 COL9A1P20849 921 aa11.8□□□□□ -0.52
CACNA1A-236ENST00000637117 INHBEP58166 350 aa11.8□□□□□ -0.52
CACNA1A-236ENST00000637117 TXNRD3Q86VQ6 643 aa11.8□□□□□ -0.52
CACNA1A-236ENST00000637117 APOBEC3FQ8IUX4 373 aaKnown RBP11.8□□□□□ -0.52
CACNA1A-236ENST00000637117 SLC10A4Q96EP9 437 aa11.8□□□□□ -0.52
CACNA1A-236ENST00000637117 GREM2Q9H772 168 aa11.8□□□□□ -0.52
CACNA1A-236ENST00000637117 MAP3K2Q9Y2U5 619 aa11.8□□□□□ -0.52
CACNA1A-236ENST00000637117 LEMD3Q9Y2U8 911 aa11.8□□□□□ -0.52
CACNA1A-236ENST00000637117 MYBBP1AQ9BQG0 1328 aaKnown RBP11.8□□□□□ -0.52
CACNA1A-236ENST00000637117 MANSC4A6NHS7 340 aaPredicted RBP11.79□□□□□ -0.52
CACNA1A-236ENST00000637117 CCDC30Q5VVM6 783 aa11.79□□□□□ -0.52
CACNA1A-236ENST00000637117 INTS3Q68E01 1043 aaKnown RBP11.79□□□□□ -0.52
CACNA1A-236ENST00000637117 MAMSTRQ6ZN01 415 aa11.79□□□□□ -0.52
CACNA1A-236ENST00000637117 KIAA0825Q8IV33 1275 aa11.79□□□□□ -0.52
CACNA1A-236ENST00000637117 C8orf58Q8NAV2 365 aa11.79□□□□□ -0.52
CACNA1A-236ENST00000637117 CHMP4AQ9BY43 222 aa11.79□□□□□ -0.52
CACNA1A-236ENST00000637117 IFT57Q9NWB7 429 aa11.79□□□□□ -0.52
CACNA1A-236ENST00000637117 TRIM17Q9Y577 477 aa11.79□□□□□ -0.52
CACNA1A-236ENST00000637117 IGKV5-2P06315 115 aa11.78□□□□□ -0.52
CACNA1A-236ENST00000637117 IGHMBP2P38935 993 aaKnown RBP11.78□□□□□ -0.52
CACNA1A-236ENST00000637117 GNAI1P63096 354 aa11.78□□□□□ -0.52
CACNA1A-236ENST00000637117 GTF2IP78347 998 aa11.78□□□□□ -0.52
CACNA1A-236ENST00000637117 HABP4Q5JVS0 413 aaKnown RBP11.78□□□□□ -0.52
CACNA1A-236ENST00000637117 KSR2Q6VAB6 950 aa11.78□□□□□ -0.52
CACNA1A-236ENST00000637117 OTOP1Q7RTM1 612 aa11.78□□□□□ -0.52
CACNA1A-236ENST00000637117 ZBED3Q96IU2 234 aaPredicted RBP11.78□□□□□ -0.52
CACNA1A-236ENST00000637117 DEFB129Q9H1M3 183 aa11.78□□□□□ -0.52
CACNA1A-236ENST00000637117 POLR3EQ9NVU0 708 aa11.78□□□□□ -0.52
CACNA1A-236ENST00000637117 FAM198AQ9UFP1 575 aa11.78□□□□□ -0.52
CACNA1A-236ENST00000637117 FZD1Q9UP38 647 aa11.78□□□□□ -0.52
CACNA1A-236ENST00000637117 ZNF804BA4D1E1 1349 aa11.78□□□□□ -0.52
CACNA1A-236ENST00000637117 PI4KAP2A4QPH2 592 aa11.77□□□□□ -0.53
CACNA1A-236ENST00000637117 CALD1Q05682 793 aaKnown RBP11.77□□□□□ -0.53
CACNA1A-236ENST00000637117 MAP3K11Q16584 847 aa11.77□□□□□ -0.53
CACNA1A-236ENST00000637117 MYSM1Q5VVJ2 828 aa11.77□□□□□ -0.53
CACNA1A-236ENST00000637117 PI4KAP1Q8N8J0 262 aa11.77□□□□□ -0.53
CACNA1A-236ENST00000637117 ANKRD2Q9GZV1 360 aa11.77□□□□□ -0.53
CACNA1A-236ENST00000637117 PPP1R3GB7ZBB8 358 aa11.76□□□□□ -0.53
CACNA1A-236ENST00000637117 H7C1W4 665 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms