RNA–Protein interactions for RNA: ENST00000637083.1

CLN8-212, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 2,001 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-212ENST00000637083 ANGEL1Q9UNK9 670 aaKnown RBP14.17□□□□□ -0.14
CLN8-212ENST00000637083 NIP7Q9Y221 180 aaKnown RBP eCLIP14.17□□□□□ -0.14
CLN8-212ENST00000637083 ADD1P35611 737 aaKnown RBP14.17□□□□□ -0.14
CLN8-212ENST00000637083 CAMK4Q16566 473 aa14.17□□□□□ -0.14
CLN8-212ENST00000637083 NACAP1Q9BZK3 213 aa14.17□□□□□ -0.14
CLN8-212ENST00000637083 CNNM2Q9H8M5 875 aa14.17□□□□□ -0.14
CLN8-212ENST00000637083 PHLPP1O60346 1717 aa14.17□□□□□ -0.14
CLN8-212ENST00000637083 TCRBV5S4A2TA0A5A2 114 aa14.16□□□□□ -0.14
CLN8-212ENST00000637083 NTSR2O95665 410 aa14.16□□□□□ -0.14
CLN8-212ENST00000637083 ANTXR2P58335 489 aa14.16□□□□□ -0.14
CLN8-212ENST00000637083 STRBPQ96SI9 672 aaKnown RBP14.16□□□□□ -0.14
CLN8-212ENST00000637083 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.16□□□□□ -0.14
CLN8-212ENST00000637083 ORC3Q9UBD5 711 aaPredicted RBP14.16□□□□□ -0.14
CLN8-212ENST00000637083 FAM177BA6PVY3 158 aa14.15□□□□□ -0.14
CLN8-212ENST00000637083 NR1I2O75469 434 aa14.15□□□□□ -0.14
CLN8-212ENST00000637083 TPM2P07951 284 aa14.15□□□□□ -0.14
CLN8-212ENST00000637083 FDPSP14324 419 aaKnown RBP14.15□□□□□ -0.14
CLN8-212ENST00000637083 NAPBQ9H115 298 aa14.15□□□□□ -0.14
CLN8-212ENST00000637083 RTEL1Q9NZ71 1219 aa14.15□□□□□ -0.14
CLN8-212ENST00000637083 MRVI1Q9Y6F6 885 aa14.15□□□□□ -0.14
CLN8-212ENST00000637083 KINO60870 393 aaKnown RBP14.15□□□□□ -0.14
CLN8-212ENST00000637083 PLCB2Q00722 1185 aa14.15□□□□□ -0.14
CLN8-212ENST00000637083 CCAR1Q8IX12 1150 aaKnown RBP14.15□□□□□ -0.14
CLN8-212ENST00000637083 FBXO18Q8NFZ0 1043 aa14.15□□□□□ -0.14
CLN8-212ENST00000637083 HELBQ8NG08 1087 aaPredicted RBP14.15□□□□□ -0.14
CLN8-212ENST00000637083 KCNG4Q8TDN1 519 aa14.15□□□□□ -0.14
CLN8-212ENST00000637083 USP28Q96RU2 1077 aa14.15□□□□□ -0.14
CLN8-212ENST00000637083 KRT23Q9C075 422 aa14.15□□□□□ -0.14
CLN8-212ENST00000637083 GNL3LQ9NVN8 582 aaKnown RBP14.15□□□□□ -0.14
CLN8-212ENST00000637083 WWC3Q9ULE0 1092 aa14.15□□□□□ -0.14
CLN8-212ENST00000637083 MYH15Q9Y2K3 1946 aa14.15□□□□□ -0.14
CLN8-212ENST00000637083 SLIT2O94813 1529 aa14.14□□□□□ -0.15
CLN8-212ENST00000637083 LAMB2P55268 1798 aa14.14□□□□□ -0.15
CLN8-212ENST00000637083 SH2B2O14492 632 aaPredicted RBP14.14□□□□□ -0.15
CLN8-212ENST00000637083 YEATS4O95619 227 aa14.14□□□□□ -0.15
CLN8-212ENST00000637083 METAP2P50579 478 aaKnown RBP eCLIP14.14□□□□□ -0.15
CLN8-212ENST00000637083 CEBPZQ03701 1054 aaKnown RBP14.14□□□□□ -0.15
CLN8-212ENST00000637083 SYNE3Q6ZMZ3 975 aa14.14□□□□□ -0.15
CLN8-212ENST00000637083 CKAP2LQ8IYA6 745 aa14.14□□□□□ -0.15
CLN8-212ENST00000637083 IFNL3Q8IZI9 196 aa14.14□□□□□ -0.15
CLN8-212ENST00000637083 MAGEB6Q8N7X4 407 aa14.14□□□□□ -0.15
CLN8-212ENST00000637083 MTA3Q9BTC8 594 aa14.14□□□□□ -0.15
CLN8-212ENST00000637083 HPS5Q9UPZ3 1129 aa14.14□□□□□ -0.15
CLN8-212ENST00000637083 LIFRP42702 1097 aa14.14□□□□□ -0.15
CLN8-212ENST00000637083 ME1P48163 572 aa14.14□□□□□ -0.15
CLN8-212ENST00000637083 FOSBP53539 338 aa14.14□□□□□ -0.15
CLN8-212ENST00000637083 FAM160A1Q05DH4 1040 aa14.14□□□□□ -0.15
CLN8-212ENST00000637083 RASGRF1Q13972 1273 aa14.14□□□□□ -0.15
CLN8-212ENST00000637083 SF3A1Q15459 793 aaKnown RBP14.14□□□□□ -0.15
CLN8-212ENST00000637083 FAM98CQ17RN3 349 aaKnown RBP14.14□□□□□ -0.15
CLN8-212ENST00000637083 SEC31BQ9NQW1 1179 aa14.14□□□□□ -0.15
CLN8-212ENST00000637083 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.14□□□□□ -0.15
CLN8-212ENST00000637083 PNPLA7Q6ZV29 1317 aa14.13□□□□□ -0.15
CLN8-212ENST00000637083 ZNF831Q5JPB2 1677 aa14.13□□□□□ -0.15
CLN8-212ENST00000637083 A0A1W2PQ27 194 aa14.13□□□□□ -0.15
CLN8-212ENST00000637083 A0A1W2PQ64 194 aa14.13□□□□□ -0.15
CLN8-212ENST00000637083 A0A1W2PQD8 194 aa14.13□□□□□ -0.15
CLN8-212ENST00000637083 ANO6Q4KMQ2 910 aa14.13□□□□□ -0.15
CLN8-212ENST00000637083 ADALQ6DHV7 355 aa14.13□□□□□ -0.15
CLN8-212ENST00000637083 SGMS1Q86VZ5 419 aa14.13□□□□□ -0.15
CLN8-212ENST00000637083 TBC1D10CQ8IV04 446 aa14.13□□□□□ -0.15
CLN8-212ENST00000637083 DDX60Q8IY21 1712 aaKnown RBP14.13□□□□□ -0.15
CLN8-212ENST00000637083 POLR3EQ9NVU0 708 aa14.13□□□□□ -0.15
CLN8-212ENST00000637083 MBD4O95243 580 aa14.12□□□□□ -0.15
CLN8-212ENST00000637083 GUCY1B3Q02153 619 aa14.12□□□□□ -0.15
CLN8-212ENST00000637083 SART3Q15020 963 aaKnown RBP14.12□□□□□ -0.15
CLN8-212ENST00000637083 STK38Q15208 465 aa14.12□□□□□ -0.15
CLN8-212ENST00000637083 RNF41Q9H4P4 317 aaPredicted RBP14.12□□□□□ -0.15
CLN8-212ENST00000637083 GPHNQ9NQX3 736 aaPredicted RBP14.12□□□□□ -0.15
CLN8-212ENST00000637083 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.12□□□□□ -0.15
CLN8-212ENST00000637083 DOCK2Q92608 1830 aa14.12□□□□□ -0.15
CLN8-212ENST00000637083 ZBTB43O43298 467 aa14.12□□□□□ -0.15
CLN8-212ENST00000637083 CHRNDQ07001 517 aa14.12□□□□□ -0.15
CLN8-212ENST00000637083 SF3B3Q15393 1217 aaKnown RBP14.12□□□□□ -0.15
CLN8-212ENST00000637083 NFXL1Q6ZNB6 911 aa14.12□□□□□ -0.15
CLN8-212ENST00000637083 ANKRD18AQ8IVF6 992 aa14.12□□□□□ -0.15
CLN8-212ENST00000637083 TMTC2Q8N394 836 aa14.12□□□□□ -0.15
CLN8-212ENST00000637083 TDRD7Q8NHU6 1098 aaKnown RBP14.12□□□□□ -0.15
CLN8-212ENST00000637083 MRPS27Q92552 414 aaKnown RBP14.12□□□□□ -0.15
CLN8-212ENST00000637083 WASF1Q92558 559 aa14.12□□□□□ -0.15
CLN8-212ENST00000637083 NGLY1Q96IV0 654 aa14.12□□□□□ -0.15
CLN8-212ENST00000637083 NBPF3Q9H094 633 aa14.12□□□□□ -0.15
CLN8-212ENST00000637083 LRP2BPQ9P2M1 347 aa14.12□□□□□ -0.15
CLN8-212ENST00000637083 B4E1Z4 1266 aa14.11□□□□□ -0.15
CLN8-212ENST00000637083 ZNF165P49910 485 aa14.11□□□□□ -0.15
CLN8-212ENST00000637083 TRIM29Q14134 588 aa14.11□□□□□ -0.15
CLN8-212ENST00000637083 UBE4AQ14139 1066 aa14.11□□□□□ -0.15
CLN8-212ENST00000637083 STX1AQ16623 288 aa14.11□□□□□ -0.15
CLN8-212ENST00000637083 AKNAD1Q5T1N1 836 aa14.11□□□□□ -0.15
CLN8-212ENST00000637083 MFSD6Q6ZSS7 791 aa14.11□□□□□ -0.15
CLN8-212ENST00000637083 CYB5R4Q7L1T6 521 aa14.11□□□□□ -0.15
CLN8-212ENST00000637083 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.11□□□□□ -0.15
CLN8-212ENST00000637083 CBX8Q9HC52 389 aa14.11□□□□□ -0.15
CLN8-212ENST00000637083 ERICH2A1L162 156 aa14.1□□□□□ -0.15
CLN8-212ENST00000637083 CCDC69A6NI79 296 aa14.1□□□□□ -0.15
CLN8-212ENST00000637083 GOLGA6L19H0YKK7 550 aa14.1□□□□□ -0.15
CLN8-212ENST00000637083 SNAP23O00161 211 aa14.1□□□□□ -0.15
CLN8-212ENST00000637083 TDO2P48775 406 aa14.1□□□□□ -0.15
CLN8-212ENST00000637083 VPS72Q15906 364 aa14.1□□□□□ -0.15
CLN8-212ENST00000637083 TMEM67Q5HYA8 995 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms