RNA–Protein interactions for RNA: ENST00000636780.1

CLN5-216, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 5

Gene CLN5, Length 2,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-216ENST00000636780 CDC27P30260 824 aa22.13■■□□□ 1.13
CLN5-216ENST00000636780 PUM3Q15397 648 aaKnown RBP22.13■■□□□ 1.13
CLN5-216ENST00000636780 UTP14AQ9BVJ6 771 aaKnown RBP22.13■■□□□ 1.13
CLN5-216ENST00000636780 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.13■■□□□ 1.13
CLN5-216ENST00000636780 COL4A1P02462 1669 aa22.12■■□□□ 1.13
CLN5-216ENST00000636780 LLPHQ9BRT6 129 aaKnown RBP22.12■■□□□ 1.13
CLN5-216ENST00000636780 NHSL1Q5SYE7 1610 aa22.12■■□□□ 1.13
CLN5-216ENST00000636780 TCRBV5S4A2TA0A5A2 114 aa22.12■■□□□ 1.13
CLN5-216ENST00000636780 CPLX1O14810 134 aa22.12■■□□□ 1.13
CLN5-216ENST00000636780 FGFR2P21802 821 aa22.12■■□□□ 1.13
CLN5-216ENST00000636780 LPIN2Q92539 896 aa22.12■■□□□ 1.13
CLN5-216ENST00000636780 CLSTN2Q9H4D0 955 aa22.12■■□□□ 1.13
CLN5-216ENST00000636780 JAG2Q9Y219 1238 aa22.12■■□□□ 1.13
CLN5-216ENST00000636780 GYG1P46976 350 aa22.11■■□□□ 1.13
CLN5-216ENST00000636780 HS1BP3Q53T59 392 aa22.11■■□□□ 1.13
CLN5-216ENST00000636780 STRBPQ96SI9 672 aaKnown RBP22.11■■□□□ 1.13
CLN5-216ENST00000636780 ZSCAN16Q9H4T2 348 aaPredicted RBP22.11■■□□□ 1.13
CLN5-216ENST00000636780 ABCF2Q9UG63 623 aa22.11■■□□□ 1.13
CLN5-216ENST00000636780 FBXO3Q9UK99 471 aa22.11■■□□□ 1.13
CLN5-216ENST00000636780 ERVV-1B6SEH8 477 aa22.11■■□□□ 1.13
CLN5-216ENST00000636780 C8orf76Q96K31 380 aa22.11■■□□□ 1.13
CLN5-216ENST00000636780 C11orf57Q6ZUT1 292 aaPredicted RBP22.1■■□□□ 1.13
CLN5-216ENST00000636780 ADGRA1Q86SQ6 560 aa22.1■■□□□ 1.13
CLN5-216ENST00000636780 LCORLQ8N3X6 602 aa22.1■■□□□ 1.13
CLN5-216ENST00000636780 CFAP45Q9UL16 551 aa22.1■■□□□ 1.13
CLN5-216ENST00000636780 ZNF500O60304 480 aaPredicted RBP22.1■■□□□ 1.13
CLN5-216ENST00000636780 HMGN5P82970 282 aaKnown RBP22.1■■□□□ 1.13
CLN5-216ENST00000636780 RBM10P98175 930 aaKnown RBP22.1■■□□□ 1.13
CLN5-216ENST00000636780 EVX2Q03828 476 aa22.1■■□□□ 1.13
CLN5-216ENST00000636780 UVSSAQ2YD98 709 aa22.1■■□□□ 1.13
CLN5-216ENST00000636780 ISM2Q6H9L7 571 aa22.1■■□□□ 1.13
CLN5-216ENST00000636780 AKAP11Q9UKA4 1901 aa22.1■■□□□ 1.13
CLN5-216ENST00000636780 LRP6O75581 1613 aa22.09■■□□□ 1.13
CLN5-216ENST00000636780 NUP98P52948 1817 aa22.09■■□□□ 1.13
CLN5-216ENST00000636780 ERFEQ4G0M1 354 aa22.09■■□□□ 1.13
CLN5-216ENST00000636780 NAA16Q6N069 864 aaPredicted RBP22.09■■□□□ 1.13
CLN5-216ENST00000636780 PCDHA7Q9UN72 937 aa22.09■■□□□ 1.13
CLN5-216ENST00000636780 MARCKSP29966 332 aaPredicted RBP22.09■■□□□ 1.13
CLN5-216ENST00000636780 CHRNDQ07001 517 aa22.09■■□□□ 1.13
CLN5-216ENST00000636780 SNW1Q13573 536 aaKnown RBP22.09■■□□□ 1.13
CLN5-216ENST00000636780 FSIP1Q8NA03 581 aa22.09■■□□□ 1.13
CLN5-216ENST00000636780 SDR42E1Q8WUS8 393 aa22.09■■□□□ 1.13
CLN5-216ENST00000636780 KCNF1Q9H3M0 494 aa22.09■■□□□ 1.13
CLN5-216ENST00000636780 RCOR1Q9UKL0 485 aa22.09■■□□□ 1.13
CLN5-216ENST00000636780 PYCARDQ9ULZ3 195 aa22.09■■□□□ 1.13
CLN5-216ENST00000636780 ROBO1Q9Y6N7 1651 aa22.08■■□□□ 1.13
CLN5-216ENST00000636780 TRDNQ13061 729 aa22.08■■□□□ 1.13
CLN5-216ENST00000636780 FAM200AQ8TCP9 573 aa22.08■■□□□ 1.13
CLN5-216ENST00000636780 TSC1Q92574 1164 aa22.08■■□□□ 1.13
CLN5-216ENST00000636780 ZSWIM5Q9P217 1185 aa22.08■■□□□ 1.13
CLN5-216ENST00000636780 ARID4AP29374 1257 aaPredicted RBP22.08■■□□□ 1.12
CLN5-216ENST00000636780 SLC4A8Q2Y0W8 1093 aa22.08■■□□□ 1.12
CLN5-216ENST00000636780 LRRFIP1Q32MZ4 808 aaKnown RBP22.08■■□□□ 1.12
CLN5-216ENST00000636780 SASS6Q6UVJ0 657 aa22.08■■□□□ 1.12
CLN5-216ENST00000636780 NFXL1Q6ZNB6 911 aa22.08■■□□□ 1.12
CLN5-216ENST00000636780 CHMP4CQ96CF2 233 aa22.08■■□□□ 1.12
CLN5-216ENST00000636780 NTSR2O95665 410 aa22.07■■□□□ 1.12
CLN5-216ENST00000636780 ZNF165P49910 485 aa22.07■■□□□ 1.12
CLN5-216ENST00000636780 IFNL3Q8IZI9 196 aa22.07■■□□□ 1.12
CLN5-216ENST00000636780 CYP2D7A0A087X1C5 515 aa22.07■■□□□ 1.12
CLN5-216ENST00000636780 SLC5A1P13866 664 aa22.07■■□□□ 1.12
CLN5-216ENST00000636780 KLRK1P26718 216 aa22.07■■□□□ 1.12
CLN5-216ENST00000636780 DNTTIP2Q5QJE6 756 aaKnown RBP22.07■■□□□ 1.12
CLN5-216ENST00000636780 PTGS1P23219 599 aa22.06■■□□□ 1.12
CLN5-216ENST00000636780 LRMPQ12912 555 aa22.06■■□□□ 1.12
CLN5-216ENST00000636780 AMIGO3Q86WK7 504 aa22.06■■□□□ 1.12
CLN5-216ENST00000636780 LINC00116Q8NCU8 138 aa22.06■■□□□ 1.12
CLN5-216ENST00000636780 SRP68Q9UHB9 627 aaKnown RBP22.06■■□□□ 1.12
CLN5-216ENST00000636780 DDX19AQ9NUU7 478 aaKnown RBP22.06■■□□□ 1.12
CLN5-216ENST00000636780 LRP2BPQ9P2M1 347 aa22.06■■□□□ 1.12
CLN5-216ENST00000636780 COL16A1Q07092 1604 aaPredicted RBP22.06■■□□□ 1.12
CLN5-216ENST00000636780 BIN1O00499 593 aa22.05■■□□□ 1.12
CLN5-216ENST00000636780 NDUFA8P51970 172 aa22.05■■□□□ 1.12
CLN5-216ENST00000636780 FBXO18Q8NFZ0 1043 aa22.05■■□□□ 1.12
CLN5-216ENST00000636780 NAPBQ9H115 298 aa22.05■■□□□ 1.12
CLN5-216ENST00000636780 MYH14Q7Z406 1995 aaKnown RBP22.05■■□□□ 1.12
CLN5-216ENST00000636780 GSG1L2A8MUP6 293 aa22.05■■□□□ 1.12
CLN5-216ENST00000636780 METAP2P50579 478 aaKnown RBP eCLIP22.05■■□□□ 1.12
CLN5-216ENST00000636780 UBE3CQ15386 1083 aa22.05■■□□□ 1.12
CLN5-216ENST00000636780 C8orf37Q96NL8 207 aa22.05■■□□□ 1.12
CLN5-216ENST00000636780 ANGEL1Q9UNK9 670 aaKnown RBP22.05■■□□□ 1.12
CLN5-216ENST00000636780 TAF1P21675 1872 aa22.05■■□□□ 1.12
CLN5-216ENST00000636780 GUCY1A2P33402 732 aa22.04■■□□□ 1.12
CLN5-216ENST00000636780 TTF1Q15361 905 aaPredicted RBP22.04■■□□□ 1.12
CLN5-216ENST00000636780 DRC7Q8IY82 874 aa22.04■■□□□ 1.12
CLN5-216ENST00000636780 ARID3AQ99856 593 aa22.04■■□□□ 1.12
CLN5-216ENST00000636780 BCL11BQ9C0K0 894 aaPredicted RBP22.04■■□□□ 1.12
CLN5-216ENST00000636780 SLC4A4Q9Y6R1 1079 aa22.04■■□□□ 1.12
CLN5-216ENST00000636780 MROH5Q6ZUA9 1318 aa22.04■■□□□ 1.12
CLN5-216ENST00000636780 MINDY4BA8MYZ0 360 aa22.04■■□□□ 1.12
CLN5-216ENST00000636780 EVCP57679 992 aa22.04■■□□□ 1.12
CLN5-216ENST00000636780 SF3A1Q15459 793 aaKnown RBP22.04■■□□□ 1.12
CLN5-216ENST00000636780 TMEM67Q5HYA8 995 aa22.04■■□□□ 1.12
CLN5-216ENST00000636780 APOA5Q6Q788 366 aa22.04■■□□□ 1.12
CLN5-216ENST00000636780 DOT1LQ8TEK3 1739 aa22.04■■□□□ 1.12
CLN5-216ENST00000636780 TRIM5Q9C035 493 aa22.04■■□□□ 1.12
CLN5-216ENST00000636780 hCG_1642624A0A1W2PR95 340 aa22.03■■□□□ 1.12
CLN5-216ENST00000636780 RANBP6O60518 1105 aaKnown RBP22.03■■□□□ 1.12
CLN5-216ENST00000636780 IGHMBP2P38935 993 aaKnown RBP22.03■■□□□ 1.12
CLN5-216ENST00000636780 IGDCC4Q8TDY8 1250 aa22.03■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms