RNA–Protein interactions for RNA: ENST00000636640.1

SYNGAP1-216, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 118 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-216ENST00000636640 RRP1BQ14684 758 aaKnown RBP2.05□□□□□ -2.08
SYNGAP1-216ENST00000636640 SHROOM1Q2M3G4 852 aaPredicted RBP2.05□□□□□ -2.08
SYNGAP1-216ENST00000636640 CFAP100Q494V2 611 aa2.05□□□□□ -2.08
SYNGAP1-216ENST00000636640 DCAF8Q5TAQ9 597 aa2.05□□□□□ -2.08
SYNGAP1-216ENST00000636640 STRIP1Q5VSL9 837 aa2.05□□□□□ -2.08
SYNGAP1-216ENST00000636640 SPRYD7Q5W111 196 aa2.05□□□□□ -2.08
SYNGAP1-216ENST00000636640 PPP1R3FQ6ZSY5 799 aaPredicted RBP2.05□□□□□ -2.08
SYNGAP1-216ENST00000636640 C15orf52Q6ZUT6 534 aaKnown RBP2.05□□□□□ -2.08
SYNGAP1-216ENST00000636640 ATG9AQ7Z3C6 839 aa2.05□□□□□ -2.08
SYNGAP1-216ENST00000636640 PODNQ7Z5L7 613 aa2.05□□□□□ -2.08
SYNGAP1-216ENST00000636640 FBXO33Q7Z6M2 555 aa2.05□□□□□ -2.08
SYNGAP1-216ENST00000636640 CCDC84Q86UT8 332 aaPredicted RBP2.05□□□□□ -2.08
SYNGAP1-216ENST00000636640 WDR63Q8IWG1 891 aa2.05□□□□□ -2.08
SYNGAP1-216ENST00000636640 SULF1Q8IWU6 871 aa2.05□□□□□ -2.08
SYNGAP1-216ENST00000636640 TRMT2AQ8IZ69 625 aaKnown RBP2.05□□□□□ -2.08
SYNGAP1-216ENST00000636640 TDRD7Q8NHU6 1098 aaKnown RBP2.05□□□□□ -2.08
SYNGAP1-216ENST00000636640 CD99L2Q8TCZ2 262 aa2.05□□□□□ -2.08
SYNGAP1-216ENST00000636640 ZNF384Q8TF68 577 aa2.05□□□□□ -2.08
SYNGAP1-216ENST00000636640 ZKSCAN4Q969J2 545 aaPredicted RBP2.05□□□□□ -2.08
SYNGAP1-216ENST00000636640 WNK4Q96J92 1243 aa2.05□□□□□ -2.08
SYNGAP1-216ENST00000636640 MS4A4AQ96JQ5 239 aa2.05□□□□□ -2.08
SYNGAP1-216ENST00000636640 CDC5LQ99459 802 aaKnown RBP2.05□□□□□ -2.08
SYNGAP1-216ENST00000636640 MPHOSPH8Q99549 860 aa2.05□□□□□ -2.08
SYNGAP1-216ENST00000636640 STK31Q9BXU1 1019 aa2.05□□□□□ -2.08
SYNGAP1-216ENST00000636640 ARHGAP39Q9C0H5 1083 aa2.05□□□□□ -2.08
SYNGAP1-216ENST00000636640 TMEM39BQ9GZU3 492 aa2.05□□□□□ -2.08
SYNGAP1-216ENST00000636640 COA1Q9GZY4 146 aa2.05□□□□□ -2.08
SYNGAP1-216ENST00000636640 USP44Q9H0E7 712 aa2.05□□□□□ -2.08
SYNGAP1-216ENST00000636640 SIL1Q9H173 461 aa2.05□□□□□ -2.08
SYNGAP1-216ENST00000636640 TMX4Q9H1E5 349 aaPredicted RBP2.05□□□□□ -2.08
SYNGAP1-216ENST00000636640 DEFB129Q9H1M3 183 aa2.05□□□□□ -2.08
SYNGAP1-216ENST00000636640 ELP3Q9H9T3 547 aa2.05□□□□□ -2.08
SYNGAP1-216ENST00000636640 VEZTQ9HBM0 779 aa2.05□□□□□ -2.08
SYNGAP1-216ENST00000636640 ZNF70Q9UC06 446 aaPredicted RBP2.05□□□□□ -2.08
SYNGAP1-216ENST00000636640 HPS5Q9UPZ3 1129 aa2.05□□□□□ -2.08
SYNGAP1-216ENST00000636640 LEMD3Q9Y2U8 911 aa2.05□□□□□ -2.08
SYNGAP1-216ENST00000636640 UTYO14607 1347 aa2.05□□□□□ -2.08
SYNGAP1-216ENST00000636640 FAM205AQ6ZU69 1335 aa2.05□□□□□ -2.08
SYNGAP1-216ENST00000636640 PITPNM2Q9BZ72 1349 aa2.05□□□□□ -2.08
SYNGAP1-216ENST00000636640 NLRC5Q86WI3 1866 aa2.05□□□□□ -2.08
SYNGAP1-216ENST00000636640 MYH9P35579 1960 aaKnown RBP2.05□□□□□ -2.08
SYNGAP1-216ENST00000636640 TET1Q8NFU7 2136 aa2.05□□□□□ -2.08
SYNGAP1-216ENST00000636640 SPDYE2BA6NHP3 402 aa2.04□□□□□ -2.08
SYNGAP1-216ENST00000636640 FAM196BA6NMK8 535 aa2.04□□□□□ -2.08
SYNGAP1-216ENST00000636640 GPR25O00155 361 aa2.04□□□□□ -2.08
SYNGAP1-216ENST00000636640 ANP32CO43423 234 aa2.04□□□□□ -2.08
SYNGAP1-216ENST00000636640 BCAR3O75815 825 aa2.04□□□□□ -2.08
SYNGAP1-216ENST00000636640 ALDH1L1O75891 902 aa2.04□□□□□ -2.08
SYNGAP1-216ENST00000636640 SLC34A2O95436 690 aa2.04□□□□□ -2.08
SYNGAP1-216ENST00000636640 MYCP01106 439 aaPredicted RBP2.04□□□□□ -2.08
SYNGAP1-216ENST00000636640 SPDYE6P0CI01 402 aa2.04□□□□□ -2.08
SYNGAP1-216ENST00000636640 COL6A3P12111 3177 aa2.04□□□□□ -2.08
SYNGAP1-216ENST00000636640 SIP14410 1827 aa2.04□□□□□ -2.08
SYNGAP1-216ENST00000636640 EN2P19622 333 aaPredicted RBP2.04□□□□□ -2.08
SYNGAP1-216ENST00000636640 HIBADHP31937 336 aaKnown RBP2.04□□□□□ -2.08
SYNGAP1-216ENST00000636640 INPP5BP32019 993 aa2.04□□□□□ -2.08
SYNGAP1-216ENST00000636640 IGHMBP2P38935 993 aaKnown RBP2.04□□□□□ -2.08
SYNGAP1-216ENST00000636640 PHKA1P46020 1223 aa2.04□□□□□ -2.08
SYNGAP1-216ENST00000636640 CRKP46108 304 aa2.04□□□□□ -2.08
SYNGAP1-216ENST00000636640 KCNJ4P48050 445 aa2.04□□□□□ -2.08
SYNGAP1-216ENST00000636640 RBM5P52756 815 aaKnown RBP eCLIP2.04□□□□□ -2.08
SYNGAP1-216ENST00000636640 TIMM10P62072 90 aa2.04□□□□□ -2.08
SYNGAP1-216ENST00000636640 JAG1P78504 1218 aa2.04□□□□□ -2.08
SYNGAP1-216ENST00000636640 EVX2Q03828 476 aa2.04□□□□□ -2.08
SYNGAP1-216ENST00000636640 NFIAQ12857 509 aa2.04□□□□□ -2.08
SYNGAP1-216ENST00000636640 CRHR2Q13324 411 aa2.04□□□□□ -2.08
SYNGAP1-216ENST00000636640 IFIT5Q13325 482 aaKnown RBP2.04□□□□□ -2.08
SYNGAP1-216ENST00000636640 MOGSQ13724 837 aa2.04□□□□□ -2.08
SYNGAP1-216ENST00000636640 RASA3Q14644 834 aa2.04□□□□□ -2.08
SYNGAP1-216ENST00000636640 DLGAP5Q15398 846 aa2.04□□□□□ -2.08
SYNGAP1-216ENST00000636640 DIXDC1Q155Q3 683 aa2.04□□□□□ -2.08
SYNGAP1-216ENST00000636640 RABL6Q3YEC7 729 aaPredicted RBP2.04□□□□□ -2.08
SYNGAP1-216ENST00000636640 SPDYE2Q495Y8 402 aa2.04□□□□□ -2.08
SYNGAP1-216ENST00000636640 APOBEC3HQ6NTF7 200 aaKnown RBP2.04□□□□□ -2.08
SYNGAP1-216ENST00000636640 PI16Q6UXB8 463 aa2.04□□□□□ -2.08
SYNGAP1-216ENST00000636640 LDHAL6AQ6ZMR3 332 aa2.04□□□□□ -2.08
SYNGAP1-216ENST00000636640 MIGA2Q7L4E1 593 aa2.04□□□□□ -2.08
SYNGAP1-216ENST00000636640 SH3BP5LQ7L8J4 393 aa2.04□□□□□ -2.08
SYNGAP1-216ENST00000636640 OTOP1Q7RTM1 612 aa2.04□□□□□ -2.08
SYNGAP1-216ENST00000636640 CTU1Q7Z7A3 348 aaKnown RBP2.04□□□□□ -2.08
SYNGAP1-216ENST00000636640 IFNL1Q8IU54 200 aa2.04□□□□□ -2.08
SYNGAP1-216ENST00000636640 DZIP1LQ8IYY4 767 aaKnown RBP2.04□□□□□ -2.08
SYNGAP1-216ENST00000636640 FAM43AQ8N2R8 423 aa2.04□□□□□ -2.08
SYNGAP1-216ENST00000636640 MTMR14Q8NCE2 650 aa2.04□□□□□ -2.08
SYNGAP1-216ENST00000636640 BRI3BPQ8WY22 251 aa2.04□□□□□ -2.08
SYNGAP1-216ENST00000636640 EVPLQ92817 2033 aa2.04□□□□□ -2.08
SYNGAP1-216ENST00000636640 CCDC102AQ96A19 550 aa2.04□□□□□ -2.08
SYNGAP1-216ENST00000636640 SLC10A4Q96EP9 437 aa2.04□□□□□ -2.08
SYNGAP1-216ENST00000636640 MEIS3Q99687 375 aa2.04□□□□□ -2.08
SYNGAP1-216ENST00000636640 BEGAINQ9BUH8 593 aa2.04□□□□□ -2.08
SYNGAP1-216ENST00000636640 KIAA1671Q9BY89 1806 aa2.04□□□□□ -2.08
SYNGAP1-216ENST00000636640 SRCIN1Q9C0H9 1055 aa2.04□□□□□ -2.08
SYNGAP1-216ENST00000636640 ANKRD2Q9GZV1 360 aa2.04□□□□□ -2.08
SYNGAP1-216ENST00000636640 MYH16Q9H6N6 1097 aa2.04□□□□□ -2.08
SYNGAP1-216ENST00000636640 DDX4Q9NQI0 724 aaKnown RBP2.04□□□□□ -2.08
SYNGAP1-216ENST00000636640 CNNM1Q9NRU3 951 aa2.04□□□□□ -2.08
SYNGAP1-216ENST00000636640 C9orf78Q9NZ63 289 aaPredicted RBP2.04□□□□□ -2.08
SYNGAP1-216ENST00000636640 FAM198AQ9UFP1 575 aa2.04□□□□□ -2.08
SYNGAP1-216ENST00000636640 TTF2Q9UNY4 1162 aaKnown RBP2.04□□□□□ -2.08
SYNGAP1-216ENST00000636640 SNCAIPQ9Y6H5 919 aa2.04□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms