RNA–Protein interactions for RNA: ENST00000636610.1

CACNA1A-228, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,011 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-228ENST00000636610 CTDSPL2Q05D32 466 aa16.29■□□□□ 0.2
CACNA1A-228ENST00000636610 PRDM4Q9UKN5 801 aa16.29■□□□□ 0.2
CACNA1A-228ENST00000636610 WWC3Q9ULE0 1092 aa16.29■□□□□ 0.2
CACNA1A-228ENST00000636610 ZSCAN20P17040 1043 aaPredicted RBP16.29■□□□□ 0.2
CACNA1A-228ENST00000636610 CDC27P30260 824 aa16.29■□□□□ 0.2
CACNA1A-228ENST00000636610 PHKA1P46020 1223 aa16.29■□□□□ 0.2
CACNA1A-228ENST00000636610 TCIRG1Q13488 830 aa16.29■□□□□ 0.2
CACNA1A-228ENST00000636610 MB21D2Q8IYB1 491 aaPredicted RBP16.29■□□□□ 0.2
CACNA1A-228ENST00000636610 PIH1D3Q9NQM4 214 aaKnown RBP16.29■□□□□ 0.2
CACNA1A-228ENST00000636610 RTEL1Q9NZ71 1219 aa16.29■□□□□ 0.2
CACNA1A-228ENST00000636610 CTNNA3Q9UI47 895 aa16.29■□□□□ 0.2
CACNA1A-228ENST00000636610 ANO1Q5XXA6 986 aa16.29■□□□□ 0.2
CACNA1A-228ENST00000636610 LRRN4CLQ8ND94 238 aa16.29■□□□□ 0.2
CACNA1A-228ENST00000636610 APPBP2Q92624 585 aa16.29■□□□□ 0.2
CACNA1A-228ENST00000636610 MRFAP1L1Q96HT8 127 aa16.29■□□□□ 0.2
CACNA1A-228ENST00000636610 NAT10Q9H0A0 1025 aaKnown RBP16.29■□□□□ 0.2
CACNA1A-228ENST00000636610 TMOD3Q9NYL9 352 aa16.29■□□□□ 0.2
CACNA1A-228ENST00000636610 USP54Q70EL1 1684 aa16.28■□□□□ 0.2
CACNA1A-228ENST00000636610 FOXN1O15353 648 aa16.28■□□□□ 0.2
CACNA1A-228ENST00000636610 METAP2P50579 478 aaKnown RBP eCLIP16.28■□□□□ 0.2
CACNA1A-228ENST00000636610 NBPF3Q9H094 633 aa16.28■□□□□ 0.2
CACNA1A-228ENST00000636610 CTIFO43310 598 aaKnown RBP16.28■□□□□ 0.2
CACNA1A-228ENST00000636610 ELF2Q15723 593 aa16.28■□□□□ 0.2
CACNA1A-228ENST00000636610 VPS37DQ86XT2 251 aa16.28■□□□□ 0.2
CACNA1A-228ENST00000636610 KIF23Q02241 960 aaPredicted RBP16.27■□□□□ 0.2
CACNA1A-228ENST00000636610 KIF6Q6ZMV9 814 aa16.27■□□□□ 0.2
CACNA1A-228ENST00000636610 PDILTQ8N807 584 aa16.27■□□□□ 0.2
CACNA1A-228ENST00000636610 ANKRD7Q92527 254 aa16.27■□□□□ 0.2
CACNA1A-228ENST00000636610 TRMT112Q9UI30 125 aaKnown RBP16.27■□□□□ 0.2
CACNA1A-228ENST00000636610 PCDH11XQ9BZA7 1347 aa16.27■□□□□ 0.2
CACNA1A-228ENST00000636610 PCDH11YQ9BZA8 1340 aa16.27■□□□□ 0.2
CACNA1A-228ENST00000636610 ZNF532Q9HCE3 1301 aa16.27■□□□□ 0.2
CACNA1A-228ENST00000636610 MRC1P22897 1456 aa16.27■□□□□ 0.2
CACNA1A-228ENST00000636610 SYT10Q6XYQ8 523 aa16.27■□□□□ 0.2
CACNA1A-228ENST00000636610 DPF2Q92785 391 aa16.27■□□□□ 0.2
CACNA1A-228ENST00000636610 AKAP2Q9Y2D5 859 aa16.27■□□□□ 0.2
CACNA1A-228ENST00000636610 hCG_1642624A0A1W2PR95 340 aa16.27■□□□□ 0.19
CACNA1A-228ENST00000636610 KRT40Q6A162 431 aa16.27■□□□□ 0.19
CACNA1A-228ENST00000636610 ARMCX5Q6P1M9 558 aa16.27■□□□□ 0.19
CACNA1A-228ENST00000636610 HOMER1Q86YM7 354 aa16.27■□□□□ 0.19
CACNA1A-228ENST00000636610 CCAR2Q8N163 923 aaKnown RBP16.27■□□□□ 0.19
CACNA1A-228ENST00000636610 SLC26A6Q9BXS9 759 aa16.27■□□□□ 0.19
CACNA1A-228ENST00000636610 KCNJ14Q9UNX9 436 aa16.27■□□□□ 0.19
CACNA1A-228ENST00000636610 SIPA1L3O60292 1781 aaPredicted RBP16.26■□□□□ 0.19
CACNA1A-228ENST00000636610 DHX16O60231 1041 aaKnown RBP16.26■□□□□ 0.19
CACNA1A-228ENST00000636610 IL2RBP14784 551 aa16.26■□□□□ 0.19
CACNA1A-228ENST00000636610 SYKP43405 635 aa16.26■□□□□ 0.19
CACNA1A-228ENST00000636610 ZNF827Q17R98 1081 aa16.26■□□□□ 0.19
CACNA1A-228ENST00000636610 GPR108Q9NPR9 543 aa16.26■□□□□ 0.19
CACNA1A-228ENST00000636610 SERPINC1P01008 464 aa16.26■□□□□ 0.19
CACNA1A-228ENST00000636610 SARM1Q6SZW1 724 aa16.26■□□□□ 0.19
CACNA1A-228ENST00000636610 SMAP1Q8IYB5 467 aaPredicted RBP16.26■□□□□ 0.19
CACNA1A-228ENST00000636610 KCNG4Q8TDN1 519 aa16.26■□□□□ 0.19
CACNA1A-228ENST00000636610 SMIM22K7EJ46 135 aa16.25■□□□□ 0.19
CACNA1A-228ENST00000636610 PRKAB2O43741 272 aa16.25■□□□□ 0.19
CACNA1A-228ENST00000636610 AXDND1Q5T1B0 1012 aaPredicted RBP16.25■□□□□ 0.19
CACNA1A-228ENST00000636610 MIGA1Q8NAN2 632 aa16.25■□□□□ 0.19
CACNA1A-228ENST00000636610 NEDD4P46934 1319 aa16.25■□□□□ 0.19
CACNA1A-228ENST00000636610 SFPQP23246 707 aaKnown RBP eCLIP16.25■□□□□ 0.19
CACNA1A-228ENST00000636610 GUCY1A2P33402 732 aa16.25■□□□□ 0.19
CACNA1A-228ENST00000636610 CFAP100Q494V2 611 aa16.25■□□□□ 0.19
CACNA1A-228ENST00000636610 GRAMD1CQ8IYS0 662 aa16.25■□□□□ 0.19
CACNA1A-228ENST00000636610 PIGBQ92521 554 aa16.25■□□□□ 0.19
CACNA1A-228ENST00000636610 SPATA31A3Q5VYP0 1347 aa16.25■□□□□ 0.19
CACNA1A-228ENST00000636610 SCN11AQ9UI33 1791 aa16.25■□□□□ 0.19
CACNA1A-228ENST00000636610 GRIN1Q05586 938 aa16.24■□□□□ 0.19
CACNA1A-228ENST00000636610 AIDAQ96BJ3 306 aa16.24■□□□□ 0.19
CACNA1A-228ENST00000636610 ISCA1Q9BUE6 129 aa16.24■□□□□ 0.19
CACNA1A-228ENST00000636610 ARMT1Q9H993 441 aa16.24■□□□□ 0.19
CACNA1A-228ENST00000636610 TMEM232C9JQI7 657 aa16.24■□□□□ 0.19
CACNA1A-228ENST00000636610 CAVIN2O95810 425 aa16.24■□□□□ 0.19
CACNA1A-228ENST00000636610 TMEM67Q5HYA8 995 aa16.24■□□□□ 0.19
CACNA1A-228ENST00000636610 E4F1Q66K89 784 aaPredicted RBP16.24■□□□□ 0.19
CACNA1A-228ENST00000636610 TTLL11Q8NHH1 800 aa16.24■□□□□ 0.19
CACNA1A-228ENST00000636610 NUP133Q8WUM0 1156 aa16.24■□□□□ 0.19
CACNA1A-228ENST00000636610 ANGEL1Q9UNK9 670 aaKnown RBP16.24■□□□□ 0.19
CACNA1A-228ENST00000636610 PAXBP1Q9Y5B6 917 aa16.24■□□□□ 0.19
CACNA1A-228ENST00000636610 LAMA4Q16363 1823 aa16.24■□□□□ 0.19
CACNA1A-228ENST00000636610 IRS4O14654 1257 aaPredicted RBP16.24■□□□□ 0.19
CACNA1A-228ENST00000636610 CIAO1O76071 339 aa16.24■□□□□ 0.19
CACNA1A-228ENST00000636610 RFX7Q2KHR2 1363 aa16.24■□□□□ 0.19
CACNA1A-228ENST00000636610 ARFGEF2Q9Y6D5 1785 aa16.23■□□□□ 0.19
CACNA1A-228ENST00000636610 GOLGA8AA7E2F4 631 aa16.23■□□□□ 0.19
CACNA1A-228ENST00000636610 FANCCQ00597 558 aa16.23■□□□□ 0.19
CACNA1A-228ENST00000636610 LONRF3Q496Y0 759 aa16.23■□□□□ 0.19
CACNA1A-228ENST00000636610 SHC4Q6S5L8 630 aa16.23■□□□□ 0.19
CACNA1A-228ENST00000636610 MAGEB6Q8N7X4 407 aa16.23■□□□□ 0.19
CACNA1A-228ENST00000636610 ST7Q9NRC1 585 aa16.23■□□□□ 0.19
CACNA1A-228ENST00000636610 WDR17Q8IZU2 1322 aa16.23■□□□□ 0.19
CACNA1A-228ENST00000636610 IFIT3O14879 490 aaKnown RBP16.23■□□□□ 0.19
CACNA1A-228ENST00000636610 CDC25BP30305 580 aa16.23■□□□□ 0.19
CACNA1A-228ENST00000636610 ERCC6LQ2NKX8 1250 aa16.23■□□□□ 0.19
CACNA1A-228ENST00000636610 CCDC102BQ68D86 513 aa16.23■□□□□ 0.19
CACNA1A-228ENST00000636610 APOA5Q6Q788 366 aa16.23■□□□□ 0.19
CACNA1A-228ENST00000636610 CADPS2Q86UW7 1296 aa16.23■□□□□ 0.19
CACNA1A-228ENST00000636610 TRMT44Q8IYL2 757 aaKnown RBP16.23■□□□□ 0.19
CACNA1A-228ENST00000636610 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.23■□□□□ 0.19
CACNA1A-228ENST00000636610 POLR3EQ9NVU0 708 aa16.23■□□□□ 0.19
CACNA1A-228ENST00000636610 BTBD18B2RXH4 712 aa16.22■□□□□ 0.19
CACNA1A-228ENST00000636610 IARSP41252 1262 aaKnown RBP16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms