RNA–Protein interactions for RNA: ENST00000634363.1

SNRNP48-203, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 781 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-203ENST00000634363 IQSEC3Q9UPP2 1182 aaPredicted RBP19.54■□□□□ 0.72
SNRNP48-203ENST00000634363 UNCXA6NJT0 531 aa19.53■□□□□ 0.72
SNRNP48-203ENST00000634363 FRAT2O75474 233 aaPredicted RBP19.53■□□□□ 0.72
SNRNP48-203ENST00000634363 CRHR2Q13324 411 aa19.53■□□□□ 0.72
SNRNP48-203ENST00000634363 NBPF7P0C2Y1 421 aaPredicted RBP19.52■□□□□ 0.72
SNRNP48-203ENST00000634363 SPDYE2Q495Y8 402 aa19.52■□□□□ 0.72
SNRNP48-203ENST00000634363 DZIP1LQ8IYY4 767 aaKnown RBP19.52■□□□□ 0.72
SNRNP48-203ENST00000634363 CD99L2Q8TCZ2 262 aa19.52■□□□□ 0.72
SNRNP48-203ENST00000634363 OPTNQ96CV9 577 aa19.52■□□□□ 0.72
SNRNP48-203ENST00000634363 ERO1AQ96HE7 468 aa19.52■□□□□ 0.72
SNRNP48-203ENST00000634363 SERPINA10Q9UK55 444 aa19.52■□□□□ 0.72
SNRNP48-203ENST00000634363 PTPRCP08575 1304 aa19.51■□□□□ 0.71
SNRNP48-203ENST00000634363 CRKP46108 304 aa19.51■□□□□ 0.71
SNRNP48-203ENST00000634363 CHAF1AQ13111 956 aaPredicted RBP19.51■□□□□ 0.71
SNRNP48-203ENST00000634363 KAZALD1Q96I82 304 aa19.51■□□□□ 0.71
SNRNP48-203ENST00000634363 PTPN18Q99952 460 aa19.51■□□□□ 0.71
SNRNP48-203ENST00000634363 RIPOR2Q9Y4F9 1068 aa19.51■□□□□ 0.71
SNRNP48-203ENST00000634363 TNNI2P48788 182 aa19.5■□□□□ 0.71
SNRNP48-203ENST00000634363 CDAN1Q8IWY9 1227 aa19.5■□□□□ 0.71
SNRNP48-203ENST00000634363 TMEM39BQ9GZU3 492 aa19.5■□□□□ 0.71
SNRNP48-203ENST00000634363 MROH5Q6ZUA9 1318 aa19.5■□□□□ 0.71
SNRNP48-203ENST00000634363 SP3Q02447 781 aa19.49■□□□□ 0.71
SNRNP48-203ENST00000634363 GRIK5Q16478 980 aa19.49■□□□□ 0.71
SNRNP48-203ENST00000634363 METTL24Q5JXM2 366 aa19.49■□□□□ 0.71
SNRNP48-203ENST00000634363 CNKSR2Q8WXI2 1034 aa19.49■□□□□ 0.71
SNRNP48-203ENST00000634363 BICC1Q9H694 974 aaKnown RBP19.49■□□□□ 0.71
SNRNP48-203ENST00000634363 EFCC1Q9HA90 598 aa19.49■□□□□ 0.71
SNRNP48-203ENST00000634363 PCDH10Q9P2E7 1040 aa19.49■□□□□ 0.71
SNRNP48-203ENST00000634363 PTPN22Q9Y2R2 807 aa19.49■□□□□ 0.71
SNRNP48-203ENST00000634363 OTOFQ9HC10 1997 aa19.48■□□□□ 0.71
SNRNP48-203ENST00000634363 LAMB1P07942 1786 aa19.48■□□□□ 0.71
SNRNP48-203ENST00000634363 POTEFA5A3E0 1075 aa19.48■□□□□ 0.71
SNRNP48-203ENST00000634363 RARSP54136 660 aaKnown RBP19.48■□□□□ 0.71
SNRNP48-203ENST00000634363 LRRC24Q50LG9 513 aa19.48■□□□□ 0.71
SNRNP48-203ENST00000634363 CAVIN4Q5BKX8 364 aa19.48■□□□□ 0.71
SNRNP48-203ENST00000634363 INTS3Q68E01 1043 aaKnown RBP19.48■□□□□ 0.71
SNRNP48-203ENST00000634363 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.48■□□□□ 0.71
SNRNP48-203ENST00000634363 TEPSINQ96N21 525 aa19.48■□□□□ 0.71
SNRNP48-203ENST00000634363 KIF16BQ96L93 1317 aa19.48■□□□□ 0.71
SNRNP48-203ENST00000634363 TESPA1A2RU30 521 aaPredicted RBP19.47■□□□□ 0.71
SNRNP48-203ENST00000634363 CACNB3P54284 484 aa19.47■□□□□ 0.71
SNRNP48-203ENST00000634363 MAP3K9P80192 1104 aa19.47■□□□□ 0.71
SNRNP48-203ENST00000634363 FBXO33Q7Z6M2 555 aa19.47■□□□□ 0.71
SNRNP48-203ENST00000634363 CSADQ9Y600 493 aa19.47■□□□□ 0.71
SNRNP48-203ENST00000634363 CCL15-CCL14A0A0B4J2E2 113 aa19.46■□□□□ 0.71
SNRNP48-203ENST00000634363 VGLL4Q14135 290 aa19.46■□□□□ 0.71
SNRNP48-203ENST00000634363 CCL15Q16663 113 aa19.46■□□□□ 0.71
SNRNP48-203ENST00000634363 OTUD5Q96G74 571 aa19.46■□□□□ 0.71
SNRNP48-203ENST00000634363 MS4A4AQ96JQ5 239 aa19.46■□□□□ 0.71
SNRNP48-203ENST00000634363 BCAMP50895 628 aa19.45■□□□□ 0.7
SNRNP48-203ENST00000634363 GTF2A2P52657 109 aa19.45■□□□□ 0.7
SNRNP48-203ENST00000634363 TAF1CQ15572 869 aaPredicted RBP19.45■□□□□ 0.7
SNRNP48-203ENST00000634363 KLHDC4Q8TBB5 520 aa19.45■□□□□ 0.7
SNRNP48-203ENST00000634363 TBC1D22AQ8WUA7 517 aa19.45■□□□□ 0.7
SNRNP48-203ENST00000634363 TEKT1Q969V4 418 aa19.45■□□□□ 0.7
SNRNP48-203ENST00000634363 ARAP2Q8WZ64 1704 aa19.45■□□□□ 0.7
SNRNP48-203ENST00000634363 PDE8BO95263 885 aa19.44■□□□□ 0.7
SNRNP48-203ENST00000634363 CAP1Q01518 475 aa19.44■□□□□ 0.7
SNRNP48-203ENST00000634363 BRI3BPQ8WY22 251 aa19.44■□□□□ 0.7
SNRNP48-203ENST00000634363 ZFYVE28Q9HCC9 887 aa19.44■□□□□ 0.7
SNRNP48-203ENST00000634363 NOB1Q9ULX3 412 aaKnown RBP19.44■□□□□ 0.7
SNRNP48-203ENST00000634363 UTYO14607 1347 aa19.44■□□□□ 0.7
SNRNP48-203ENST00000634363 RABL6Q3YEC7 729 aaPredicted RBP19.43■□□□□ 0.7
SNRNP48-203ENST00000634363 ANKRD44Q8N8A2 993 aa19.43■□□□□ 0.7
SNRNP48-203ENST00000634363 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.43■□□□□ 0.7
SNRNP48-203ENST00000634363 YTHDC1Q96MU7 727 aaKnown RBP19.43■□□□□ 0.7
SNRNP48-203ENST00000634363 API5Q9BZZ5 524 aaKnown RBP19.43■□□□□ 0.7
SNRNP48-203ENST00000634363 TMOD2Q9NZR1 351 aa19.43■□□□□ 0.7
SNRNP48-203ENST00000634363 EN2P19622 333 aaPredicted RBP19.42■□□□□ 0.7
SNRNP48-203ENST00000634363 HDLBPQ00341 1268 aaKnown RBP19.42■□□□□ 0.7
SNRNP48-203ENST00000634363 FAM43AQ8N2R8 423 aa19.42■□□□□ 0.7
SNRNP48-203ENST00000634363 IPO8O15397 1037 aaKnown RBP19.41■□□□□ 0.7
SNRNP48-203ENST00000634363 ARHGEF6Q15052 776 aa19.41■□□□□ 0.7
SNRNP48-203ENST00000634363 ZKSCAN4Q969J2 545 aaPredicted RBP19.41■□□□□ 0.7
SNRNP48-203ENST00000634363 WRNIP1Q96S55 665 aa19.41■□□□□ 0.7
SNRNP48-203ENST00000634363 WDHD1O75717 1129 aaPredicted RBP19.4■□□□□ 0.7
SNRNP48-203ENST00000634363 BCAR3O75815 825 aa19.4■□□□□ 0.7
SNRNP48-203ENST00000634363 MYCP01106 439 aaPredicted RBP19.4■□□□□ 0.7
SNRNP48-203ENST00000634363 IFIT1P09914 478 aaKnown RBP19.4■□□□□ 0.7
SNRNP48-203ENST00000634363 VGLL2Q8N8G2 317 aa19.4■□□□□ 0.7
SNRNP48-203ENST00000634363 FRAT1Q92837 279 aaPredicted RBP19.4■□□□□ 0.7
SNRNP48-203ENST00000634363 ZDHHC15Q96MV8 337 aa19.4■□□□□ 0.7
SNRNP48-203ENST00000634363 TMEM106CQ9BVX2 250 aa19.4■□□□□ 0.7
SNRNP48-203ENST00000634363 AK9Q5TCS8 1911 aa19.39■□□□□ 0.7
SNRNP48-203ENST00000634363 ECM2O94769 699 aaPredicted RBP19.39■□□□□ 0.69
SNRNP48-203ENST00000634363 CETPP11597 493 aa19.39■□□□□ 0.69
SNRNP48-203ENST00000634363 SLC9C1Q4G0N8 1177 aa19.39■□□□□ 0.69
SNRNP48-203ENST00000634363 MIGA2Q7L4E1 593 aa19.39■□□□□ 0.69
SNRNP48-203ENST00000634363 NBPF11Q86T75 865 aa19.39■□□□□ 0.69
SNRNP48-203ENST00000634363 ERO1BQ86YB8 467 aa19.39■□□□□ 0.69
SNRNP48-203ENST00000634363 ARHGAP45Q92619 1136 aa19.39■□□□□ 0.69
SNRNP48-203ENST00000634363 ARMC5Q96C12 935 aa19.39■□□□□ 0.69
SNRNP48-203ENST00000634363 GCC1Q96CN9 775 aa19.39■□□□□ 0.69
SNRNP48-203ENST00000634363 USP44Q9H0E7 712 aa19.39■□□□□ 0.69
SNRNP48-203ENST00000634363 SPDYE5A6NIY4 337 aa19.38■□□□□ 0.69
SNRNP48-203ENST00000634363 MAST3O60307 1309 aa19.38■□□□□ 0.69
SNRNP48-203ENST00000634363 PUM3Q15397 648 aaKnown RBP19.38■□□□□ 0.69
SNRNP48-203ENST00000634363 APOBEC3HQ6NTF7 200 aaKnown RBP19.38■□□□□ 0.69
SNRNP48-203ENST00000634363 HOOK2Q96ED9 719 aa19.38■□□□□ 0.69
SNRNP48-203ENST00000634363 MRIQ9BWK5 157 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms