RNA–Protein interactions for RNA: ENST00000630553.1

SOX2-OT-257, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 905 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-257ENST00000630553 F8W031 263 aaPredicted RBP12.81□□□□□ -0.36
SOX2-OT-257ENST00000630553 H7C1W4 665 aa12.81□□□□□ -0.36
SOX2-OT-257ENST00000630553 USP2O75604 605 aaPredicted RBP12.81□□□□□ -0.36
SOX2-OT-257ENST00000630553 ECM2O94769 699 aaPredicted RBP12.81□□□□□ -0.36
SOX2-OT-257ENST00000630553 KCNJ4P48050 445 aa12.81□□□□□ -0.36
SOX2-OT-257ENST00000630553 MNX1P50219 401 aaPredicted RBP12.81□□□□□ -0.36
SOX2-OT-257ENST00000630553 RBM5P52756 815 aaKnown RBP eCLIP12.81□□□□□ -0.36
SOX2-OT-257ENST00000630553 CWF19L2Q2TBE0 894 aaKnown RBP12.81□□□□□ -0.36
SOX2-OT-257ENST00000630553 ATF7IPQ6VMQ6 1270 aa12.81□□□□□ -0.36
SOX2-OT-257ENST00000630553 NKX2-3Q8TAU0 364 aa12.81□□□□□ -0.36
SOX2-OT-257ENST00000630553 PLA2G12BQ9BX93 195 aa12.81□□□□□ -0.36
SOX2-OT-257ENST00000630553 NOB1Q9ULX3 412 aaKnown RBP12.81□□□□□ -0.36
SOX2-OT-257ENST00000630553 CCL15-CCL14A0A0B4J2E2 113 aa12.8□□□□□ -0.36
SOX2-OT-257ENST00000630553 IPO8O15397 1037 aaKnown RBP12.8□□□□□ -0.36
SOX2-OT-257ENST00000630553 TRIM27P14373 513 aa12.8□□□□□ -0.36
SOX2-OT-257ENST00000630553 GTF2A2P52657 109 aa12.8□□□□□ -0.36
SOX2-OT-257ENST00000630553 CCL15Q16663 113 aa12.8□□□□□ -0.36
SOX2-OT-257ENST00000630553 TXNRD3Q86VQ6 643 aa12.8□□□□□ -0.36
SOX2-OT-257ENST00000630553 ZBED3Q96IU2 234 aaPredicted RBP12.8□□□□□ -0.36
SOX2-OT-257ENST00000630553 SRCIN1Q9C0H9 1055 aa12.8□□□□□ -0.36
SOX2-OT-257ENST00000630553 RCAN3Q9UKA8 241 aa12.8□□□□□ -0.36
SOX2-OT-257ENST00000630553 LEMD3Q9Y2U8 911 aa12.8□□□□□ -0.36
SOX2-OT-257ENST00000630553 LAMA3Q16787 3333 aa12.8□□□□□ -0.36
SOX2-OT-257ENST00000630553 SPEF2Q9C093 1822 aa12.8□□□□□ -0.36
SOX2-OT-257ENST00000630553 SSC5DA1L4H1 1573 aa12.79□□□□□ -0.36
SOX2-OT-257ENST00000630553 IGHMBP2P38935 993 aaKnown RBP12.79□□□□□ -0.36
SOX2-OT-257ENST00000630553 CTSWP56202 376 aa12.79□□□□□ -0.36
SOX2-OT-257ENST00000630553 CFAP100Q494V2 611 aa12.79□□□□□ -0.36
SOX2-OT-257ENST00000630553 ARHGAP39Q9C0H5 1083 aa12.79□□□□□ -0.36
SOX2-OT-257ENST00000630553 ZNF804BA4D1E1 1349 aa12.79□□□□□ -0.36
SOX2-OT-257ENST00000630553 LAMB1P07942 1786 aa12.79□□□□□ -0.36
SOX2-OT-257ENST00000630553 GRM8O00222 908 aa12.78□□□□□ -0.36
SOX2-OT-257ENST00000630553 GNRH1P01148 92 aa12.78□□□□□ -0.36
SOX2-OT-257ENST00000630553 RASA3Q14644 834 aa12.78□□□□□ -0.36
SOX2-OT-257ENST00000630553 MTFR1Q15390 333 aa12.78□□□□□ -0.36
SOX2-OT-257ENST00000630553 ZKSCAN2Q63HK3 967 aa12.78□□□□□ -0.36
SOX2-OT-257ENST00000630553 BRI3BPQ8WY22 251 aa12.78□□□□□ -0.36
SOX2-OT-257ENST00000630553 MS4A4AQ96JQ5 239 aa12.78□□□□□ -0.36
SOX2-OT-257ENST00000630553 YTHDC1Q96MU7 727 aaKnown RBP12.78□□□□□ -0.36
SOX2-OT-257ENST00000630553 GREM2Q9H772 168 aa12.78□□□□□ -0.36
SOX2-OT-257ENST00000630553 BIN2Q9UBW5 565 aaPredicted RBP12.78□□□□□ -0.36
SOX2-OT-257ENST00000630553 PCDHAC2Q9Y5I4 1007 aa12.78□□□□□ -0.36
SOX2-OT-257ENST00000630553 PRMT2P55345 433 aa12.77□□□□□ -0.37
SOX2-OT-257ENST00000630553 LACTBP83111 547 aaPredicted RBP12.77□□□□□ -0.37
SOX2-OT-257ENST00000630553 FAM43AQ8N2R8 423 aa12.77□□□□□ -0.37
SOX2-OT-257ENST00000630553 MTMR14Q8NCE2 650 aa12.77□□□□□ -0.37
SOX2-OT-257ENST00000630553 RAET1EQ8TD07 263 aa12.77□□□□□ -0.37
SOX2-OT-257ENST00000630553 SHISA4Q96DD7 197 aa12.77□□□□□ -0.37
SOX2-OT-257ENST00000630553 LRCH3Q96II8 777 aa12.77□□□□□ -0.37
SOX2-OT-257ENST00000630553 PRMT6Q96LA8 375 aaPredicted RBP12.77□□□□□ -0.37
SOX2-OT-257ENST00000630553 MPHOSPH8Q99549 860 aa12.77□□□□□ -0.37
SOX2-OT-257ENST00000630553 ANKRD2Q9GZV1 360 aa12.77□□□□□ -0.37
SOX2-OT-257ENST00000630553 CSADQ9Y600 493 aa12.77□□□□□ -0.37
SOX2-OT-257ENST00000630553 ZNF646O15015 1829 aaPredicted RBP12.76□□□□□ -0.37
SOX2-OT-257ENST00000630553 UNC80Q8N2C7 3258 aa12.76□□□□□ -0.37
SOX2-OT-257ENST00000630553 A0A1W2PPC1 479 aa12.76□□□□□ -0.37
SOX2-OT-257ENST00000630553 SPDYE2BA6NHP3 402 aa12.76□□□□□ -0.37
SOX2-OT-257ENST00000630553 EVI5O60447 810 aa12.76□□□□□ -0.37
SOX2-OT-257ENST00000630553 TLR2O60603 784 aa12.76□□□□□ -0.37
SOX2-OT-257ENST00000630553 SPDYE6P0CI01 402 aa12.76□□□□□ -0.37
SOX2-OT-257ENST00000630553 KLRK1P26718 216 aa12.76□□□□□ -0.37
SOX2-OT-257ENST00000630553 HOXD10P28358 340 aa12.76□□□□□ -0.37
SOX2-OT-257ENST00000630553 TNFAIP1Q13829 316 aa12.76□□□□□ -0.37
SOX2-OT-257ENST00000630553 UBE3BQ7Z3V4 1068 aa12.76□□□□□ -0.37
SOX2-OT-257ENST00000630553 TTLL11Q8NHH1 800 aa12.76□□□□□ -0.37
SOX2-OT-257ENST00000630553 RNF208Q9H0X6 261 aa12.76□□□□□ -0.37
SOX2-OT-257ENST00000630553 CD209Q9NNX6 404 aa12.76□□□□□ -0.37
SOX2-OT-257ENST00000630553 U3KPZ7 1027 aaPredicted RBP12.76□□□□□ -0.37
SOX2-OT-257ENST00000630553 SOX1O00570 391 aaPredicted RBP12.75□□□□□ -0.37
SOX2-OT-257ENST00000630553 ZBTB7BO15156 539 aaPredicted RBP12.75□□□□□ -0.37
SOX2-OT-257ENST00000630553 GRK4P32298 578 aa12.75□□□□□ -0.37
SOX2-OT-257ENST00000630553 GJA8P48165 433 aa12.75□□□□□ -0.37
SOX2-OT-257ENST00000630553 ECM29Q5VYK3 1845 aa12.75□□□□□ -0.37
SOX2-OT-257ENST00000630553 SLC4A10Q6U841 1118 aa12.75□□□□□ -0.37
SOX2-OT-257ENST00000630553 USP44Q9H0E7 712 aa12.75□□□□□ -0.37
SOX2-OT-257ENST00000630553 PRO3102Q9H379 93 aa12.75□□□□□ -0.37
SOX2-OT-257ENST00000630553 FMNL1O95466 1100 aaPredicted RBP12.74□□□□□ -0.37
SOX2-OT-257ENST00000630553 CSF1RP07333 972 aa12.74□□□□□ -0.37
SOX2-OT-257ENST00000630553 CETPP11597 493 aa12.74□□□□□ -0.37
SOX2-OT-257ENST00000630553 CCL5P13501 91 aa12.74□□□□□ -0.37
SOX2-OT-257ENST00000630553 PSMC4P43686 418 aa12.74□□□□□ -0.37
SOX2-OT-257ENST00000630553 UBXN2AP68543 259 aa12.74□□□□□ -0.37
SOX2-OT-257ENST00000630553 MAP3K9P80192 1104 aa12.74□□□□□ -0.37
SOX2-OT-257ENST00000630553 VGLL4Q14135 290 aa12.74□□□□□ -0.37
SOX2-OT-257ENST00000630553 RABL6Q3YEC7 729 aaPredicted RBP12.74□□□□□ -0.37
SOX2-OT-257ENST00000630553 CERS5Q8N5B7 392 aa12.74□□□□□ -0.37
SOX2-OT-257ENST00000630553 TRIM47Q96LD4 638 aa12.74□□□□□ -0.37
SOX2-OT-257ENST00000630553 STAP2Q9UGK3 403 aa12.74□□□□□ -0.37
SOX2-OT-257ENST00000630553 FARP2O94887 1054 aaPredicted RBP12.73□□□□□ -0.37
SOX2-OT-257ENST00000630553 GJB1P08034 283 aa12.73□□□□□ -0.37
SOX2-OT-257ENST00000630553 NBPF7P0C2Y1 421 aaPredicted RBP12.73□□□□□ -0.37
SOX2-OT-257ENST00000630553 MS4A1P11836 297 aa12.73□□□□□ -0.37
SOX2-OT-257ENST00000630553 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.73□□□□□ -0.37
SOX2-OT-257ENST00000630553 DZIP1LQ8IYY4 767 aaKnown RBP12.73□□□□□ -0.37
SOX2-OT-257ENST00000630553 DEFB123Q8N688 67 aa12.73□□□□□ -0.37
SOX2-OT-257ENST00000630553 FRAT1Q92837 279 aaPredicted RBP12.73□□□□□ -0.37
SOX2-OT-257ENST00000630553 KAZALD1Q96I82 304 aa12.73□□□□□ -0.37
SOX2-OT-257ENST00000630553 SRRDQ9UH36 339 aa12.73□□□□□ -0.37
SOX2-OT-257ENST00000630553 TNNQ9UQP3 1299 aa12.73□□□□□ -0.37
SOX2-OT-257ENST00000630553 JAG2Q9Y219 1238 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms