RNA–Protein interactions for RNA: ENST00000629725.2

TARDBP-228, Transcript of TAR DNA binding protein, humanhuman

TSL 5 BASIC

Gene TARDBP, Length 1,031 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-228ENST00000629725 PTCH2Q9Y6C5 1203 aa25.58■■□□□ 1.69
TARDBP-228ENST00000629725 VGLL4Q14135 290 aa25.57■■□□□ 1.68
TARDBP-228ENST00000629725 SLC4A8Q2Y0W8 1093 aa25.57■■□□□ 1.68
TARDBP-228ENST00000629725 CDAN1Q8IWY9 1227 aa25.57■■□□□ 1.68
TARDBP-228ENST00000629725 DZIP1LQ8IYY4 767 aaKnown RBP25.57■■□□□ 1.68
TARDBP-228ENST00000629725 TDRD7Q8NHU6 1098 aaKnown RBP25.57■■□□□ 1.68
TARDBP-228ENST00000629725 IL16Q14005 1332 aa25.57■■□□□ 1.68
TARDBP-228ENST00000629725 TCP10L2B9ZVM9 353 aa25.56■■□□□ 1.68
TARDBP-228ENST00000629725 TNNI2P48788 182 aa25.56■■□□□ 1.68
TARDBP-228ENST00000629725 MAP3K9P80192 1104 aa25.56■■□□□ 1.68
TARDBP-228ENST00000629725 TMEM39BQ9GZU3 492 aa25.56■■□□□ 1.68
TARDBP-228ENST00000629725 CSADQ9Y600 493 aa25.56■■□□□ 1.68
TARDBP-228ENST00000629725 BEND3Q5T5X7 828 aa25.55■■□□□ 1.68
TARDBP-228ENST00000629725 FAM43AQ8N2R8 423 aa25.55■■□□□ 1.68
TARDBP-228ENST00000629725 DDX55Q8NHQ9 600 aaKnown RBP eCLIP25.55■■□□□ 1.68
TARDBP-228ENST00000629725 OTUD5Q96G74 571 aa25.55■■□□□ 1.68
TARDBP-228ENST00000629725 COLQQ9Y215 455 aaPredicted RBP25.55■■□□□ 1.68
TARDBP-228ENST00000629725 F6X3S4 739 aa25.54■■□□□ 1.68
TARDBP-228ENST00000629725 HIBADHP31937 336 aaKnown RBP25.54■■□□□ 1.68
TARDBP-228ENST00000629725 GYG1P46976 350 aa25.54■■□□□ 1.68
TARDBP-228ENST00000629725 UBE4AQ14139 1066 aa25.54■■□□□ 1.68
TARDBP-228ENST00000629725 EPHA10Q5JZY3 1008 aa25.54■■□□□ 1.68
TARDBP-228ENST00000629725 CEP290O15078 2479 aa25.54■■□□□ 1.68
TARDBP-228ENST00000629725 VAMP4O75379 141 aa25.53■■□□□ 1.68
TARDBP-228ENST00000629725 WDHD1O75717 1129 aaPredicted RBP25.53■■□□□ 1.68
TARDBP-228ENST00000629725 CRKP46108 304 aa25.53■■□□□ 1.68
TARDBP-228ENST00000629725 FANCIQ9NVI1 1328 aa25.53■■□□□ 1.68
TARDBP-228ENST00000629725 MYCP01106 439 aaPredicted RBP25.52■■□□□ 1.68
TARDBP-228ENST00000629725 FAM84BQ96KN1 310 aaPredicted RBP25.52■■□□□ 1.68
TARDBP-228ENST00000629725 GRM8O00222 908 aa25.51■■□□□ 1.67
TARDBP-228ENST00000629725 KIF22Q14807 665 aa25.51■■□□□ 1.67
TARDBP-228ENST00000629725 ZSWIM8A7E2V4 1837 aa25.51■■□□□ 1.67
TARDBP-228ENST00000629725 RANBP2P49792 3224 aaKnown RBP25.5■■□□□ 1.67
TARDBP-228ENST00000629725 TLR2O60603 784 aa25.5■■□□□ 1.67
TARDBP-228ENST00000629725 SPDYE5A6NIY4 337 aa25.49■■□□□ 1.67
TARDBP-228ENST00000629725 CETPP11597 493 aa25.49■■□□□ 1.67
TARDBP-228ENST00000629725 SH3TC2Q8TF17 1288 aa25.49■■□□□ 1.67
TARDBP-228ENST00000629725 C9orf78Q9NZ63 289 aaPredicted RBP25.49■■□□□ 1.67
TARDBP-228ENST00000629725 LACTBP83111 547 aaPredicted RBP25.48■■□□□ 1.67
TARDBP-228ENST00000629725 ERO1BQ86YB8 467 aa25.48■■□□□ 1.67
TARDBP-228ENST00000629725 ARHGAP39Q9C0H5 1083 aa25.48■■□□□ 1.67
TARDBP-228ENST00000629725 ZCCHC17Q9NP64 241 aaKnown RBP25.48■■□□□ 1.67
TARDBP-228ENST00000629725 GNRH1P01148 92 aa25.47■■□□□ 1.67
TARDBP-228ENST00000629725 NCBP3Q53F19 620 aaKnown RBP25.47■■□□□ 1.67
TARDBP-228ENST00000629725 VPS37DQ86XT2 251 aa25.47■■□□□ 1.67
TARDBP-228ENST00000629725 SNCAIPQ9Y6H5 919 aa25.47■■□□□ 1.67
TARDBP-228ENST00000629725 BTBD19C9JJ37 291 aa25.46■■□□□ 1.67
TARDBP-228ENST00000629725 H0YGN5 161 aa25.46■■□□□ 1.67
TARDBP-228ENST00000629725 HDLBPQ00341 1268 aaKnown RBP25.46■■□□□ 1.67
TARDBP-228ENST00000629725 EXOSC9Q06265 439 aaKnown RBP25.46■■□□□ 1.67
TARDBP-228ENST00000629725 GRIK5Q16478 980 aa25.46■■□□□ 1.67
TARDBP-228ENST00000629725 WRNIP1Q96S55 665 aa25.46■■□□□ 1.67
TARDBP-228ENST00000629725 PUS3Q9BZE2 481 aaKnown RBP25.46■■□□□ 1.67
TARDBP-228ENST00000629725 TRIOBPQ9H2D6 2365 aa25.46■■□□□ 1.67
TARDBP-228ENST00000629725 CACNB3P54284 484 aa25.45■■□□□ 1.66
TARDBP-228ENST00000629725 SNAPC2Q13487 334 aa25.45■■□□□ 1.66
TARDBP-228ENST00000629725 CCDC184Q52MB2 194 aa25.45■■□□□ 1.66
TARDBP-228ENST00000629725 TBC1D22AQ8WUA7 517 aa25.45■■□□□ 1.66
TARDBP-228ENST00000629725 ZKSCAN4Q969J2 545 aaPredicted RBP25.45■■□□□ 1.66
TARDBP-228ENST00000629725 TEKT1Q969V4 418 aa25.45■■□□□ 1.66
TARDBP-228ENST00000629725 IQSEC3Q9UPP2 1182 aaPredicted RBP25.45■■□□□ 1.66
TARDBP-228ENST00000629725 MROH5Q6ZUA9 1318 aa25.44■■□□□ 1.66
TARDBP-228ENST00000629725 IRF6O14896 467 aa25.44■■□□□ 1.66
TARDBP-228ENST00000629725 FRAT2O75474 233 aaPredicted RBP25.44■■□□□ 1.66
TARDBP-228ENST00000629725 PRMT2P55345 433 aa25.44■■□□□ 1.66
TARDBP-228ENST00000629725 CHAF1AQ13111 956 aaPredicted RBP25.44■■□□□ 1.66
TARDBP-228ENST00000629725 HOOK2Q96ED9 719 aa25.44■■□□□ 1.66
TARDBP-228ENST00000629725 FBXO33Q7Z6M2 555 aa25.43■■□□□ 1.66
TARDBP-228ENST00000629725 TMOD2Q9NZR1 351 aa25.43■■□□□ 1.66
TARDBP-228ENST00000629725 RIPOR2Q9Y4F9 1068 aa25.43■■□□□ 1.66
TARDBP-228ENST00000629725 ALDH1L1O75891 902 aa25.42■■□□□ 1.66
TARDBP-228ENST00000629725 PPIL2Q13356 520 aa25.42■■□□□ 1.66
TARDBP-228ENST00000629725 CAVIN4Q5BKX8 364 aa25.42■■□□□ 1.66
TARDBP-228ENST00000629725 FAM83AQ86UY5 434 aa25.42■■□□□ 1.66
TARDBP-228ENST00000629725 WDR63Q8IWG1 891 aa25.42■■□□□ 1.66
TARDBP-228ENST00000629725 SLC4A10Q6U841 1118 aa25.41■■□□□ 1.66
TARDBP-228ENST00000629725 SUCLG2Q96I99 432 aa25.41■■□□□ 1.66
TARDBP-228ENST00000629725 ZDHHC15Q96MV8 337 aa25.41■■□□□ 1.66
TARDBP-228ENST00000629725 ECM2O94769 699 aaPredicted RBP25.4■■□□□ 1.66
TARDBP-228ENST00000629725 FKBP1CQ5VVH2 108 aa25.4■■□□□ 1.66
TARDBP-228ENST00000629725 DCAF15Q66K64 600 aa25.4■■□□□ 1.66
TARDBP-228ENST00000629725 MRIQ9BWK5 157 aa25.4■■□□□ 1.66
TARDBP-228ENST00000629725 SRCIN1Q9C0H9 1055 aa25.4■■□□□ 1.66
TARDBP-228ENST00000629725 SALL2Q9Y467 1007 aaPredicted RBP25.4■■□□□ 1.66
TARDBP-228ENST00000629725 PPATQ06203 517 aa25.39■■□□□ 1.66
TARDBP-228ENST00000629725 C17orf99Q6UX52 265 aa25.39■■□□□ 1.66
TARDBP-228ENST00000629725 CHRDL2Q6WN34 429 aa25.39■■□□□ 1.66
TARDBP-228ENST00000629725 KAZALD1Q96I82 304 aa25.39■■□□□ 1.66
TARDBP-228ENST00000629725 MTFR1Q15390 333 aa25.38■■□□□ 1.65
TARDBP-228ENST00000629725 APOBEC3HQ6NTF7 200 aaKnown RBP25.38■■□□□ 1.65
TARDBP-228ENST00000629725 DPF3Q92784 378 aa25.38■■□□□ 1.65
TARDBP-228ENST00000629725 MAST3O60307 1309 aa25.37■■□□□ 1.65
TARDBP-228ENST00000629725 PSMC4P43686 418 aa25.37■■□□□ 1.65
TARDBP-228ENST00000629725 METTL24Q5JXM2 366 aa25.37■■□□□ 1.65
TARDBP-228ENST00000629725 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.37■■□□□ 1.65
TARDBP-228ENST00000629725 SHISA4Q96DD7 197 aa25.37■■□□□ 1.65
TARDBP-228ENST00000629725 ZNF341Q9BYN7 854 aa25.37■■□□□ 1.65
TARDBP-228ENST00000629725 SRRDQ9UH36 339 aa25.37■■□□□ 1.65
TARDBP-228ENST00000629725 CPA4Q9UI42 421 aa25.37■■□□□ 1.65
TARDBP-228ENST00000629725 AK9Q5TCS8 1911 aa25.36■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms