RNA–Protein interactions for RNA: ENST00000628979.2

CIRBP-246, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2 BASIC

Gene CIRBP, Length 1,043 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-246ENST00000628979 TDRD3Q9H7E2 651 aaKnown RBP25.47■■□□□ 1.67
CIRBP-246ENST00000628979 EXOC6BQ9Y2D4 811 aa25.47■■□□□ 1.67
CIRBP-246ENST00000628979 NOP58Q9Y2X3 529 aaKnown RBP25.47■■□□□ 1.67
CIRBP-246ENST00000628979 SEMA3EO15041 775 aa25.46■■□□□ 1.67
CIRBP-246ENST00000628979 ECE1P42892 770 aa25.46■■□□□ 1.67
CIRBP-246ENST00000628979 TEKT1Q969V4 418 aa25.46■■□□□ 1.67
CIRBP-246ENST00000628979 SUGT1Q9Y2Z0 365 aa25.46■■□□□ 1.67
CIRBP-246ENST00000628979 TTLL12Q14166 644 aaPredicted RBP25.45■■□□□ 1.66
CIRBP-246ENST00000628979 TNNI3KQ59H18 835 aa25.45■■□□□ 1.66
CIRBP-246ENST00000628979 RPAP2Q8IXW5 612 aaPredicted RBP25.45■■□□□ 1.66
CIRBP-246ENST00000628979 DEFB129Q9H1M3 183 aa25.45■■□□□ 1.66
CIRBP-246ENST00000628979 ZNF70Q9UC06 446 aaPredicted RBP25.45■■□□□ 1.66
CIRBP-246ENST00000628979 FPGT-TNNI3KV9GXZ4 949 aa25.45■■□□□ 1.66
CIRBP-246ENST00000628979 MAST3O60307 1309 aa25.44■■□□□ 1.66
CIRBP-246ENST00000628979 HDLBPQ00341 1268 aaKnown RBP25.44■■□□□ 1.66
CIRBP-246ENST00000628979 RASGRF1Q13972 1273 aa25.44■■□□□ 1.66
CIRBP-246ENST00000628979 LDHBP07195 334 aaKnown RBP25.43■■□□□ 1.66
CIRBP-246ENST00000628979 PRDX5P30044 214 aa25.43■■□□□ 1.66
CIRBP-246ENST00000628979 NF2P35240 595 aa25.43■■□□□ 1.66
CIRBP-246ENST00000628979 PRKG1Q13976 671 aa25.43■■□□□ 1.66
CIRBP-246ENST00000628979 MOB2Q70IA6 237 aa25.43■■□□□ 1.66
CIRBP-246ENST00000628979 GPR108Q9NPR9 543 aa25.43■■□□□ 1.66
CIRBP-246ENST00000628979 APBB1O00213 710 aa25.42■■□□□ 1.66
CIRBP-246ENST00000628979 AOC2O75106 756 aa25.42■■□□□ 1.66
CIRBP-246ENST00000628979 HMMRO75330 724 aa25.42■■□□□ 1.66
CIRBP-246ENST00000628979 SPDYE2Q495Y8 402 aa25.42■■□□□ 1.66
CIRBP-246ENST00000628979 DBNDD2Q9BQY9 259 aa25.42■■□□□ 1.66
CIRBP-246ENST00000628979 BCL11AQ9H165 835 aa25.42■■□□□ 1.66
CIRBP-246ENST00000628979 ABCF2Q9UG63 623 aa25.42■■□□□ 1.66
CIRBP-246ENST00000628979 TCP10L2B9ZVM9 353 aa25.41■■□□□ 1.66
CIRBP-246ENST00000628979 HSPA1AP0DMV8 641 aaKnown RBP25.41■■□□□ 1.66
CIRBP-246ENST00000628979 HSPA1BP0DMV9 641 aaKnown RBP25.41■■□□□ 1.66
CIRBP-246ENST00000628979 RRP1P56182 461 aaKnown RBP25.41■■□□□ 1.66
CIRBP-246ENST00000628979 TTC39AQ5SRH9 613 aa25.41■■□□□ 1.66
CIRBP-246ENST00000628979 SIRT2Q8IXJ6 389 aa25.41■■□□□ 1.66
CIRBP-246ENST00000628979 HHIPL1Q96JK4 782 aa25.41■■□□□ 1.66
CIRBP-246ENST00000628979 CCDC8Q9H0W5 538 aaPredicted RBP25.41■■□□□ 1.66
CIRBP-246ENST00000628979 UBE2Q2LH0YL09 131 aa25.4■■□□□ 1.66
CIRBP-246ENST00000628979 DIXDC1Q155Q3 683 aa25.4■■□□□ 1.66
CIRBP-246ENST00000628979 CCDC158Q5M9N0 1113 aa25.4■■□□□ 1.66
CIRBP-246ENST00000628979 RGMBQ6NW40 437 aa25.4■■□□□ 1.66
CIRBP-246ENST00000628979 ERC1Q8IUD2 1116 aa25.4■■□□□ 1.66
CIRBP-246ENST00000628979 ZGPATQ8N5A5 531 aaKnown RBP25.4■■□□□ 1.66
CIRBP-246ENST00000628979 ZDHHC15Q96MV8 337 aa25.4■■□□□ 1.66
CIRBP-246ENST00000628979 MRIQ9BWK5 157 aa25.4■■□□□ 1.66
CIRBP-246ENST00000628979 HMG20BQ9P0W2 317 aa25.4■■□□□ 1.66
CIRBP-246ENST00000628979 SALL1Q9NSC2 1324 aa25.39■■□□□ 1.66
CIRBP-246ENST00000628979 UQCRFS1P1P0C7P4 283 aa25.39■■□□□ 1.66
CIRBP-246ENST00000628979 ZNF157P51786 506 aaPredicted RBP25.39■■□□□ 1.66
CIRBP-246ENST00000628979 CACNB3P54284 484 aa25.39■■□□□ 1.66
CIRBP-246ENST00000628979 RASA3Q14644 834 aa25.39■■□□□ 1.66
CIRBP-246ENST00000628979 HSP90AB4PQ58FF6 505 aa25.39■■□□□ 1.66
CIRBP-246ENST00000628979 HHIPL2Q6UWX4 724 aa25.39■■□□□ 1.66
CIRBP-246ENST00000628979 PI16Q6UXB8 463 aa25.39■■□□□ 1.66
CIRBP-246ENST00000628979 SPATA5Q8NB90 893 aa25.39■■□□□ 1.66
CIRBP-246ENST00000628979 ARID4AP29374 1257 aaPredicted RBP25.38■■□□□ 1.65
CIRBP-246ENST00000628979 FKBP1BP68106 108 aa25.38■■□□□ 1.65
CIRBP-246ENST00000628979 TNFAIP1Q13829 316 aa25.38■■□□□ 1.65
CIRBP-246ENST00000628979 EAF2Q96CJ1 260 aaPredicted RBP25.38■■□□□ 1.65
CIRBP-246ENST00000628979 ZBTB4Q9P1Z0 1013 aaPredicted RBP25.38■■□□□ 1.65
CIRBP-246ENST00000628979 FZD1Q9UP38 647 aa25.38■■□□□ 1.65
CIRBP-246ENST00000628979 PPP2R3BQ9Y5P8 575 aa25.38■■□□□ 1.65
CIRBP-246ENST00000628979 PAPPA2Q9BXP8 1791 aa25.38■■□□□ 1.65
CIRBP-246ENST00000628979 SPTY2D1Q68D10 685 aaPredicted RBP25.37■■□□□ 1.65
CIRBP-246ENST00000628979 APOBEC3HQ6NTF7 200 aaKnown RBP25.37■■□□□ 1.65
CIRBP-246ENST00000628979 DZIP1Q86YF9 867 aaKnown RBP25.37■■□□□ 1.65
CIRBP-246ENST00000628979 IL1RAPL2Q9NP60 686 aa25.37■■□□□ 1.65
CIRBP-246ENST00000628979 SNRKQ9NRH2 765 aa25.37■■□□□ 1.65
CIRBP-246ENST00000628979 TLR7Q9NYK1 1049 aaKnown RBP25.37■■□□□ 1.65
CIRBP-246ENST00000628979 TMOD2Q9NZR1 351 aa25.37■■□□□ 1.65
CIRBP-246ENST00000628979 PDS5AQ29RF7 1337 aaKnown RBP25.37■■□□□ 1.65
CIRBP-246ENST00000628979 ZBTB22O15209 634 aa25.36■■□□□ 1.65
CIRBP-246ENST00000628979 MCAMP43121 646 aa25.36■■□□□ 1.65
CIRBP-246ENST00000628979 TNNI2P48788 182 aa25.36■■□□□ 1.65
CIRBP-246ENST00000628979 NBPF12Q5TAG4 269 aaPredicted RBP25.36■■□□□ 1.65
CIRBP-246ENST00000628979 TBC1D9Q6ZT07 1266 aa25.36■■□□□ 1.65
CIRBP-246ENST00000628979 ERICH6Q7L0X2 663 aa25.36■■□□□ 1.65
CIRBP-246ENST00000628979 ARMC9Q7Z3E5 817 aa25.36■■□□□ 1.65
CIRBP-246ENST00000628979 RHPN1Q8TCX5 695 aa25.36■■□□□ 1.65
CIRBP-246ENST00000628979 DBNLQ9UJU6 430 aaKnown RBP25.36■■□□□ 1.65
CIRBP-246ENST00000628979 DAGLAQ9Y4D2 1042 aa25.36■■□□□ 1.65
CIRBP-246ENST00000628979 SUPT20HL1Q3ZLR7 823 aa25.35■■□□□ 1.65
CIRBP-246ENST00000628979 AACSQ86V21 672 aa25.35■■□□□ 1.65
CIRBP-246ENST00000628979 AIDAQ96BJ3 306 aa25.35■■□□□ 1.65
CIRBP-246ENST00000628979 ANGEL1Q9UNK9 670 aaKnown RBP25.35■■□□□ 1.65
CIRBP-246ENST00000628979 PCNTO95613 3336 aa25.34■■□□□ 1.65
CIRBP-246ENST00000628979 CCDC102AQ96A19 550 aa25.34■■□□□ 1.65
CIRBP-246ENST00000628979 TMEM39BQ9GZU3 492 aa25.34■■□□□ 1.65
CIRBP-246ENST00000628979 MYH2Q9UKX2 1941 aa25.33■■□□□ 1.65
CIRBP-246ENST00000628979 MAP2K2P36507 400 aa25.33■■□□□ 1.65
CIRBP-246ENST00000628979 MAP2K1Q02750 393 aaPredicted RBP25.33■■□□□ 1.65
CIRBP-246ENST00000628979 ZIC5Q96T25 663 aa25.33■■□□□ 1.65
CIRBP-246ENST00000628979 RAI14Q9P0K7 980 aa25.33■■□□□ 1.65
CIRBP-246ENST00000628979 NOGQ13253 232 aa25.32■■□□□ 1.64
CIRBP-246ENST00000628979 CDC42EP5Q6NZY7 148 aa25.32■■□□□ 1.64
CIRBP-246ENST00000628979 KIF1BPQ96EK5 621 aa25.32■■□□□ 1.64
CIRBP-246ENST00000628979 USP40Q9NVE5 1235 aa25.32■■□□□ 1.64
CIRBP-246ENST00000628979 WBP1LQ9NX94 342 aa25.32■■□□□ 1.64
CIRBP-246ENST00000628979 FAM155AB1AL88 458 aaPredicted RBP25.31■■□□□ 1.64
CIRBP-246ENST00000628979 PPP1R12BO60237 982 aaPredicted RBP25.31■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms