RNA–Protein interactions for RNA: ENST00000628906.2

LINC00649-220, long intergenic non-protein coding RNA 649, humanhuman

TSL 5

Gene LINC00649, Length 625 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-220ENST00000628906 KRT37O76014 449 aa8.17□□□□□ -1.1
LINC00649-220ENST00000628906 SASH1O94885 1247 aa8.17□□□□□ -1.1
LINC00649-220ENST00000628906 CETPP11597 493 aa8.17□□□□□ -1.1
LINC00649-220ENST00000628906 FLT3LGP49771 235 aa8.17□□□□□ -1.1
LINC00649-220ENST00000628906 PDE3AQ14432 1141 aa8.17□□□□□ -1.1
LINC00649-220ENST00000628906 C9orf50Q5SZB4 431 aa8.17□□□□□ -1.1
LINC00649-220ENST00000628906 NBPF12Q5TAG4 269 aaPredicted RBP8.17□□□□□ -1.1
LINC00649-220ENST00000628906 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.17□□□□□ -1.1
LINC00649-220ENST00000628906 TTLL7Q6ZT98 887 aa8.17□□□□□ -1.1
LINC00649-220ENST00000628906 KHSRPQ92945 711 aaKnown RBP eCLIP8.17□□□□□ -1.1
LINC00649-220ENST00000628906 TPRP12270 2363 aaKnown RBP8.16□□□□□ -1.1
LINC00649-220ENST00000628906 HCLS1P14317 486 aaPredicted RBP8.16□□□□□ -1.1
LINC00649-220ENST00000628906 FCGRTP55899 365 aa8.16□□□□□ -1.1
LINC00649-220ENST00000628906 LRRC26Q2I0M4 334 aa8.16□□□□□ -1.1
LINC00649-220ENST00000628906 DACT2Q5SW24 774 aa8.16□□□□□ -1.1
LINC00649-220ENST00000628906 CELF1Q92879 486 aaKnown RBP8.16□□□□□ -1.1
LINC00649-220ENST00000628906 SIPA1L3O60292 1781 aaPredicted RBP8.15□□□□□ -1.1
LINC00649-220ENST00000628906 CEMIPQ8WUJ3 1361 aa8.15□□□□□ -1.1
LINC00649-220ENST00000628906 ANKRD11Q6UB99 2663 aaPredicted RBP8.15□□□□□ -1.1
LINC00649-220ENST00000628906 MYO3BQ8WXR4 1341 aa8.15□□□□□ -1.1
LINC00649-220ENST00000628906 GNAT3A8MTJ3 354 aa8.15□□□□□ -1.1
LINC00649-220ENST00000628906 AAK1Q2M2I8 961 aa8.15□□□□□ -1.1
LINC00649-220ENST00000628906 ERMP1Q7Z2K6 904 aa8.15□□□□□ -1.1
LINC00649-220ENST00000628906 NGEFQ8N5V2 710 aa8.15□□□□□ -1.1
LINC00649-220ENST00000628906 GAS2L1Q99501 681 aaPredicted RBP8.15□□□□□ -1.1
LINC00649-220ENST00000628906 ZNF576Q9H609 170 aa8.15□□□□□ -1.1
LINC00649-220ENST00000628906 ZNF804BA4D1E1 1349 aa8.14□□□□□ -1.11
LINC00649-220ENST00000628906 BCRP11274 1271 aa8.14□□□□□ -1.11
LINC00649-220ENST00000628906 ITGB8P26012 769 aa8.14□□□□□ -1.11
LINC00649-220ENST00000628906 KIF6Q6ZMV9 814 aa8.14□□□□□ -1.11
LINC00649-220ENST00000628906 MXD3Q9BW11 206 aa8.14□□□□□ -1.11
LINC00649-220ENST00000628906 ZBTB3Q9H5J0 574 aa8.14□□□□□ -1.11
LINC00649-220ENST00000628906 CFAP47Q6ZTR5 3102 aa8.13□□□□□ -1.11
LINC00649-220ENST00000628906 LAMB2P55268 1798 aa8.13□□□□□ -1.11
LINC00649-220ENST00000628906 DDX60LQ5H9U9 1706 aaKnown RBP8.13□□□□□ -1.11
LINC00649-220ENST00000628906 SPDYE5A6NIY4 337 aa8.13□□□□□ -1.11
LINC00649-220ENST00000628906 SPDYE4A6NLX3 237 aa8.13□□□□□ -1.11
LINC00649-220ENST00000628906 U2AF1L5P0DN76 240 aaPredicted RBP8.13□□□□□ -1.11
LINC00649-220ENST00000628906 MAP3K9P80192 1104 aa8.13□□□□□ -1.11
LINC00649-220ENST00000628906 U2AF1Q01081 240 aaKnown RBP eCLIP8.13□□□□□ -1.11
LINC00649-220ENST00000628906 SNAPC2Q13487 334 aa8.13□□□□□ -1.11
LINC00649-220ENST00000628906 VGLL4Q14135 290 aa8.13□□□□□ -1.11
LINC00649-220ENST00000628906 STRIP1Q5VSL9 837 aa8.13□□□□□ -1.11
LINC00649-220ENST00000628906 ZBTB38Q8NAP3 1195 aaPredicted RBP8.13□□□□□ -1.11
LINC00649-220ENST00000628906 TRANK1O15050 2925 aa8.13□□□□□ -1.11
LINC00649-220ENST00000628906 SPDYE2BA6NHP3 402 aa8.12□□□□□ -1.11
LINC00649-220ENST00000628906 IRF6O14896 467 aa8.12□□□□□ -1.11
LINC00649-220ENST00000628906 UFL1O94874 794 aa8.12□□□□□ -1.11
LINC00649-220ENST00000628906 HMOX1P09601 288 aa8.12□□□□□ -1.11
LINC00649-220ENST00000628906 SPDYE6P0CI01 402 aa8.12□□□□□ -1.11
LINC00649-220ENST00000628906 DNAJB2P25686 324 aa8.12□□□□□ -1.11
LINC00649-220ENST00000628906 RPS8P62241 208 aaKnown RBP8.12□□□□□ -1.11
LINC00649-220ENST00000628906 TFF2Q03403 129 aa8.12□□□□□ -1.11
LINC00649-220ENST00000628906 ADGRE1Q14246 886 aa8.12□□□□□ -1.11
LINC00649-220ENST00000628906 SF3B3Q15393 1217 aaKnown RBP8.12□□□□□ -1.11
LINC00649-220ENST00000628906 CCDC85BQ15834 202 aaPredicted RBP8.12□□□□□ -1.11
LINC00649-220ENST00000628906 SPDYE2Q495Y8 402 aa8.12□□□□□ -1.11
LINC00649-220ENST00000628906 CDCA8Q53HL2 280 aa8.12□□□□□ -1.11
LINC00649-220ENST00000628906 ANKRD23Q86SG2 305 aa8.12□□□□□ -1.11
LINC00649-220ENST00000628906 PHOX2BQ99453 314 aa8.12□□□□□ -1.11
LINC00649-220ENST00000628906 TSPYL2Q9H2G4 693 aaPredicted RBP8.12□□□□□ -1.11
LINC00649-220ENST00000628906 HMX1Q9NP08 348 aaPredicted RBP8.12□□□□□ -1.11
LINC00649-220ENST00000628906 GGA1Q9UJY5 639 aa8.12□□□□□ -1.11
LINC00649-220ENST00000628906 RIF1Q5UIP0 2472 aaKnown RBP8.12□□□□□ -1.11
LINC00649-220ENST00000628906 CHD7Q9P2D1 2997 aa8.12□□□□□ -1.11
LINC00649-220ENST00000628906 TLL1O43897 1013 aa8.11□□□□□ -1.11
LINC00649-220ENST00000628906 KCNQ1P51787 676 aa8.11□□□□□ -1.11
LINC00649-220ENST00000628906 KCTD2Q14681 263 aa8.11□□□□□ -1.11
LINC00649-220ENST00000628906 ERO1BQ86YB8 467 aa8.11□□□□□ -1.11
LINC00649-220ENST00000628906 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.11□□□□□ -1.11
LINC00649-220ENST00000628906 SIN3AQ96ST3 1273 aa8.11□□□□□ -1.11
LINC00649-220ENST00000628906 ZNF318Q5VUA4 2279 aa8.11□□□□□ -1.11
LINC00649-220ENST00000628906 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.1□□□□□ -1.11
LINC00649-220ENST00000628906 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.1□□□□□ -1.11
LINC00649-220ENST00000628906 PDHXO00330 501 aa8.1□□□□□ -1.11
LINC00649-220ENST00000628906 ERC2O15083 957 aa8.1□□□□□ -1.11
LINC00649-220ENST00000628906 RASA3Q14644 834 aa8.1□□□□□ -1.11
LINC00649-220ENST00000628906 DLGAP5Q15398 846 aa8.1□□□□□ -1.11
LINC00649-220ENST00000628906 NLRP10Q86W26 655 aa8.1□□□□□ -1.11
LINC00649-220ENST00000628906 ANKIB1Q9P2G1 1089 aa8.1□□□□□ -1.11
LINC00649-220ENST00000628906 PRKAG2Q9UGJ0 569 aa8.1□□□□□ -1.11
LINC00649-220ENST00000628906 RRP7AQ9Y3A4 280 aaKnown RBP8.1□□□□□ -1.11
LINC00649-220ENST00000628906 CSADQ9Y600 493 aa8.1□□□□□ -1.11
LINC00649-220ENST00000628906 MGAMO43451 1857 aa8.1□□□□□ -1.11
LINC00649-220ENST00000628906 SETXQ7Z333 2677 aaKnown RBP8.1□□□□□ -1.11
LINC00649-220ENST00000628906 DOCK3Q8IZD9 2030 aa8.1□□□□□ -1.11
LINC00649-220ENST00000628906 OTOFQ9HC10 1997 aa8.1□□□□□ -1.11
LINC00649-220ENST00000628906 FASNP49327 2511 aaKnown RBP8.09□□□□□ -1.11
LINC00649-220ENST00000628906 SH3TC1Q8TE82 1336 aa8.09□□□□□ -1.11
LINC00649-220ENST00000628906 HMGCRP04035 888 aa8.09□□□□□ -1.11
LINC00649-220ENST00000628906 PPIL2Q13356 520 aa8.09□□□□□ -1.11
LINC00649-220ENST00000628906 RIC3Q7Z5B4 369 aa8.09□□□□□ -1.11
LINC00649-220ENST00000628906 KIAA0825Q8IV33 1275 aa8.09□□□□□ -1.11
LINC00649-220ENST00000628906 GAS2L2Q8NHY3 880 aa8.09□□□□□ -1.11
LINC00649-220ENST00000628906 PRDM12Q9H4Q4 367 aa8.09□□□□□ -1.11
LINC00649-220ENST00000628906 TRMT112Q9UI30 125 aaKnown RBP8.09□□□□□ -1.11
LINC00649-220ENST00000628906 ACACBO00763 2458 aa8.08□□□□□ -1.12
LINC00649-220ENST00000628906 TNPO2O14787 897 aaKnown RBP8.08□□□□□ -1.12
LINC00649-220ENST00000628906 TIFAQ96CG3 184 aa8.08□□□□□ -1.12
LINC00649-220ENST00000628906 TEPSINQ96N21 525 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms