RNA–Protein interactions for RNA: ENST00000628734.1

UBE2A-208, Transcript of ubiquitin conjugating enzyme E2 A, human

TSL 2

Gene UBE2A, Length 600 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE2A-208	ENST00000628734	HHIP	Q96QV1	700 aa		6.65	□□□□□ -1.34
UBE2A-208	ENST00000628734	SLC38A3	Q99624	504 aa		6.65	□□□□□ -1.34
UBE2A-208	ENST00000628734	CHRD	Q9H2X0	955 aa		6.65	□□□□□ -1.34
UBE2A-208	ENST00000628734	FAM177B	A6PVY3	158 aa		6.64	□□□□□ -1.35
UBE2A-208	ENST00000628734	TIAF1	O95411	115 aa		6.64	□□□□□ -1.35
UBE2A-208	ENST00000628734	DRD2	P14416	443 aa		6.64	□□□□□ -1.35
UBE2A-208	ENST00000628734	PCSK2	P16519	638 aa		6.64	□□□□□ -1.35
UBE2A-208	ENST00000628734	DNM1	Q05193	864 aa	Known RBP	6.64	□□□□□ -1.35
UBE2A-208	ENST00000628734	SPRED2	Q7Z698	418 aa		6.64	□□□□□ -1.35
UBE2A-208	ENST00000628734	GTF3C2	Q8WUA4	911 aa	Predicted RBP	6.64	□□□□□ -1.35
UBE2A-208	ENST00000628734	DZANK1	Q9NVP4	752 aa		6.64	□□□□□ -1.35
UBE2A-208	ENST00000628734	PRKAG2	Q9UGJ0	569 aa		6.64	□□□□□ -1.35
UBE2A-208	ENST00000628734	GTF3C3	Q9Y5Q9	886 aa		6.64	□□□□□ -1.35
UBE2A-208	ENST00000628734	USP11	P51784	963 aa		6.63	□□□□□ -1.35
UBE2A-208	ENST00000628734	MESP2	Q0VG99	397 aa		6.63	□□□□□ -1.35
UBE2A-208	ENST00000628734	ALKBH2	Q6NS38	261 aa		6.63	□□□□□ -1.35
UBE2A-208	ENST00000628734	GATA6	Q92908	595 aa		6.63	□□□□□ -1.35
UBE2A-208	ENST00000628734	C1orf115	Q9H7X2	142 aa		6.63	□□□□□ -1.35
UBE2A-208	ENST00000628734	OSGEP	Q9NPF4	335 aa		6.63	□□□□□ -1.35
UBE2A-208	ENST00000628734	SLC5A6	Q9Y289	635 aa		6.63	□□□□□ -1.35
UBE2A-208	ENST00000628734	CES1	P23141	567 aa		6.62	□□□□□ -1.35
UBE2A-208	ENST00000628734	CABP4	P57796	275 aa		6.62	□□□□□ -1.35
UBE2A-208	ENST00000628734	PHLDB3	Q6NSJ2	640 aa		6.62	□□□□□ -1.35
UBE2A-208	ENST00000628734	LCNL1	Q6ZST4	164 aa		6.62	□□□□□ -1.35
UBE2A-208	ENST00000628734	ATG4D	Q86TL0	474 aa	Predicted RBP	6.62	□□□□□ -1.35
UBE2A-208	ENST00000628734	GLIS3	Q8NEA6	775 aa		6.62	□□□□□ -1.35
UBE2A-208	ENST00000628734	PMEPA1	Q969W9	287 aa		6.62	□□□□□ -1.35
UBE2A-208	ENST00000628734	TMPRSS13	Q9BYE2	586 aa		6.62	□□□□□ -1.35
UBE2A-208	ENST00000628734	CFP	P27918	469 aa		6.61	□□□□□ -1.35
UBE2A-208	ENST00000628734	MTMR3	Q13615	1198 aa		6.61	□□□□□ -1.35
UBE2A-208	ENST00000628734	ZNF765	Q7L2R6	523 aa		6.61	□□□□□ -1.35
UBE2A-208	ENST00000628734	TMEM102	Q8N9M5	508 aa	Predicted RBP	6.61	□□□□□ -1.35
UBE2A-208	ENST00000628734	SMG8	Q8ND04	991 aa	Known RBP	6.61	□□□□□ -1.35
UBE2A-208	ENST00000628734	TMEM40	Q8WWA1	233 aa		6.61	□□□□□ -1.35
UBE2A-208	ENST00000628734	SOX13	Q9UN79	622 aa		6.61	□□□□□ -1.35
UBE2A-208	ENST00000628734	POLI	Q9UNA4	740 aa		6.61	□□□□□ -1.35
UBE2A-208	ENST00000628734	PDE2A	O00408	941 aa	Predicted RBP	6.6	□□□□□ -1.35
UBE2A-208	ENST00000628734	DLGAP3	O95886	979 aa		6.6	□□□□□ -1.35
UBE2A-208	ENST00000628734	BNIP3	Q12983	259 aa		6.6	□□□□□ -1.35
UBE2A-208	ENST00000628734	C8orf34	Q49A92	452 aa		6.6	□□□□□ -1.35
UBE2A-208	ENST00000628734	DUSP27	Q5VZP5	1158 aa		6.6	□□□□□ -1.35
UBE2A-208	ENST00000628734	RC3H2	Q9HBD1	1191 aa	Known RBP	6.6	□□□□□ -1.35
UBE2A-208	ENST00000628734	TNFRSF21	O75509	655 aa		6.59	□□□□□ -1.35
UBE2A-208	ENST00000628734	FAM13A	O94988	1023 aa		6.59	□□□□□ -1.35
UBE2A-208	ENST00000628734	USP5	P45974	858 aa		6.59	□□□□□ -1.35
UBE2A-208	ENST00000628734	EHHADH	Q08426	723 aa		6.59	□□□□□ -1.35
UBE2A-208	ENST00000628734	SF3B2	Q13435	895 aa	Known RBP	6.59	□□□□□ -1.35
UBE2A-208	ENST00000628734	C1QL4	Q86Z23	238 aa		6.59	□□□□□ -1.35
UBE2A-208	ENST00000628734	C2CD4A	Q8NCU7	369 aa	Predicted RBP	6.59	□□□□□ -1.35
UBE2A-208	ENST00000628734	SNX29	Q8TEQ0	813 aa		6.59	□□□□□ -1.35
UBE2A-208	ENST00000628734	NXPE3	Q969Y0	559 aa		6.59	□□□□□ -1.35
UBE2A-208	ENST00000628734	USP26	Q9BXU7	913 aa		6.59	□□□□□ -1.35
UBE2A-208	ENST00000628734	SUGCT	Q9HAC7	445 aa		6.59	□□□□□ -1.35
UBE2A-208	ENST00000628734	CYP4F12	Q9HCS2	524 aa		6.59	□□□□□ -1.35
UBE2A-208	ENST00000628734	SOX1	O00570	391 aa	Predicted RBP	6.58	□□□□□ -1.36
UBE2A-208	ENST00000628734	EREG	O14944	169 aa		6.58	□□□□□ -1.36
UBE2A-208	ENST00000628734	FZD6	O60353	706 aa		6.58	□□□□□ -1.36
UBE2A-208	ENST00000628734	RNASE1	P07998	156 aa	Known RBP	6.58	□□□□□ -1.36
UBE2A-208	ENST00000628734	C19orf57	Q0VDD7	668 aa		6.58	□□□□□ -1.36
UBE2A-208	ENST00000628734	VN1R5	Q7Z5H4	357 aa		6.58	□□□□□ -1.36
UBE2A-208	ENST00000628734	GJD3	Q8N144	294 aa		6.58	□□□□□ -1.36
UBE2A-208	ENST00000628734	TTC16	Q8NEE8	873 aa		6.58	□□□□□ -1.36
UBE2A-208	ENST00000628734	FAM84A	Q96KN4	292 aa		6.58	□□□□□ -1.36
UBE2A-208	ENST00000628734	ZKSCAN3	Q9BRR0	538 aa		6.58	□□□□□ -1.36
UBE2A-208	ENST00000628734	ADAMTS6	Q9UKP5	1117 aa		6.58	□□□□□ -1.36
UBE2A-208	ENST00000628734	MTMR7	Q9Y216	660 aa		6.58	□□□□□ -1.36
UBE2A-208	ENST00000628734	LOC100289279	A0A1B0GTE1	492 aa		6.57	□□□□□ -1.36
UBE2A-208	ENST00000628734	CARNS1	A5YM72	827 aa		6.57	□□□□□ -1.36
UBE2A-208	ENST00000628734	EDN3	P14138	238 aa		6.57	□□□□□ -1.36
UBE2A-208	ENST00000628734	EZH1	Q92800	747 aa	Predicted RBP	6.57	□□□□□ -1.36
UBE2A-208	ENST00000628734	TOX2	Q96NM4	488 aa		6.57	□□□□□ -1.36
UBE2A-208	ENST00000628734	BHLHE41	Q9C0J9	482 aa	Predicted RBP	6.57	□□□□□ -1.36
UBE2A-208	ENST00000628734	MBNL3	Q9NUK0	354 aa	Known RBP	6.57	□□□□□ -1.36
UBE2A-208	ENST00000628734	FAM120A	Q9NZB2	1118 aa	Known RBP eCLIP	6.57	□□□□□ -1.36
UBE2A-208	ENST00000628734	LMCD1	Q9NZU5	365 aa		6.57	□□□□□ -1.36
UBE2A-208	ENST00000628734	LRRC10B	A6NIK2	292 aa		6.56	□□□□□ -1.36
UBE2A-208	ENST00000628734	PHACTR2	O75167	634 aa		6.56	□□□□□ -1.36
UBE2A-208	ENST00000628734	FKBP4	Q02790	459 aa	Known RBP eCLIP	6.56	□□□□□ -1.36
UBE2A-208	ENST00000628734	PEAR1	Q5VY43	1037 aa	Predicted RBP	6.56	□□□□□ -1.36
UBE2A-208	ENST00000628734	LRRC56	Q8IYG6	542 aa	Predicted RBP	6.56	□□□□□ -1.36
UBE2A-208	ENST00000628734	BSND	Q8WZ55	320 aa		6.56	□□□□□ -1.36
UBE2A-208	ENST00000628734	OSMR	Q99650	979 aa		6.56	□□□□□ -1.36
UBE2A-208	ENST00000628734	FOXD3	Q9UJU5	478 aa	Predicted RBP	6.56	□□□□□ -1.36
UBE2A-208	ENST00000628734	NFIC	P08651	508 aa		6.55	□□□□□ -1.36
UBE2A-208	ENST00000628734	RAP1GAP	P47736	663 aa		6.55	□□□□□ -1.36
UBE2A-208	ENST00000628734	ARL4D	P49703	201 aa		6.55	□□□□□ -1.36
UBE2A-208	ENST00000628734	ECM1	Q16610	540 aa		6.55	□□□□□ -1.36
UBE2A-208	ENST00000628734	LRRN4CL	Q8ND94	238 aa		6.55	□□□□□ -1.36
UBE2A-208	ENST00000628734	SOX17	Q9H6I2	414 aa	Predicted RBP	6.55	□□□□□ -1.36
UBE2A-208	ENST00000628734	LATS2	Q9NRM7	1088 aa		6.55	□□□□□ -1.36
UBE2A-208	ENST00000628734	EGFL7	Q9UHF1	273 aa		6.55	□□□□□ -1.36
UBE2A-208	ENST00000628734	JAG2	Q9Y219	1238 aa		6.55	□□□□□ -1.36
UBE2A-208	ENST00000628734	UST	Q9Y2C2	406 aa		6.55	□□□□□ -1.36
UBE2A-208	ENST00000628734	ZSCAN22	P10073	491 aa	Predicted RBP	6.54	□□□□□ -1.36
UBE2A-208	ENST00000628734	CD8B	P10966	210 aa		6.54	□□□□□ -1.36
UBE2A-208	ENST00000628734	RAB6A	P20340	208 aa		6.54	□□□□□ -1.36
UBE2A-208	ENST00000628734	FUT4	P22083	530 aa		6.54	□□□□□ -1.36
UBE2A-208	ENST00000628734	SOX4	Q06945	474 aa	Predicted RBP	6.54	□□□□□ -1.36
UBE2A-208	ENST00000628734	TTLL10	Q6ZVT0	673 aa		6.54	□□□□□ -1.36
UBE2A-208	ENST00000628734	STK11IP	Q8N1F8	1099 aa		6.54	□□□□□ -1.36

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