RNA–Protein interactions for RNA: ENST00000628509.1

FOXCUT-201, FOXC1 upstream transcript, humanhuman

TSL 3 BASIC

Gene FOXCUT, Length 333 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXCUT-201ENST00000628509 POLLQ9UGP5 575 aa12.13□□□□□ -0.47
FOXCUT-201ENST00000628509 DOCK2Q92608 1830 aa12.13□□□□□ -0.47
FOXCUT-201ENST00000628509 FAM205AQ6ZU69 1335 aa12.12□□□□□ -0.47
FOXCUT-201ENST00000628509 MYO3BQ8WXR4 1341 aa12.12□□□□□ -0.47
FOXCUT-201ENST00000628509 C21orf2O43822 256 aa12.12□□□□□ -0.47
FOXCUT-201ENST00000628509 HMGB1P09429 215 aaKnown RBP12.12□□□□□ -0.47
FOXCUT-201ENST00000628509 PDE6AP16499 860 aa12.12□□□□□ -0.47
FOXCUT-201ENST00000628509 NT5C2P49902 561 aa12.12□□□□□ -0.47
FOXCUT-201ENST00000628509 KIAA2012Q0VF49 1180 aa12.12□□□□□ -0.47
FOXCUT-201ENST00000628509 MAGEB6Q8N7X4 407 aa12.12□□□□□ -0.47
FOXCUT-201ENST00000628509 EDC3Q96F86 508 aaKnown RBP12.12□□□□□ -0.47
FOXCUT-201ENST00000628509 ANTXR1Q9H6X2 564 aa12.12□□□□□ -0.47
FOXCUT-201ENST00000628509 ZNF532Q9HCE3 1301 aa12.11□□□□□ -0.47
FOXCUT-201ENST00000628509 LTBP1Q14766 1721 aa12.11□□□□□ -0.47
FOXCUT-201ENST00000628509 SLX4Q8IY92 1834 aa12.11□□□□□ -0.47
FOXCUT-201ENST00000628509 MAST2Q6P0Q8 1798 aa12.11□□□□□ -0.47
FOXCUT-201ENST00000628509 A0A0D9SFI3 127 aa12.11□□□□□ -0.47
FOXCUT-201ENST00000628509 MAGEB6P1A0A0J9YX57 407 aa12.11□□□□□ -0.47
FOXCUT-201ENST00000628509 SNAP23O00161 211 aa12.11□□□□□ -0.47
FOXCUT-201ENST00000628509 RIMBP2O15034 1052 aa12.11□□□□□ -0.47
FOXCUT-201ENST00000628509 PPIP5K2O43314 1243 aa12.11□□□□□ -0.47
FOXCUT-201ENST00000628509 SEC24BO95487 1268 aa12.11□□□□□ -0.47
FOXCUT-201ENST00000628509 CYP7A1P22680 504 aa12.11□□□□□ -0.47
FOXCUT-201ENST00000628509 HSPA4P34932 840 aa12.11□□□□□ -0.47
FOXCUT-201ENST00000628509 IMMTQ16891 758 aaKnown RBP12.11□□□□□ -0.47
FOXCUT-201ENST00000628509 HSCBQ8IWL3 235 aa12.11□□□□□ -0.47
FOXCUT-201ENST00000628509 C7orf43Q8WVR3 580 aa12.11□□□□□ -0.47
FOXCUT-201ENST00000628509 JDP2Q8WYK2 163 aa12.11□□□□□ -0.47
FOXCUT-201ENST00000628509 MAP4K1Q92918 833 aa12.11□□□□□ -0.47
FOXCUT-201ENST00000628509 CHMP4CQ96CF2 233 aa12.11□□□□□ -0.47
FOXCUT-201ENST00000628509 FAM227BQ96M60 508 aa12.11□□□□□ -0.47
FOXCUT-201ENST00000628509 SGIP1Q9BQI5 828 aa12.11□□□□□ -0.47
FOXCUT-201ENST00000628509 TAOK3Q9H2K8 898 aa12.11□□□□□ -0.47
FOXCUT-201ENST00000628509 PIH1D3Q9NQM4 214 aaKnown RBP12.11□□□□□ -0.47
FOXCUT-201ENST00000628509 IQSEC3Q9UPP2 1182 aaPredicted RBP12.11□□□□□ -0.47
FOXCUT-201ENST00000628509 IRS2Q9Y4H2 1338 aa12.11□□□□□ -0.47
FOXCUT-201ENST00000628509 APPP05067 770 aa12.1□□□□□ -0.47
FOXCUT-201ENST00000628509 PRR29P0C7W0 189 aa12.1□□□□□ -0.47
FOXCUT-201ENST00000628509 MFSD14BQ5SR56 506 aa12.1□□□□□ -0.47
FOXCUT-201ENST00000628509 STRIP1Q5VSL9 837 aa12.1□□□□□ -0.47
FOXCUT-201ENST00000628509 TTLL5Q6EMB2 1281 aa12.1□□□□□ -0.47
FOXCUT-201ENST00000628509 PI16Q6UXB8 463 aa12.1□□□□□ -0.47
FOXCUT-201ENST00000628509 NIM1KQ8IY84 436 aa12.1□□□□□ -0.47
FOXCUT-201ENST00000628509 LARGE2Q8N3Y3 721 aa12.1□□□□□ -0.47
FOXCUT-201ENST00000628509 CRNKL1Q9BZJ0 848 aaKnown RBP12.1□□□□□ -0.47
FOXCUT-201ENST00000628509 LSG1Q9H089 658 aaKnown RBP12.1□□□□□ -0.47
FOXCUT-201ENST00000628509 NDUFB9Q9Y6M9 179 aa12.1□□□□□ -0.47
FOXCUT-201ENST00000628509 ZMYM6O95789 1325 aa12.1□□□□□ -0.47
FOXCUT-201ENST00000628509 LTBP3Q9NS15 1303 aa12.1□□□□□ -0.47
FOXCUT-201ENST00000628509 USP17L3A6NCW0 530 aa12.09□□□□□ -0.47
FOXCUT-201ENST00000628509 USP17L4A6NCW7 530 aa12.09□□□□□ -0.47
FOXCUT-201ENST00000628509 GPAA1O43292 621 aa12.09□□□□□ -0.47
FOXCUT-201ENST00000628509 SLC3A2P08195 630 aaKnown RBP12.09□□□□□ -0.47
FOXCUT-201ENST00000628509 PTGER2P43116 358 aa12.09□□□□□ -0.47
FOXCUT-201ENST00000628509 TRDNQ13061 729 aa12.09□□□□□ -0.47
FOXCUT-201ENST00000628509 GIMAP6Q6P9H5 292 aa12.09□□□□□ -0.47
FOXCUT-201ENST00000628509 USP17L1Q7RTZ2 530 aa12.09□□□□□ -0.47
FOXCUT-201ENST00000628509 FBXW7Q969H0 707 aa12.09□□□□□ -0.47
FOXCUT-201ENST00000628509 HDAC9Q9UKV0 1011 aa12.09□□□□□ -0.47
FOXCUT-201ENST00000628509 BCS1LQ9Y276 419 aa12.09□□□□□ -0.47
FOXCUT-201ENST00000628509 RBM8AQ9Y5S9 174 aaKnown RBP12.09□□□□□ -0.47
FOXCUT-201ENST00000628509 COL4A1P02462 1669 aa12.09□□□□□ -0.47
FOXCUT-201ENST00000628509 PATL2C9JE40 543 aaKnown RBP12.08□□□□□ -0.48
FOXCUT-201ENST00000628509 ECE2O60344 883 aa12.08□□□□□ -0.48
FOXCUT-201ENST00000628509 HSPD1P10809 573 aaKnown RBP12.08□□□□□ -0.48
FOXCUT-201ENST00000628509 PCP11498 1178 aaKnown RBP12.08□□□□□ -0.48
FOXCUT-201ENST00000628509 KCNA3P22001 575 aa12.08□□□□□ -0.48
FOXCUT-201ENST00000628509 KLRK1P26718 216 aa12.08□□□□□ -0.48
FOXCUT-201ENST00000628509 GTF2IP78347 998 aa12.08□□□□□ -0.48
FOXCUT-201ENST00000628509 HDLBPQ00341 1268 aaKnown RBP12.08□□□□□ -0.48
FOXCUT-201ENST00000628509 TNIP1Q15025 636 aa12.08□□□□□ -0.48
FOXCUT-201ENST00000628509 ANKRD1Q15327 319 aa12.08□□□□□ -0.48
FOXCUT-201ENST00000628509 CHADLQ6NUI6 762 aa12.08□□□□□ -0.48
FOXCUT-201ENST00000628509 TXNRD3Q86VQ6 643 aa12.08□□□□□ -0.48
FOXCUT-201ENST00000628509 NSUN4Q96CB9 384 aaKnown RBP12.08□□□□□ -0.48
FOXCUT-201ENST00000628509 IPO9Q96P70 1041 aaKnown RBP12.08□□□□□ -0.48
FOXCUT-201ENST00000628509 MRIQ9BWK5 157 aa12.08□□□□□ -0.48
FOXCUT-201ENST00000628509 TM6SF1Q9BZW5 370 aa12.08□□□□□ -0.48
FOXCUT-201ENST00000628509 NAPBQ9H115 298 aa12.08□□□□□ -0.48
FOXCUT-201ENST00000628509 ZNF287Q9HBT7 754 aa12.08□□□□□ -0.48
FOXCUT-201ENST00000628509 KIAA1551Q9HCM1 1747 aa12.08□□□□□ -0.48
FOXCUT-201ENST00000628509 CHD4Q14839 1912 aa12.07□□□□□ -0.48
FOXCUT-201ENST00000628509 TCRBV5S4A2TA0A5A2 114 aa12.07□□□□□ -0.48
FOXCUT-201ENST00000628509 ZNF213O14771 459 aa12.07□□□□□ -0.48
FOXCUT-201ENST00000628509 MBD4O95243 580 aa12.07□□□□□ -0.48
FOXCUT-201ENST00000628509 IARSP41252 1262 aaKnown RBP12.07□□□□□ -0.48
FOXCUT-201ENST00000628509 MECOMQ03112 1051 aa12.07□□□□□ -0.48
FOXCUT-201ENST00000628509 ALX1Q15699 326 aa12.07□□□□□ -0.48
FOXCUT-201ENST00000628509 TSGA10IPQ3SY00 556 aa12.07□□□□□ -0.48
FOXCUT-201ENST00000628509 OGFOD1Q8N543 542 aa12.07□□□□□ -0.48
FOXCUT-201ENST00000628509 OSBP2Q969R2 916 aa12.07□□□□□ -0.48
FOXCUT-201ENST00000628509 IL17RAQ96F46 866 aa12.07□□□□□ -0.48
FOXCUT-201ENST00000628509 FAM163AQ96GL9 167 aaPredicted RBP12.07□□□□□ -0.48
FOXCUT-201ENST00000628509 RNF41Q9H4P4 317 aaPredicted RBP12.07□□□□□ -0.48
FOXCUT-201ENST00000628509 ATP8A2Q9NTI2 1148 aa12.07□□□□□ -0.48
FOXCUT-201ENST00000628509 TAOK2Q9UL54 1235 aa12.07□□□□□ -0.48
FOXCUT-201ENST00000628509 WWC3Q9ULE0 1092 aa12.07□□□□□ -0.48
FOXCUT-201ENST00000628509 CYP46A1Q9Y6A2 500 aa12.07□□□□□ -0.48
FOXCUT-201ENST00000628509 HSP90AA1P07900 732 aaKnown RBP12.06□□□□□ -0.48
FOXCUT-201ENST00000628509 TDO2P48775 406 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms