RNA–Protein interactions for RNA: ENST00000628343.2

SOX2-OT-246, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 746 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-246ENST00000628343 CRKP46108 304 aa16.67■□□□□ 0.26
SOX2-OT-246ENST00000628343 RBM5P52756 815 aaKnown RBP eCLIP16.67■□□□□ 0.26
SOX2-OT-246ENST00000628343 TTC39AQ5SRH9 613 aa16.67■□□□□ 0.26
SOX2-OT-246ENST00000628343 SULF1Q8IWU6 871 aa16.67■□□□□ 0.26
SOX2-OT-246ENST00000628343 SPATA5Q8NB90 893 aa16.67■□□□□ 0.26
SOX2-OT-246ENST00000628343 DCTPP1Q9H773 170 aa16.67■□□□□ 0.26
SOX2-OT-246ENST00000628343 HDLBPQ00341 1268 aaKnown RBP16.66■□□□□ 0.26
SOX2-OT-246ENST00000628343 CCDC158Q5M9N0 1113 aa16.66■□□□□ 0.26
SOX2-OT-246ENST00000628343 CST9Q5W186 159 aa16.66■□□□□ 0.26
SOX2-OT-246ENST00000628343 CLASRPQ8N2M8 674 aaKnown RBP16.66■□□□□ 0.26
SOX2-OT-246ENST00000628343 ZNF512BQ96KM6 892 aaPredicted RBP16.66■□□□□ 0.26
SOX2-OT-246ENST00000628343 CREBZFQ9NS37 354 aa16.66■□□□□ 0.26
SOX2-OT-246ENST00000628343 MAST3O60307 1309 aa16.66■□□□□ 0.26
SOX2-OT-246ENST00000628343 CLRN2A0PK11 232 aa16.65■□□□□ 0.26
SOX2-OT-246ENST00000628343 TMEM88BA6NKF7 163 aa16.65■□□□□ 0.26
SOX2-OT-246ENST00000628343 LDHBP07195 334 aaKnown RBP16.65■□□□□ 0.26
SOX2-OT-246ENST00000628343 IRX6P78412 446 aaPredicted RBP16.65■□□□□ 0.26
SOX2-OT-246ENST00000628343 DIXDC1Q155Q3 683 aa16.65■□□□□ 0.26
SOX2-OT-246ENST00000628343 ZGPATQ8N5A5 531 aaKnown RBP16.65■□□□□ 0.26
SOX2-OT-246ENST00000628343 TEKT1Q969V4 418 aa16.65■□□□□ 0.26
SOX2-OT-246ENST00000628343 MRIQ9BWK5 157 aa16.65■□□□□ 0.26
SOX2-OT-246ENST00000628343 LRRCC1Q9C099 1032 aa16.65■□□□□ 0.26
SOX2-OT-246ENST00000628343 BCL11AQ9H165 835 aa16.65■□□□□ 0.26
SOX2-OT-246ENST00000628343 SNRKQ9NRH2 765 aa16.65■□□□□ 0.26
SOX2-OT-246ENST00000628343 ABCF2Q9UG63 623 aa16.65■□□□□ 0.26
SOX2-OT-246ENST00000628343 SMARCA5O60264 1052 aaPredicted RBP16.64■□□□□ 0.25
SOX2-OT-246ENST00000628343 CELF2O95319 508 aaKnown RBP16.64■□□□□ 0.25
SOX2-OT-246ENST00000628343 AAMPQ13685 434 aa16.64■□□□□ 0.25
SOX2-OT-246ENST00000628343 TBC1D9Q6ZT07 1266 aa16.64■□□□□ 0.25
SOX2-OT-246ENST00000628343 ZDHHC15Q96MV8 337 aa16.64■□□□□ 0.25
SOX2-OT-246ENST00000628343 ZNF408Q9H9D4 720 aa16.64■□□□□ 0.25
SOX2-OT-246ENST00000628343 MYO1BO43795 1136 aa16.63■□□□□ 0.25
SOX2-OT-246ENST00000628343 IFIT2P09913 472 aaKnown RBP16.63■□□□□ 0.25
SOX2-OT-246ENST00000628343 SPDYE2Q495Y8 402 aa16.63■□□□□ 0.25
SOX2-OT-246ENST00000628343 APOBEC3HQ6NTF7 200 aaKnown RBP16.63■□□□□ 0.25
SOX2-OT-246ENST00000628343 HHIPL2Q6UWX4 724 aa16.63■□□□□ 0.25
SOX2-OT-246ENST00000628343 APOBEC3FQ8IUX4 373 aaKnown RBP16.63■□□□□ 0.25
SOX2-OT-246ENST00000628343 CDCA5Q96FF9 252 aa16.63■□□□□ 0.25
SOX2-OT-246ENST00000628343 TDRD3Q9H7E2 651 aaKnown RBP16.63■□□□□ 0.25
SOX2-OT-246ENST00000628343 DAGLAQ9Y4D2 1042 aa16.63■□□□□ 0.25
SOX2-OT-246ENST00000628343 CYP2E1P05181 493 aaPredicted RBP16.62■□□□□ 0.25
SOX2-OT-246ENST00000628343 ZAP70P43403 619 aa16.62■□□□□ 0.25
SOX2-OT-246ENST00000628343 HDAC1Q13547 482 aaPredicted RBP16.62■□□□□ 0.25
SOX2-OT-246ENST00000628343 PRAMEF18Q5VWM3 479 aa16.62■□□□□ 0.25
SOX2-OT-246ENST00000628343 DNAJC5GQ8N7S2 189 aa16.62■□□□□ 0.25
SOX2-OT-246ENST00000628343 ZNF384Q8TF68 577 aa16.62■□□□□ 0.25
SOX2-OT-246ENST00000628343 VEZTQ9HBM0 779 aa16.62■□□□□ 0.25
SOX2-OT-246ENST00000628343 ZNF70Q9UC06 446 aaPredicted RBP16.62■□□□□ 0.25
SOX2-OT-246ENST00000628343 NDUFB9Q9Y6M9 179 aa16.62■□□□□ 0.25
SOX2-OT-246ENST00000628343 MYH13Q9UKX3 1938 aa16.62■□□□□ 0.25
SOX2-OT-246ENST00000628343 MECOMQ03112 1051 aa16.61■□□□□ 0.25
SOX2-OT-246ENST00000628343 SPTY2D1Q68D10 685 aaPredicted RBP16.61■□□□□ 0.25
SOX2-OT-246ENST00000628343 DZIP1Q86YF9 867 aaKnown RBP16.61■□□□□ 0.25
SOX2-OT-246ENST00000628343 ERICH6Q7L0X2 663 aa16.6■□□□□ 0.25
SOX2-OT-246ENST00000628343 DEFB129Q9H1M3 183 aa16.6■□□□□ 0.25
SOX2-OT-246ENST00000628343 PIH1D3Q9NQM4 214 aaKnown RBP16.6■□□□□ 0.25
SOX2-OT-246ENST00000628343 ABT1Q9ULW3 272 aaKnown RBP16.6■□□□□ 0.25
SOX2-OT-246ENST00000628343 GAKO14976 1311 aa16.6■□□□□ 0.25
SOX2-OT-246ENST00000628343 CACNB3P54284 484 aa16.59■□□□□ 0.25
SOX2-OT-246ENST00000628343 NSUN4Q96CB9 384 aaKnown RBP16.59■□□□□ 0.25
SOX2-OT-246ENST00000628343 RAI14Q9P0K7 980 aa16.59■□□□□ 0.25
SOX2-OT-246ENST00000628343 TLL2Q9Y6L7 1015 aa16.59■□□□□ 0.25
SOX2-OT-246ENST00000628343 RASSF10A6NK89 507 aa16.58■□□□□ 0.24
SOX2-OT-246ENST00000628343 TCP10L2B9ZVM9 353 aa16.58■□□□□ 0.24
SOX2-OT-246ENST00000628343 RASA3Q14644 834 aa16.58■□□□□ 0.24
SOX2-OT-246ENST00000628343 SAPCD2Q86UD0 394 aa16.58■□□□□ 0.24
SOX2-OT-246ENST00000628343 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.58■□□□□ 0.24
SOX2-OT-246ENST00000628343 FAM163AQ96GL9 167 aaPredicted RBP16.58■□□□□ 0.24
SOX2-OT-246ENST00000628343 ANTXR1Q9H6X2 564 aa16.58■□□□□ 0.24
SOX2-OT-246ENST00000628343 GBA2Q9HCG7 927 aaPredicted RBP16.58■□□□□ 0.24
SOX2-OT-246ENST00000628343 LRP2BPQ9P2M1 347 aa16.58■□□□□ 0.24
SOX2-OT-246ENST00000628343 MKRN1Q9UHC7 482 aaKnown RBP16.58■□□□□ 0.24
SOX2-OT-246ENST00000628343 PPP2R3BQ9Y5P8 575 aa16.58■□□□□ 0.24
SOX2-OT-246ENST00000628343 MROH7-TTC4A0A0A0MT08 1334 aa16.58■□□□□ 0.24
SOX2-OT-246ENST00000628343 CNTNAP1P78357 1384 aa16.58■□□□□ 0.24
SOX2-OT-246ENST00000628343 SSC5DA1L4H1 1573 aa16.57■□□□□ 0.24
SOX2-OT-246ENST00000628343 IGHDP01880 384 aa16.57■□□□□ 0.24
SOX2-OT-246ENST00000628343 TNFAIP1Q13829 316 aa16.57■□□□□ 0.24
SOX2-OT-246ENST00000628343 CDC42EP5Q6NZY7 148 aa16.57■□□□□ 0.24
SOX2-OT-246ENST00000628343 KLRG1Q96E93 195 aa16.57■□□□□ 0.24
SOX2-OT-246ENST00000628343 AKAP11Q9UKA4 1901 aa16.57■□□□□ 0.24
SOX2-OT-246ENST00000628343 CEP350Q5VT06 3117 aa16.56■□□□□ 0.24
SOX2-OT-246ENST00000628343 ATP5JP18859 108 aa16.56■□□□□ 0.24
SOX2-OT-246ENST00000628343 CDAN1Q8IWY9 1227 aa16.56■□□□□ 0.24
SOX2-OT-246ENST00000628343 SLF2Q8IX21 1173 aa16.56■□□□□ 0.24
SOX2-OT-246ENST00000628343 C2orf69Q8N8R5 385 aa16.56■□□□□ 0.24
SOX2-OT-246ENST00000628343 GCC1Q96CN9 775 aa16.56■□□□□ 0.24
SOX2-OT-246ENST00000628343 TMEM39BQ9GZU3 492 aa16.56■□□□□ 0.24
SOX2-OT-246ENST00000628343 ECM29Q5VYK3 1845 aa16.56■□□□□ 0.24
SOX2-OT-246ENST00000628343 GPR75-ASB3A0A0A6YYF3 556 aa16.55■□□□□ 0.24
SOX2-OT-246ENST00000628343 BTDP43251 543 aa16.55■□□□□ 0.24
SOX2-OT-246ENST00000628343 GSTO1P78417 241 aa16.55■□□□□ 0.24
SOX2-OT-246ENST00000628343 NFIAQ12857 509 aa16.55■□□□□ 0.24
SOX2-OT-246ENST00000628343 DEFB115Q30KQ5 88 aa16.55■□□□□ 0.24
SOX2-OT-246ENST00000628343 NBPF12Q5TAG4 269 aaPredicted RBP16.55■□□□□ 0.24
SOX2-OT-246ENST00000628343 FKBP1CQ5VVH2 108 aa16.55■□□□□ 0.24
SOX2-OT-246ENST00000628343 MOB2Q70IA6 237 aa16.55■□□□□ 0.24
SOX2-OT-246ENST00000628343 OTUD7AQ8TE49 926 aaPredicted RBP16.55■□□□□ 0.24
SOX2-OT-246ENST00000628343 EDC3Q96F86 508 aaKnown RBP16.55■□□□□ 0.24
SOX2-OT-246ENST00000628343 TEPSINQ96N21 525 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms