RNA–Protein interactions for RNA: ENST00000627620.2

SCN8A-209, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-209ENST00000627620 SSX2IPQ9Y2D8 614 aa14.47□□□□□ -0.09
SCN8A-209ENST00000627620 EIF2AK4Q9P2K8 1649 aaKnown RBP14.47□□□□□ -0.09
SCN8A-209ENST00000627620 A0A1B0GUL7 405 aa14.47□□□□□ -0.09
SCN8A-209ENST00000627620 TIMM10P62072 90 aa14.47□□□□□ -0.09
SCN8A-209ENST00000627620 AKNAD1Q5T1N1 836 aa14.47□□□□□ -0.09
SCN8A-209ENST00000627620 TRAPPC3LQ5T215 181 aa14.47□□□□□ -0.09
SCN8A-209ENST00000627620 IFNKQ9P0W0 207 aa14.47□□□□□ -0.09
SCN8A-209ENST00000627620 EYA2O00167 538 aa14.47□□□□□ -0.09
SCN8A-209ENST00000627620 PAIP2Q9BPZ3 127 aaKnown RBP14.47□□□□□ -0.09
SCN8A-209ENST00000627620 SAP30BPQ9UHR5 308 aaKnown RBP14.47□□□□□ -0.09
SCN8A-209ENST00000627620 BICRAQ9NZM4 1560 aa14.47□□□□□ -0.09
SCN8A-209ENST00000627620 TUBB4AP04350 444 aa14.47□□□□□ -0.09
SCN8A-209ENST00000627620 CPA1P15085 419 aa14.47□□□□□ -0.09
SCN8A-209ENST00000627620 ITGA6P23229 1130 aa14.47□□□□□ -0.09
SCN8A-209ENST00000627620 C6orf163Q5TEZ5 329 aa14.47□□□□□ -0.09
SCN8A-209ENST00000627620 TICAM2Q86XR7 235 aa14.47□□□□□ -0.09
SCN8A-209ENST00000627620 PLBD2Q8NHP8 589 aa14.47□□□□□ -0.09
SCN8A-209ENST00000627620 BTG4Q9NY30 223 aa14.47□□□□□ -0.09
SCN8A-209ENST00000627620 GUCA1BQ9UMX6 200 aa14.47□□□□□ -0.09
SCN8A-209ENST00000627620 MAPKBP1O60336 1514 aa14.47□□□□□ -0.09
SCN8A-209ENST00000627620 VWA3AA6NCI4 1184 aa14.46□□□□□ -0.09
SCN8A-209ENST00000627620 ZBTB7BO15156 539 aaPredicted RBP14.46□□□□□ -0.09
SCN8A-209ENST00000627620 POLD1P28340 1107 aa14.46□□□□□ -0.09
SCN8A-209ENST00000627620 ZNF174Q15697 407 aa14.46□□□□□ -0.09
SCN8A-209ENST00000627620 SREK1Q8WXA9 508 aaKnown RBP14.46□□□□□ -0.09
SCN8A-209ENST00000627620 SRRTQ9BXP5 876 aaKnown RBP14.46□□□□□ -0.09
SCN8A-209ENST00000627620 NUP153P49790 1475 aaKnown RBP14.46□□□□□ -0.09
SCN8A-209ENST00000627620 ATP2C2O75185 946 aa14.46□□□□□ -0.09
SCN8A-209ENST00000627620 PLCB3Q01970 1234 aa14.46□□□□□ -0.09
SCN8A-209ENST00000627620 ZNF790Q6PG37 636 aa14.46□□□□□ -0.09
SCN8A-209ENST00000627620 CCDC50Q8IVM0 306 aa14.46□□□□□ -0.09
SCN8A-209ENST00000627620 TEX11Q8IYF3 940 aa14.46□□□□□ -0.09
SCN8A-209ENST00000627620 KRT222Q8N1A0 295 aa14.46□□□□□ -0.09
SCN8A-209ENST00000627620 PPM1EQ8WY54 764 aa14.46□□□□□ -0.09
SCN8A-209ENST00000627620 GRIPAP1Q4V328 841 aa14.46□□□□□ -0.1
SCN8A-209ENST00000627620 CCDC129Q6ZRS4 1044 aa14.46□□□□□ -0.1
SCN8A-209ENST00000627620 CAPZA3Q96KX2 299 aa14.46□□□□□ -0.1
SCN8A-209ENST00000627620 ZKSCAN5Q9Y2L8 839 aa14.46□□□□□ -0.1
SCN8A-209ENST00000627620 BIVM-ERCC5R4GMW8 1640 aa14.46□□□□□ -0.1
SCN8A-209ENST00000627620 SP4Q02446 784 aa14.45□□□□□ -0.1
SCN8A-209ENST00000627620 KARSQ15046 597 aaKnown RBP14.45□□□□□ -0.1
SCN8A-209ENST00000627620 TTC16Q8NEE8 873 aa14.45□□□□□ -0.1
SCN8A-209ENST00000627620 METTL22Q9BUU2 404 aaPredicted RBP14.45□□□□□ -0.1
SCN8A-209ENST00000627620 LZTFL1Q9NQ48 299 aa14.45□□□□□ -0.1
SCN8A-209ENST00000627620 B4E1Z4 1266 aa14.45□□□□□ -0.1
SCN8A-209ENST00000627620 SLU7O95391 586 aaKnown RBP14.45□□□□□ -0.1
SCN8A-209ENST00000627620 LETM2Q2VYF4 491 aa14.45□□□□□ -0.1
SCN8A-209ENST00000627620 TNNI3KQ59H18 835 aa14.45□□□□□ -0.1
SCN8A-209ENST00000627620 FPGT-TNNI3KV9GXZ4 949 aa14.45□□□□□ -0.1
SCN8A-209ENST00000627620 BACH1O14867 736 aa14.45□□□□□ -0.1
SCN8A-209ENST00000627620 YTHDC2Q9H6S0 1430 aaKnown RBP14.45□□□□□ -0.1
SCN8A-209ENST00000627620 ATP2A1O14983 1001 aa14.45□□□□□ -0.1
SCN8A-209ENST00000627620 CNBD1Q8NA66 436 aa14.45□□□□□ -0.1
SCN8A-209ENST00000627620 LUC7L2Q9Y383 392 aaKnown RBP14.45□□□□□ -0.1
SCN8A-209ENST00000627620 A0A1B0GVL5 298 aa14.45□□□□□ -0.1
SCN8A-209ENST00000627620 RPS6KB1P23443 525 aa14.45□□□□□ -0.1
SCN8A-209ENST00000627620 GOLGA1Q92805 767 aa14.45□□□□□ -0.1
SCN8A-209ENST00000627620 NAP1L4Q99733 375 aaKnown RBP14.45□□□□□ -0.1
SCN8A-209ENST00000627620 SV2BQ7L1I2 683 aa14.44□□□□□ -0.1
SCN8A-209ENST00000627620 OPA1O60313 960 aa14.44□□□□□ -0.1
SCN8A-209ENST00000627620 MAP3K9P80192 1104 aa14.44□□□□□ -0.1
SCN8A-209ENST00000627620 PUM3Q15397 648 aaKnown RBP14.44□□□□□ -0.1
SCN8A-209ENST00000627620 ATL3Q6DD88 541 aa14.44□□□□□ -0.1
SCN8A-209ENST00000627620 UFL1O94874 794 aa14.44□□□□□ -0.1
SCN8A-209ENST00000627620 ARMT1Q9H993 441 aa14.44□□□□□ -0.1
SCN8A-209ENST00000627620 ELP1O95163 1332 aa14.44□□□□□ -0.1
SCN8A-209ENST00000627620 HIBADHP31937 336 aaKnown RBP14.44□□□□□ -0.1
SCN8A-209ENST00000627620 HSPA2P54652 639 aa14.44□□□□□ -0.1
SCN8A-209ENST00000627620 PARP10Q53GL7 1025 aa14.44□□□□□ -0.1
SCN8A-209ENST00000627620 ZNF569Q5MCW4 686 aa14.44□□□□□ -0.1
SCN8A-209ENST00000627620 GPCPD1Q9NPB8 672 aa14.44□□□□□ -0.1
SCN8A-209ENST00000627620 KIF4AO95239 1232 aa14.43□□□□□ -0.1
SCN8A-209ENST00000627620 FBF1Q8TES7 1133 aa14.43□□□□□ -0.1
SCN8A-209ENST00000627620 NSRP1Q9H0G5 558 aaKnown RBP14.43□□□□□ -0.1
SCN8A-209ENST00000627620 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.43□□□□□ -0.1
SCN8A-209ENST00000627620 V9GYY5 206 aaPredicted RBP14.43□□□□□ -0.1
SCN8A-209ENST00000627620 SH3TC1Q8TE82 1336 aa14.43□□□□□ -0.1
SCN8A-209ENST00000627620 RPL13P26373 211 aaKnown RBP14.43□□□□□ -0.1
SCN8A-209ENST00000627620 DBNDD2Q9BQY9 259 aa14.43□□□□□ -0.1
SCN8A-209ENST00000627620 ECM2O94769 699 aaPredicted RBP14.43□□□□□ -0.1
SCN8A-209ENST00000627620 DCAF17Q5H9S7 520 aaPredicted RBP14.43□□□□□ -0.1
SCN8A-209ENST00000627620 CCDC65Q8IXS2 484 aa14.43□□□□□ -0.1
SCN8A-209ENST00000627620 OTUD6BQ8N6M0 293 aa14.43□□□□□ -0.1
SCN8A-209ENST00000627620 XAGE2Q96GT9 111 aa14.43□□□□□ -0.1
SCN8A-209ENST00000627620 PKD2L1Q9P0L9 805 aa14.43□□□□□ -0.1
SCN8A-209ENST00000627620 TERF1P54274 439 aa14.43□□□□□ -0.1
SCN8A-209ENST00000627620 ZFP91Q96JP5 570 aaPredicted RBP14.43□□□□□ -0.1
SCN8A-209ENST00000627620 TMEM87BQ96K49 555 aa14.43□□□□□ -0.1
SCN8A-209ENST00000627620 SH2D4AQ9H788 454 aa14.43□□□□□ -0.1
SCN8A-209ENST00000627620 SLC27A2O14975 620 aa14.43□□□□□ -0.1
SCN8A-209ENST00000627620 RAPGEF1Q13905 1077 aa14.43□□□□□ -0.1
SCN8A-209ENST00000627620 RILPL1Q5EBL4 403 aa14.43□□□□□ -0.1
SCN8A-209ENST00000627620 KLHDC4Q8TBB5 520 aa14.43□□□□□ -0.1
SCN8A-209ENST00000627620 DEXIO95424 95 aa14.42□□□□□ -0.1
SCN8A-209ENST00000627620 SEC24BO95487 1268 aa14.42□□□□□ -0.1
SCN8A-209ENST00000627620 ARL1P40616 181 aaPredicted RBP14.42□□□□□ -0.1
SCN8A-209ENST00000627620 STMN4Q9H169 189 aaPredicted RBP14.42□□□□□ -0.1
SCN8A-209ENST00000627620 CEP83Q9Y592 693 aa14.42□□□□□ -0.1
SCN8A-209ENST00000627620 FAM160A1Q05DH4 1040 aa14.42□□□□□ -0.1
SCN8A-209ENST00000627620 ATP6V0A2Q9Y487 856 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms