RNA–Protein interactions for RNA: ENST00000627317.1

PNKP-221, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 767 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-221ENST00000627317 HSPA1BP0DMV9 641 aaKnown RBP18.04■□□□□ 0.48
PNKP-221ENST00000627317 EAF2Q96CJ1 260 aaPredicted RBP18.04■□□□□ 0.48
PNKP-221ENST00000627317 CDCA5Q96FF9 252 aa18.04■□□□□ 0.48
PNKP-221ENST00000627317 CAPNS2Q96L46 248 aa18.04■□□□□ 0.48
PNKP-221ENST00000627317 PHKA1P46020 1223 aa18.03■□□□□ 0.48
PNKP-221ENST00000627317 CCDC102BQ68D86 513 aa18.03■□□□□ 0.48
PNKP-221ENST00000627317 DBNDD2Q9BQY9 259 aa18.03■□□□□ 0.48
PNKP-221ENST00000627317 CCDC8Q9H0W5 538 aaPredicted RBP18.03■□□□□ 0.48
PNKP-221ENST00000627317 ZNF408Q9H9D4 720 aa18.03■□□□□ 0.48
PNKP-221ENST00000627317 TLR7Q9NYK1 1049 aaKnown RBP18.03■□□□□ 0.48
PNKP-221ENST00000627317 DBNLQ9UJU6 430 aaKnown RBP18.03■□□□□ 0.48
PNKP-221ENST00000627317 IQSEC3Q9UPP2 1182 aaPredicted RBP18.03■□□□□ 0.48
PNKP-221ENST00000627317 PCDHAC2Q9Y5I4 1007 aa18.03■□□□□ 0.48
PNKP-221ENST00000627317 AOX1Q06278 1338 aa18.02■□□□□ 0.48
PNKP-221ENST00000627317 MFSD14BQ5SR56 506 aa18.02■□□□□ 0.48
PNKP-221ENST00000627317 ANKRD45Q5TZF3 282 aa18.02■□□□□ 0.48
PNKP-221ENST00000627317 CYP4F22Q6NT55 531 aa18.02■□□□□ 0.48
PNKP-221ENST00000627317 SMC5Q8IY18 1101 aa18.02■□□□□ 0.48
PNKP-221ENST00000627317 HDAC9Q9UKV0 1011 aa18.02■□□□□ 0.48
PNKP-221ENST00000627317 SCAF8Q9UPN6 1271 aaKnown RBP18.02■□□□□ 0.48
PNKP-221ENST00000627317 MYH13Q9UKX3 1938 aa18.02■□□□□ 0.47
PNKP-221ENST00000627317 SPDYE2BA6NHP3 402 aa18.01■□□□□ 0.47
PNKP-221ENST00000627317 SPDYE6P0CI01 402 aa18.01■□□□□ 0.47
PNKP-221ENST00000627317 CHAF1AQ13111 956 aaPredicted RBP18.01■□□□□ 0.47
PNKP-221ENST00000627317 GRIK5Q16478 980 aa18.01■□□□□ 0.47
PNKP-221ENST00000627317 CCDC158Q5M9N0 1113 aa18.01■□□□□ 0.47
PNKP-221ENST00000627317 TTC39AQ5SRH9 613 aa18.01■□□□□ 0.47
PNKP-221ENST00000627317 ERICH6BQ5W0A0 696 aa18.01■□□□□ 0.47
PNKP-221ENST00000627317 GBA2Q9HCG7 927 aaPredicted RBP18.01■□□□□ 0.47
PNKP-221ENST00000627317 B4GALNT3Q6L9W6 998 aa18■□□□□ 0.47
PNKP-221ENST00000627317 WBP1LQ9NX94 342 aa18■□□□□ 0.47
PNKP-221ENST00000627317 PAPPA2Q9BXP8 1791 aa17.99■□□□□ 0.47
PNKP-221ENST00000627317 POLR2AP24928 1970 aaKnown RBP17.99■□□□□ 0.47
PNKP-221ENST00000627317 F8W031 263 aaPredicted RBP17.99■□□□□ 0.47
PNKP-221ENST00000627317 SEMA3EO15041 775 aa17.99■□□□□ 0.47
PNKP-221ENST00000627317 ZBTB22O15209 634 aa17.99■□□□□ 0.47
PNKP-221ENST00000627317 UQCRFS1P1P0C7P4 283 aa17.99■□□□□ 0.47
PNKP-221ENST00000627317 ECE1P42892 770 aa17.99■□□□□ 0.47
PNKP-221ENST00000627317 HUNKP57058 714 aa17.99■□□□□ 0.47
PNKP-221ENST00000627317 DLGAP5Q15398 846 aa17.99■□□□□ 0.47
PNKP-221ENST00000627317 CCDC136Q96JN2 1154 aa17.99■□□□□ 0.47
PNKP-221ENST00000627317 DENND2AQ9ULE3 1009 aa17.99■□□□□ 0.47
PNKP-221ENST00000627317 FAM155AB1AL88 458 aaPredicted RBP17.98■□□□□ 0.47
PNKP-221ENST00000627317 ARID4AP29374 1257 aaPredicted RBP17.98■□□□□ 0.47
PNKP-221ENST00000627317 RASGRF1Q13972 1273 aa17.98■□□□□ 0.47
PNKP-221ENST00000627317 CFAP100Q494V2 611 aa17.98■□□□□ 0.47
PNKP-221ENST00000627317 APOBEC3FQ8IUX4 373 aaKnown RBP17.98■□□□□ 0.47
PNKP-221ENST00000627317 GPATCH3Q96I76 525 aa17.98■□□□□ 0.47
PNKP-221ENST00000627317 PRMT6Q96LA8 375 aaPredicted RBP17.98■□□□□ 0.47
PNKP-221ENST00000627317 SERPINA10Q9UK55 444 aa17.98■□□□□ 0.47
PNKP-221ENST00000627317 SSC5DA1L4H1 1573 aa17.98■□□□□ 0.47
PNKP-221ENST00000627317 FOXN1O15353 648 aa17.97■□□□□ 0.47
PNKP-221ENST00000627317 AOC2O75106 756 aa17.97■□□□□ 0.47
PNKP-221ENST00000627317 FKBP1BP68106 108 aa17.97■□□□□ 0.47
PNKP-221ENST00000627317 PRAMEF18Q5VWM3 479 aa17.97■□□□□ 0.47
PNKP-221ENST00000627317 C2orf69Q8N8R5 385 aa17.97■□□□□ 0.47
PNKP-221ENST00000627317 TBC1D22AQ8WUA7 517 aa17.97■□□□□ 0.47
PNKP-221ENST00000627317 LNPKQ9C0E8 428 aa17.97■□□□□ 0.47
PNKP-221ENST00000627317 MAP2K2P36507 400 aa17.96■□□□□ 0.47
PNKP-221ENST00000627317 NUCB1Q02818 461 aa17.96■□□□□ 0.47
PNKP-221ENST00000627317 WDR66Q8TBY9 1149 aa17.96■□□□□ 0.47
PNKP-221ENST00000627317 TTF2Q9UNY4 1162 aaKnown RBP17.96■□□□□ 0.47
PNKP-221ENST00000627317 PDS5AQ29RF7 1337 aaKnown RBP17.96■□□□□ 0.46
PNKP-221ENST00000627317 ECM29Q5VYK3 1845 aa17.95■□□□□ 0.46
PNKP-221ENST00000627317 MCAMP43121 646 aa17.95■□□□□ 0.46
PNKP-221ENST00000627317 PAXIP1Q6ZW49 1069 aaPredicted RBP17.95■□□□□ 0.46
PNKP-221ENST00000627317 CENPQQ7L2Z9 268 aaPredicted RBP17.95■□□□□ 0.46
PNKP-221ENST00000627317 CHD1LQ86WJ1 897 aa17.95■□□□□ 0.46
PNKP-221ENST00000627317 SPATA5Q8NB90 893 aa17.95■□□□□ 0.46
PNKP-221ENST00000627317 ZNF512BQ96KM6 892 aaPredicted RBP17.95■□□□□ 0.46
PNKP-221ENST00000627317 ZIC5Q96T25 663 aa17.95■□□□□ 0.46
PNKP-221ENST00000627317 PPP4R2Q9NY27 417 aa17.95■□□□□ 0.46
PNKP-221ENST00000627317 HMG20BQ9P0W2 317 aa17.95■□□□□ 0.46
PNKP-221ENST00000627317 CRKP46108 304 aa17.94■□□□□ 0.46
PNKP-221ENST00000627317 HDLBPQ00341 1268 aaKnown RBP17.94■□□□□ 0.46
PNKP-221ENST00000627317 MAP2K1Q02750 393 aaPredicted RBP17.94■□□□□ 0.46
PNKP-221ENST00000627317 SPDYE2Q495Y8 402 aa17.94■□□□□ 0.46
PNKP-221ENST00000627317 COL13A1Q5TAT6 717 aaPredicted RBP17.94■□□□□ 0.46
PNKP-221ENST00000627317 RGMBQ6NW40 437 aa17.94■□□□□ 0.46
PNKP-221ENST00000627317 PI16Q6UXB8 463 aa17.94■□□□□ 0.46
PNKP-221ENST00000627317 DEFB129Q9H1M3 183 aa17.94■□□□□ 0.46
PNKP-221ENST00000627317 ECHDC1Q9NTX5 307 aa17.94■□□□□ 0.46
PNKP-221ENST00000627317 SUGT1Q9Y2Z0 365 aa17.94■□□□□ 0.46
PNKP-221ENST00000627317 CLRN2A0PK11 232 aa17.93■□□□□ 0.46
PNKP-221ENST00000627317 SLC10A3P09131 477 aa17.93■□□□□ 0.46
PNKP-221ENST00000627317 GRM1Q13255 1194 aa17.93■□□□□ 0.46
PNKP-221ENST00000627317 MOB2Q70IA6 237 aa17.93■□□□□ 0.46
PNKP-221ENST00000627317 ZGPATQ8N5A5 531 aaKnown RBP17.93■□□□□ 0.46
PNKP-221ENST00000627317 OTUD7AQ8TE49 926 aaPredicted RBP17.93■□□□□ 0.46
PNKP-221ENST00000627317 SNRKQ9NRH2 765 aa17.93■□□□□ 0.46
PNKP-221ENST00000627317 PPP2R3BQ9Y5P8 575 aa17.93■□□□□ 0.46
PNKP-221ENST00000627317 ATP5JP18859 108 aa17.92■□□□□ 0.46
PNKP-221ENST00000627317 MX1P20591 662 aa17.92■□□□□ 0.46
PNKP-221ENST00000627317 NOGQ13253 232 aa17.92■□□□□ 0.46
PNKP-221ENST00000627317 RASAL3Q86YV0 1011 aa17.92■□□□□ 0.46
PNKP-221ENST00000627317 MRIQ9BWK5 157 aa17.92■□□□□ 0.46
PNKP-221ENST00000627317 SALL1Q9NSC2 1324 aa17.92■□□□□ 0.46
PNKP-221ENST00000627317 MYO1BO43795 1136 aa17.91■□□□□ 0.46
PNKP-221ENST00000627317 ZAP70P43403 619 aa17.91■□□□□ 0.46
PNKP-221ENST00000627317 TSHZ3Q63HK5 1081 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms