RNA–Protein interactions for RNA: ENST00000627238.1

TRIM29-221, Transcript of tripartite motif containing 29, humanhuman

TSL 5 BASIC

Gene TRIM29, Length 510 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM29-221ENST00000627238 VGLL2Q8N8G2 317 aa20.8■□□□□ 0.92
TRIM29-221ENST00000627238 KIF16BQ96L93 1317 aa20.79■□□□□ 0.92
TRIM29-221ENST00000627238 TBC1D22AQ8WUA7 517 aa20.79■□□□□ 0.92
TRIM29-221ENST00000627238 ERO1AQ96HE7 468 aa20.79■□□□□ 0.92
TRIM29-221ENST00000627238 PTPN18Q99952 460 aa20.79■□□□□ 0.92
TRIM29-221ENST00000627238 MRIQ9BWK5 157 aa20.79■□□□□ 0.92
TRIM29-221ENST00000627238 TDRD3Q9H7E2 651 aaKnown RBP20.79■□□□□ 0.92
TRIM29-221ENST00000627238 CRKP46108 304 aa20.78■□□□□ 0.92
TRIM29-221ENST00000627238 CRHR2Q13324 411 aa20.78■□□□□ 0.92
TRIM29-221ENST00000627238 INTS3Q68E01 1043 aaKnown RBP20.78■□□□□ 0.92
TRIM29-221ENST00000627238 ANKRD44Q8N8A2 993 aa20.78■□□□□ 0.92
TRIM29-221ENST00000627238 MS4A4AQ96JQ5 239 aa20.78■□□□□ 0.92
TRIM29-221ENST00000627238 BICC1Q9H694 974 aaKnown RBP20.78■□□□□ 0.92
TRIM29-221ENST00000627238 TRIM17Q9Y577 477 aa20.78■□□□□ 0.92
TRIM29-221ENST00000627238 PTPRCP08575 1304 aa20.78■□□□□ 0.92
TRIM29-221ENST00000627238 PDE8BO95263 885 aa20.77■□□□□ 0.92
TRIM29-221ENST00000627238 TNNI2P48788 182 aa20.77■□□□□ 0.92
TRIM29-221ENST00000627238 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.77■□□□□ 0.92
TRIM29-221ENST00000627238 MRPL50Q8N5N7 158 aaKnown RBP20.77■□□□□ 0.92
TRIM29-221ENST00000627238 OPTNQ96CV9 577 aa20.77■□□□□ 0.92
TRIM29-221ENST00000627238 ZNF316A6NFI3 1004 aaPredicted RBP20.76■□□□□ 0.91
TRIM29-221ENST00000627238 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.76■□□□□ 0.91
TRIM29-221ENST00000627238 SUGT1Q9Y2Z0 365 aa20.76■□□□□ 0.91
TRIM29-221ENST00000627238 ZEB1P37275 1124 aaPredicted RBP20.75■□□□□ 0.91
TRIM29-221ENST00000627238 GRIK5Q16478 980 aa20.75■□□□□ 0.91
TRIM29-221ENST00000627238 LRRC24Q50LG9 513 aa20.75■□□□□ 0.91
TRIM29-221ENST00000627238 CAVIN4Q5BKX8 364 aa20.75■□□□□ 0.91
TRIM29-221ENST00000627238 FKBP1CQ5VVH2 108 aa20.75■□□□□ 0.91
TRIM29-221ENST00000627238 CDAN1Q8IWY9 1227 aa20.75■□□□□ 0.91
TRIM29-221ENST00000627238 TMEM39BQ9GZU3 492 aa20.75■□□□□ 0.91
TRIM29-221ENST00000627238 PTPN22Q9Y2R2 807 aa20.75■□□□□ 0.91
TRIM29-221ENST00000627238 MAP3K9P80192 1104 aa20.74■□□□□ 0.91
TRIM29-221ENST00000627238 SP3Q02447 781 aa20.74■□□□□ 0.91
TRIM29-221ENST00000627238 VPS37DQ86XT2 251 aa20.74■□□□□ 0.91
TRIM29-221ENST00000627238 FAM9BQ8IZU0 186 aa20.74■□□□□ 0.91
TRIM29-221ENST00000627238 ARMC5Q96C12 935 aa20.74■□□□□ 0.91
TRIM29-221ENST00000627238 ZDHHC15Q96MV8 337 aa20.74■□□□□ 0.91
TRIM29-221ENST00000627238 ELP3Q9H9T3 547 aa20.74■□□□□ 0.91
TRIM29-221ENST00000627238 RPAP1Q9BWH6 1393 aaPredicted RBP20.73■□□□□ 0.91
TRIM29-221ENST00000627238 FGFR2P21802 821 aa20.73■□□□□ 0.91
TRIM29-221ENST00000627238 VGLL4Q14135 290 aa20.73■□□□□ 0.91
TRIM29-221ENST00000627238 METTL24Q5JXM2 366 aa20.73■□□□□ 0.91
TRIM29-221ENST00000627238 FAM83AQ86UY5 434 aa20.73■□□□□ 0.91
TRIM29-221ENST00000627238 CD99L2Q8TCZ2 262 aa20.73■□□□□ 0.91
TRIM29-221ENST00000627238 TCP10L2B9ZVM9 353 aa20.72■□□□□ 0.91
TRIM29-221ENST00000627238 GTF2A2P52657 109 aa20.72■□□□□ 0.91
TRIM29-221ENST00000627238 BRI3BPQ8WY22 251 aa20.72■□□□□ 0.91
TRIM29-221ENST00000627238 TEKT1Q969V4 418 aa20.72■□□□□ 0.91
TRIM29-221ENST00000627238 EFCC1Q9HA90 598 aa20.72■□□□□ 0.91
TRIM29-221ENST00000627238 ZCCHC17Q9NP64 241 aaKnown RBP20.72■□□□□ 0.91
TRIM29-221ENST00000627238 MAST3O60307 1309 aa20.72■□□□□ 0.91
TRIM29-221ENST00000627238 SPDYE5A6NIY4 337 aa20.71■□□□□ 0.91
TRIM29-221ENST00000627238 USP44Q9H0E7 712 aa20.71■□□□□ 0.91
TRIM29-221ENST00000627238 CSADQ9Y600 493 aa20.71■□□□□ 0.91
TRIM29-221ENST00000627238 CAP1Q01518 475 aa20.7■□□□□ 0.9
TRIM29-221ENST00000627238 PUM3Q15397 648 aaKnown RBP20.7■□□□□ 0.9
TRIM29-221ENST00000627238 APOBEC3HQ6NTF7 200 aaKnown RBP20.7■□□□□ 0.9
TRIM29-221ENST00000627238 HHIPL2Q6UWX4 724 aa20.7■□□□□ 0.9
TRIM29-221ENST00000627238 HOOK2Q96ED9 719 aa20.7■□□□□ 0.9
TRIM29-221ENST00000627238 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.7■□□□□ 0.9
TRIM29-221ENST00000627238 IQSEC3Q9UPP2 1182 aaPredicted RBP20.7■□□□□ 0.9
TRIM29-221ENST00000627238 KIAA0100Q14667 2235 aaKnown RBP20.69■□□□□ 0.9
TRIM29-221ENST00000627238 MYH13Q9UKX3 1938 aa20.69■□□□□ 0.9
TRIM29-221ENST00000627238 CCL15-CCL14A0A0B4J2E2 113 aa20.69■□□□□ 0.9
TRIM29-221ENST00000627238 E9PSI1 815 aa20.69■□□□□ 0.9
TRIM29-221ENST00000627238 IFIT1P09914 478 aaKnown RBP20.69■□□□□ 0.9
TRIM29-221ENST00000627238 RFX5P48382 616 aaPredicted RBP20.69■□□□□ 0.9
TRIM29-221ENST00000627238 BCAMP50895 628 aa20.69■□□□□ 0.9
TRIM29-221ENST00000627238 CHAF1AQ13111 956 aaPredicted RBP20.69■□□□□ 0.9
TRIM29-221ENST00000627238 CCL15Q16663 113 aa20.69■□□□□ 0.9
TRIM29-221ENST00000627238 CNKSR2Q8WXI2 1034 aa20.69■□□□□ 0.9
TRIM29-221ENST00000627238 ZFYVE28Q9HCC9 887 aa20.69■□□□□ 0.9
TRIM29-221ENST00000627238 POTEFA5A3E0 1075 aa20.68■□□□□ 0.9
TRIM29-221ENST00000627238 ZBTB22O15209 634 aa20.68■□□□□ 0.9
TRIM29-221ENST00000627238 FRAT2O75474 233 aaPredicted RBP20.68■□□□□ 0.9
TRIM29-221ENST00000627238 ARHGEF6Q15052 776 aa20.68■□□□□ 0.9
TRIM29-221ENST00000627238 ERO1BQ86YB8 467 aa20.68■□□□□ 0.9
TRIM29-221ENST00000627238 KLHDC4Q8TBB5 520 aa20.68■□□□□ 0.9
TRIM29-221ENST00000627238 SSH1Q8WYL5 1049 aa20.68■□□□□ 0.9
TRIM29-221ENST00000627238 SNCAIPQ9Y6H5 919 aa20.68■□□□□ 0.9
TRIM29-221ENST00000627238 TAF1CQ15572 869 aaPredicted RBP20.67■□□□□ 0.9
TRIM29-221ENST00000627238 ALDH1L2Q3SY69 923 aa20.67■□□□□ 0.9
TRIM29-221ENST00000627238 FAM43AQ8N2R8 423 aa20.67■□□□□ 0.9
TRIM29-221ENST00000627238 OTUD5Q96G74 571 aa20.67■□□□□ 0.9
TRIM29-221ENST00000627238 TMOD2Q9NZR1 351 aa20.67■□□□□ 0.9
TRIM29-221ENST00000627238 FBXO3Q9UK99 471 aa20.67■□□□□ 0.9
TRIM29-221ENST00000627238 EYA2O00167 538 aa20.66■□□□□ 0.9
TRIM29-221ENST00000627238 WDR66Q8TBY9 1149 aa20.66■□□□□ 0.9
TRIM29-221ENST00000627238 LPIN2Q92539 896 aa20.66■□□□□ 0.9
TRIM29-221ENST00000627238 GCC1Q96CN9 775 aa20.66■□□□□ 0.9
TRIM29-221ENST00000627238 ZNF333Q96JL9 665 aa20.66■□□□□ 0.9
TRIM29-221ENST00000627238 TLR2O60603 784 aa20.65■□□□□ 0.9
TRIM29-221ENST00000627238 CETPP11597 493 aa20.65■□□□□ 0.9
TRIM29-221ENST00000627238 CACNB3P54284 484 aa20.65■□□□□ 0.9
TRIM29-221ENST00000627238 SLFN5Q08AF3 891 aa20.65■□□□□ 0.9
TRIM29-221ENST00000627238 DCAF15Q66K64 600 aa20.65■□□□□ 0.9
TRIM29-221ENST00000627238 WRNIP1Q96S55 665 aa20.65■□□□□ 0.9
TRIM29-221ENST00000627238 PPIL2Q13356 520 aa20.64■□□□□ 0.89
TRIM29-221ENST00000627238 SNAPC2Q13487 334 aa20.64■□□□□ 0.89
TRIM29-221ENST00000627238 ATG9AQ7Z3C6 839 aa20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms