RNA–Protein interactions for RNA: ENST00000627109.2

CTNNA1-244, Transcript of catenin alpha 1, humanhuman

TSL 5 BASIC

Gene CTNNA1, Length 3,831 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-244ENST00000627109 TPM3P06753 285 aa8.42□□□□□ -1.06
CTNNA1-244ENST00000627109 CCDC192P0DO97 292 aa8.42□□□□□ -1.06
CTNNA1-244ENST00000627109 CDC25BP30305 580 aa8.42□□□□□ -1.06
CTNNA1-244ENST00000627109 PLA2G4DQ86XP0 818 aa8.42□□□□□ -1.06
CTNNA1-244ENST00000627109 MB21D2Q8IYB1 491 aaPredicted RBP8.42□□□□□ -1.06
CTNNA1-244ENST00000627109 NEUROD6Q96NK8 337 aa8.42□□□□□ -1.06
CTNNA1-244ENST00000627109 AKAP2Q9Y2D5 859 aa8.42□□□□□ -1.06
CTNNA1-244ENST00000627109 R3HDM1Q15032 1099 aaKnown RBP8.42□□□□□ -1.06
CTNNA1-244ENST00000627109 GIMAP6Q6P9H5 292 aa8.42□□□□□ -1.06
CTNNA1-244ENST00000627109 GIGYF2Q6Y7W6 1299 aaKnown RBP8.42□□□□□ -1.06
CTNNA1-244ENST00000627109 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.42□□□□□ -1.06
CTNNA1-244ENST00000627109 DRC7Q8IY82 874 aa8.42□□□□□ -1.06
CTNNA1-244ENST00000627109 ENGASEQ8NFI3 743 aa8.42□□□□□ -1.06
CTNNA1-244ENST00000627109 STK32BQ9NY57 414 aa8.42□□□□□ -1.06
CTNNA1-244ENST00000627109 LAMB1P07942 1786 aa8.42□□□□□ -1.06
CTNNA1-244ENST00000627109 PDIA3P30101 505 aaKnown RBP8.42□□□□□ -1.06
CTNNA1-244ENST00000627109 MAP3K11Q16584 847 aa8.42□□□□□ -1.06
CTNNA1-244ENST00000627109 BRF1Q92994 677 aa8.42□□□□□ -1.06
CTNNA1-244ENST00000627109 OSBP2Q969R2 916 aa8.42□□□□□ -1.06
CTNNA1-244ENST00000627109 NDUFB9Q9Y6M9 179 aa8.42□□□□□ -1.06
CTNNA1-244ENST00000627109 NEDD4P46934 1319 aa8.42□□□□□ -1.06
CTNNA1-244ENST00000627109 GOLIM4O00461 696 aa8.41□□□□□ -1.06
CTNNA1-244ENST00000627109 RFC4P35249 363 aa8.41□□□□□ -1.06
CTNNA1-244ENST00000627109 SNW1Q13573 536 aaKnown RBP8.41□□□□□ -1.06
CTNNA1-244ENST00000627109 MSL1Q68DK7 614 aa8.41□□□□□ -1.06
CTNNA1-244ENST00000627109 SARM1Q6SZW1 724 aa8.41□□□□□ -1.06
CTNNA1-244ENST00000627109 PUS3Q9BZE2 481 aaKnown RBP8.41□□□□□ -1.06
CTNNA1-244ENST00000627109 NUP62CLQ9H1M0 184 aa8.41□□□□□ -1.06
CTNNA1-244ENST00000627109 ERVV-1B6SEH8 477 aa8.41□□□□□ -1.06
CTNNA1-244ENST00000627109 PPFIA3O75145 1194 aa8.41□□□□□ -1.06
CTNNA1-244ENST00000627109 FDPSP14324 419 aaKnown RBP8.41□□□□□ -1.06
CTNNA1-244ENST00000627109 ARID4AP29374 1257 aaPredicted RBP8.41□□□□□ -1.06
CTNNA1-244ENST00000627109 TIMM10P62072 90 aa8.41□□□□□ -1.06
CTNNA1-244ENST00000627109 TYRO3Q06418 890 aa8.41□□□□□ -1.06
CTNNA1-244ENST00000627109 SPATA32Q96LK8 384 aa8.41□□□□□ -1.06
CTNNA1-244ENST00000627109 ZNF830Q96NB3 372 aaPredicted RBP8.41□□□□□ -1.06
CTNNA1-244ENST00000627109 KCNF1Q9H3M0 494 aa8.41□□□□□ -1.06
CTNNA1-244ENST00000627109 ZBTB3Q9H5J0 574 aa8.41□□□□□ -1.06
CTNNA1-244ENST00000627109 CFAP45Q9UL16 551 aa8.41□□□□□ -1.06
CTNNA1-244ENST00000627109 MYH14Q7Z406 1995 aaKnown RBP8.41□□□□□ -1.06
CTNNA1-244ENST00000627109 IFIT1P09914 478 aaKnown RBP8.41□□□□□ -1.06
CTNNA1-244ENST00000627109 LRRFIP1Q32MZ4 808 aaKnown RBP8.41□□□□□ -1.06
CTNNA1-244ENST00000627109 NBPF3Q9H094 633 aa8.41□□□□□ -1.06
CTNNA1-244ENST00000627109 HPS5Q9UPZ3 1129 aa8.41□□□□□ -1.06
CTNNA1-244ENST00000627109 RTCBQ9Y3I0 505 aaKnown RBP8.41□□□□□ -1.06
CTNNA1-244ENST00000627109 ZPR1O75312 459 aa8.4□□□□□ -1.06
CTNNA1-244ENST00000627109 FGFR2P21802 821 aa8.4□□□□□ -1.06
CTNNA1-244ENST00000627109 CEBPZQ03701 1054 aaKnown RBP8.4□□□□□ -1.06
CTNNA1-244ENST00000627109 CAMK4Q16566 473 aa8.4□□□□□ -1.06
CTNNA1-244ENST00000627109 APPBP2Q92624 585 aa8.4□□□□□ -1.06
CTNNA1-244ENST00000627109 XAGE2Q96GT9 111 aa8.4□□□□□ -1.06
CTNNA1-244ENST00000627109 CACNA1SQ13698 1873 aa8.4□□□□□ -1.06
CTNNA1-244ENST00000627109 COL4A1P02462 1669 aa8.4□□□□□ -1.06
CTNNA1-244ENST00000627109 A0A0G2JLW4 131 aa8.4□□□□□ -1.06
CTNNA1-244ENST00000627109 H3BQV1 296 aa8.4□□□□□ -1.06
CTNNA1-244ENST00000627109 CYP19A1P11511 503 aaPredicted RBP8.4□□□□□ -1.06
CTNNA1-244ENST00000627109 IFFO2Q5TF58 517 aa8.4□□□□□ -1.06
CTNNA1-244ENST00000627109 SASS6Q6UVJ0 657 aa8.4□□□□□ -1.06
CTNNA1-244ENST00000627109 NLRP10Q86W26 655 aa8.4□□□□□ -1.06
CTNNA1-244ENST00000627109 SPC24Q8NBT2 197 aa8.4□□□□□ -1.06
CTNNA1-244ENST00000627109 KIAA1524Q8TCG1 905 aa8.4□□□□□ -1.06
CTNNA1-244ENST00000627109 SLC4A9Q96Q91 983 aa8.4□□□□□ -1.06
CTNNA1-244ENST00000627109 ATF5Q9Y2D1 282 aaPredicted RBP8.4□□□□□ -1.06
CTNNA1-244ENST00000627109 TCRBV5S4A2TA0A5A2 114 aa8.4□□□□□ -1.07
CTNNA1-244ENST00000627109 PTPDC1A2A3K4 754 aa8.4□□□□□ -1.07
CTNNA1-244ENST00000627109 ANTXR2P58335 489 aa8.4□□□□□ -1.07
CTNNA1-244ENST00000627109 IQCB1Q15051 598 aa8.4□□□□□ -1.07
CTNNA1-244ENST00000627109 FAM173BQ6P4H8 233 aa8.4□□□□□ -1.07
CTNNA1-244ENST00000627109 ZNF594Q96JF6 807 aaPredicted RBP8.4□□□□□ -1.07
CTNNA1-244ENST00000627109 KCND1Q9NSA2 647 aa8.4□□□□□ -1.07
CTNNA1-244ENST00000627109 CTNNA3Q9UI47 895 aa8.4□□□□□ -1.07
CTNNA1-244ENST00000627109 A0A1W2PQ27 194 aa8.39□□□□□ -1.07
CTNNA1-244ENST00000627109 A0A1W2PQ64 194 aa8.39□□□□□ -1.07
CTNNA1-244ENST00000627109 A0A1W2PQD8 194 aa8.39□□□□□ -1.07
CTNNA1-244ENST00000627109 CTAGE5O15320 804 aa8.39□□□□□ -1.07
CTNNA1-244ENST00000627109 NR1I2O75469 434 aa8.39□□□□□ -1.07
CTNNA1-244ENST00000627109 ALX1Q15699 326 aa8.39□□□□□ -1.07
CTNNA1-244ENST00000627109 TRAPPC3LQ5T215 181 aa8.39□□□□□ -1.07
CTNNA1-244ENST00000627109 TTLL11Q8NHH1 800 aa8.39□□□□□ -1.07
CTNNA1-244ENST00000627109 BICD2Q8TD16 824 aa8.39□□□□□ -1.07
CTNNA1-244ENST00000627109 DDX11Q96FC9 970 aa8.39□□□□□ -1.07
CTNNA1-244ENST00000627109 DACT1Q9NYF0 836 aa8.39□□□□□ -1.07
CTNNA1-244ENST00000627109 RTEL1Q9NZ71 1219 aa8.39□□□□□ -1.07
CTNNA1-244ENST00000627109 TFIP11Q9UBB9 837 aaKnown RBP8.39□□□□□ -1.07
CTNNA1-244ENST00000627109 FAM237AA0A1B0GTK4 181 aa8.39□□□□□ -1.07
CTNNA1-244ENST00000627109 DYNC1I1O14576 645 aa8.39□□□□□ -1.07
CTNNA1-244ENST00000627109 ZBTB7AO95365 584 aa8.39□□□□□ -1.07
CTNNA1-244ENST00000627109 GPTP24298 496 aa8.39□□□□□ -1.07
CTNNA1-244ENST00000627109 CRKLP46109 303 aaKnown RBP8.39□□□□□ -1.07
CTNNA1-244ENST00000627109 ITPK1Q13572 414 aa8.39□□□□□ -1.07
CTNNA1-244ENST00000627109 HSP90AB3PQ58FF7 597 aa8.39□□□□□ -1.07
CTNNA1-244ENST00000627109 GORABQ5T7V8 394 aa8.39□□□□□ -1.07
CTNNA1-244ENST00000627109 ZNF34Q8IZ26 560 aa8.39□□□□□ -1.07
CTNNA1-244ENST00000627109 PRIMPOLQ96LW4 560 aa8.39□□□□□ -1.07
CTNNA1-244ENST00000627109 LRRC4BQ9NT99 713 aa8.39□□□□□ -1.07
CTNNA1-244ENST00000627109 ZBTB1Q9Y2K1 713 aa8.39□□□□□ -1.07
CTNNA1-244ENST00000627109 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.39□□□□□ -1.07
CTNNA1-244ENST00000627109 ADORA1P30542 326 aa8.39□□□□□ -1.07
CTNNA1-244ENST00000627109 ADD2P35612 726 aa8.39□□□□□ -1.07
CTNNA1-244ENST00000627109 SCARF1Q14162 830 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms