RNA–Protein interactions for RNA: ENST00000626828.1

UBE3D-208, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5 BASIC

Gene UBE3D, Length 114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-208ENST00000626828 RRP1P56182 461 aaKnown RBP20.6■□□□□ 0.89
UBE3D-208ENST00000626828 HHIPL2Q6UWX4 724 aa20.6■□□□□ 0.89
UBE3D-208ENST00000626828 SIRT2Q8IXJ6 389 aa20.6■□□□□ 0.89
UBE3D-208ENST00000626828 HHIPL1Q96JK4 782 aa20.6■□□□□ 0.89
UBE3D-208ENST00000626828 GBA2Q9HCG7 927 aaPredicted RBP20.6■□□□□ 0.89
UBE3D-208ENST00000626828 EXOC6BQ9Y2D4 811 aa20.6■□□□□ 0.89
UBE3D-208ENST00000626828 PDS5AQ29RF7 1337 aaKnown RBP20.59■□□□□ 0.89
UBE3D-208ENST00000626828 MYH13Q9UKX3 1938 aa20.59■□□□□ 0.89
UBE3D-208ENST00000626828 LDHBP07195 334 aaKnown RBP20.59■□□□□ 0.89
UBE3D-208ENST00000626828 UQCRFS1P1P0C7P4 283 aa20.59■□□□□ 0.89
UBE3D-208ENST00000626828 VEGFBP49765 207 aa20.59■□□□□ 0.89
UBE3D-208ENST00000626828 CCDC158Q5M9N0 1113 aa20.59■□□□□ 0.89
UBE3D-208ENST00000626828 SCAF8Q9UPN6 1271 aaKnown RBP20.59■□□□□ 0.89
UBE3D-208ENST00000626828 NF2P35240 595 aa20.58■□□□□ 0.89
UBE3D-208ENST00000626828 ECE1P42892 770 aa20.58■□□□□ 0.89
UBE3D-208ENST00000626828 RASGRF1Q13972 1273 aa20.58■□□□□ 0.89
UBE3D-208ENST00000626828 SPTY2D1Q68D10 685 aaPredicted RBP20.58■□□□□ 0.89
UBE3D-208ENST00000626828 ZDHHC15Q96MV8 337 aa20.58■□□□□ 0.89
UBE3D-208ENST00000626828 DEFB129Q9H1M3 183 aa20.58■□□□□ 0.89
UBE3D-208ENST00000626828 ZNF70Q9UC06 446 aaPredicted RBP20.58■□□□□ 0.89
UBE3D-208ENST00000626828 CLRN2A0PK11 232 aa20.57■□□□□ 0.88
UBE3D-208ENST00000626828 RAB11FIP3O75154 756 aa20.57■□□□□ 0.88
UBE3D-208ENST00000626828 FKBP1BP68106 108 aa20.57■□□□□ 0.88
UBE3D-208ENST00000626828 PRAMEF18Q5VWM3 479 aa20.57■□□□□ 0.88
UBE3D-208ENST00000626828 TDRD3Q9H7E2 651 aaKnown RBP20.57■□□□□ 0.88
UBE3D-208ENST00000626828 PPP2R3BQ9Y5P8 575 aa20.57■□□□□ 0.88
UBE3D-208ENST00000626828 ARID4AP29374 1257 aaPredicted RBP20.56■□□□□ 0.88
UBE3D-208ENST00000626828 HUNKP57058 714 aa20.56■□□□□ 0.88
UBE3D-208ENST00000626828 SPDYE2Q495Y8 402 aa20.56■□□□□ 0.88
UBE3D-208ENST00000626828 PAXIP1Q6ZW49 1069 aaPredicted RBP20.56■□□□□ 0.88
UBE3D-208ENST00000626828 SPATA5Q8NB90 893 aa20.56■□□□□ 0.88
UBE3D-208ENST00000626828 RHPN1Q8TCX5 695 aa20.56■□□□□ 0.88
UBE3D-208ENST00000626828 EAF2Q96CJ1 260 aaPredicted RBP20.56■□□□□ 0.88
UBE3D-208ENST00000626828 DBNDD2Q9BQY9 259 aa20.56■□□□□ 0.88
UBE3D-208ENST00000626828 VEZTQ9HBM0 779 aa20.56■□□□□ 0.88
UBE3D-208ENST00000626828 HMG20BQ9P0W2 317 aa20.56■□□□□ 0.88
UBE3D-208ENST00000626828 ABCF2Q9UG63 623 aa20.56■□□□□ 0.88
UBE3D-208ENST00000626828 WDR33Q9C0J8 1336 aaKnown RBP20.55■□□□□ 0.88
UBE3D-208ENST00000626828 PRDX5P30044 214 aa20.55■□□□□ 0.88
UBE3D-208ENST00000626828 TNFAIP1Q13829 316 aa20.55■□□□□ 0.88
UBE3D-208ENST00000626828 TTC39AQ5SRH9 613 aa20.55■□□□□ 0.88
UBE3D-208ENST00000626828 KIF1BPQ96EK5 621 aa20.55■□□□□ 0.88
UBE3D-208ENST00000626828 ZNF512BQ96KM6 892 aaPredicted RBP20.55■□□□□ 0.88
UBE3D-208ENST00000626828 CAPNS2Q96L46 248 aa20.55■□□□□ 0.88
UBE3D-208ENST00000626828 CCDC8Q9H0W5 538 aaPredicted RBP20.55■□□□□ 0.88
UBE3D-208ENST00000626828 ARAP2Q8WZ64 1704 aa20.55■□□□□ 0.88
UBE3D-208ENST00000626828 SUPT20HL1Q3ZLR7 823 aa20.54■□□□□ 0.88
UBE3D-208ENST00000626828 APOBEC3HQ6NTF7 200 aaKnown RBP20.54■□□□□ 0.88
UBE3D-208ENST00000626828 SLF2Q8IX21 1173 aa20.54■□□□□ 0.88
UBE3D-208ENST00000626828 CLASRPQ8N2M8 674 aaKnown RBP20.54■□□□□ 0.88
UBE3D-208ENST00000626828 ECM29Q5VYK3 1845 aa20.53■□□□□ 0.88
UBE3D-208ENST00000626828 TNNI2P48788 182 aa20.53■□□□□ 0.88
UBE3D-208ENST00000626828 RASA3Q14644 834 aa20.53■□□□□ 0.88
UBE3D-208ENST00000626828 CYP4F22Q6NT55 531 aa20.53■□□□□ 0.88
UBE3D-208ENST00000626828 ERICH6Q7L0X2 663 aa20.53■□□□□ 0.88
UBE3D-208ENST00000626828 TMOD2Q9NZR1 351 aa20.53■□□□□ 0.88
UBE3D-208ENST00000626828 COL1A1P02452 1464 aaPredicted RBP20.53■□□□□ 0.88
UBE3D-208ENST00000626828 AOX1Q06278 1338 aa20.53■□□□□ 0.88
UBE3D-208ENST00000626828 MCAMP43121 646 aa20.52■□□□□ 0.88
UBE3D-208ENST00000626828 TTLL12Q14166 644 aaPredicted RBP20.52■□□□□ 0.88
UBE3D-208ENST00000626828 FKBP1CQ5VVH2 108 aa20.52■□□□□ 0.88
UBE3D-208ENST00000626828 RGMBQ6NW40 437 aa20.52■□□□□ 0.88
UBE3D-208ENST00000626828 AACSQ86V21 672 aa20.52■□□□□ 0.88
UBE3D-208ENST00000626828 CCDC102AQ96A19 550 aa20.52■□□□□ 0.88
UBE3D-208ENST00000626828 FAM163AQ96GL9 167 aaPredicted RBP20.52■□□□□ 0.88
UBE3D-208ENST00000626828 DBNLQ9UJU6 430 aaKnown RBP20.52■□□□□ 0.88
UBE3D-208ENST00000626828 APBB1O00213 710 aa20.51■□□□□ 0.87
UBE3D-208ENST00000626828 MAP2K2P36507 400 aa20.51■□□□□ 0.87
UBE3D-208ENST00000626828 GRM1Q13255 1194 aa20.51■□□□□ 0.87
UBE3D-208ENST00000626828 DIXDC1Q155Q3 683 aa20.51■□□□□ 0.87
UBE3D-208ENST00000626828 ARMC9Q7Z3E5 817 aa20.51■□□□□ 0.87
UBE3D-208ENST00000626828 DZIP1Q86YF9 867 aaKnown RBP20.51■□□□□ 0.87
UBE3D-208ENST00000626828 IL1RAPL2Q9NP60 686 aa20.51■□□□□ 0.87
UBE3D-208ENST00000626828 TCP10L2B9ZVM9 353 aa20.5■□□□□ 0.87
UBE3D-208ENST00000626828 PPP1R12BO60237 982 aaPredicted RBP20.5■□□□□ 0.87
UBE3D-208ENST00000626828 LDHCP07864 332 aa20.5■□□□□ 0.87
UBE3D-208ENST00000626828 ZNF157P51786 506 aaPredicted RBP20.5■□□□□ 0.87
UBE3D-208ENST00000626828 PI16Q6UXB8 463 aa20.5■□□□□ 0.87
UBE3D-208ENST00000626828 SNRKQ9NRH2 765 aa20.5■□□□□ 0.87
UBE3D-208ENST00000626828 DAGLAQ9Y4D2 1042 aa20.5■□□□□ 0.87
UBE3D-208ENST00000626828 UBE2Q2LH0YL09 131 aa20.49■□□□□ 0.87
UBE3D-208ENST00000626828 IGSF3O75054 1194 aa20.49■□□□□ 0.87
UBE3D-208ENST00000626828 GSTO1P78417 241 aa20.49■□□□□ 0.87
UBE3D-208ENST00000626828 TBC1D9Q6ZT07 1266 aa20.49■□□□□ 0.87
UBE3D-208ENST00000626828 FAM83AQ86UY5 434 aa20.49■□□□□ 0.87
UBE3D-208ENST00000626828 DCTPP1Q9H773 170 aa20.49■□□□□ 0.87
UBE3D-208ENST00000626828 LRP2BPQ9P2M1 347 aa20.49■□□□□ 0.87
UBE3D-208ENST00000626828 IFIT2P09913 472 aaKnown RBP20.48■□□□□ 0.87
UBE3D-208ENST00000626828 MAP2K1Q02750 393 aaPredicted RBP20.48■□□□□ 0.87
UBE3D-208ENST00000626828 MECOMQ03112 1051 aa20.48■□□□□ 0.87
UBE3D-208ENST00000626828 NBPF12Q5TAG4 269 aaPredicted RBP20.48■□□□□ 0.87
UBE3D-208ENST00000626828 CDC42EP5Q6NZY7 148 aa20.48■□□□□ 0.87
UBE3D-208ENST00000626828 MOB2Q70IA6 237 aa20.48■□□□□ 0.87
UBE3D-208ENST00000626828 CRBNQ96SW2 442 aa20.48■□□□□ 0.87
UBE3D-208ENST00000626828 USP40Q9NVE5 1235 aa20.48■□□□□ 0.87
UBE3D-208ENST00000626828 TLR7Q9NYK1 1049 aaKnown RBP20.48■□□□□ 0.87
UBE3D-208ENST00000626828 RAI14Q9P0K7 980 aa20.48■□□□□ 0.87
UBE3D-208ENST00000626828 MYH2Q9UKX2 1941 aa20.47■□□□□ 0.87
UBE3D-208ENST00000626828 NOGQ13253 232 aa20.47■□□□□ 0.87
UBE3D-208ENST00000626828 AAMPQ13685 434 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 254.5 ms