RNA–Protein interactions for RNA: ENST00000625716.2

TCF4-249, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 359 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-249ENST00000625716 LYPD8Q6UX82 237 aa8.18□□□□□ -1.1
TCF4-249ENST00000625716 DDX46Q7L014 1031 aaKnown RBP8.18□□□□□ -1.1
TCF4-249ENST00000625716 TSPYL6Q8N831 410 aa8.18□□□□□ -1.1
TCF4-249ENST00000625716 EHBP1Q8NDI1 1231 aa8.18□□□□□ -1.1
TCF4-249ENST00000625716 ZNF428Q96B54 188 aa8.18□□□□□ -1.1
TCF4-249ENST00000625716 MYD88Q99836 296 aa8.18□□□□□ -1.1
TCF4-249ENST00000625716 LTBP3Q9NS15 1303 aa8.18□□□□□ -1.1
TCF4-249ENST00000625716 FANCIQ9NVI1 1328 aa8.18□□□□□ -1.1
TCF4-249ENST00000625716 RIC1Q4ADV7 1423 aa8.18□□□□□ -1.1
TCF4-249ENST00000625716 GLTPD2A6NH11 291 aa8.17□□□□□ -1.1
TCF4-249ENST00000625716 BBOX1O75936 387 aa8.17□□□□□ -1.1
TCF4-249ENST00000625716 EXOSC9Q06265 439 aaKnown RBP8.17□□□□□ -1.1
TCF4-249ENST00000625716 TRIM28Q13263 835 aaKnown RBP8.17□□□□□ -1.1
TCF4-249ENST00000625716 RTL5Q5HYW3 569 aaPredicted RBP8.17□□□□□ -1.1
TCF4-249ENST00000625716 LCE2CQ5TA81 110 aa8.17□□□□□ -1.1
TCF4-249ENST00000625716 KSR2Q6VAB6 950 aa8.17□□□□□ -1.1
TCF4-249ENST00000625716 CCDC191Q8NCU4 936 aa8.17□□□□□ -1.1
TCF4-249ENST00000625716 C7orf43Q8WVR3 580 aa8.17□□□□□ -1.1
TCF4-249ENST00000625716 JDP2Q8WYK2 163 aa8.17□□□□□ -1.1
TCF4-249ENST00000625716 FAM89AQ96GI7 184 aa8.17□□□□□ -1.1
TCF4-249ENST00000625716 ISCA1Q9BUE6 129 aa8.17□□□□□ -1.1
TCF4-249ENST00000625716 RRAGCQ9HB90 399 aa8.17□□□□□ -1.1
TCF4-249ENST00000625716 NMRK2Q9NPI5 230 aa8.17□□□□□ -1.1
TCF4-249ENST00000625716 MAP3K2Q9Y2U5 619 aa8.17□□□□□ -1.1
TCF4-249ENST00000625716 CCER2I3L3R5 266 aa8.16□□□□□ -1.1
TCF4-249ENST00000625716 IRS4O14654 1257 aaPredicted RBP8.16□□□□□ -1.1
TCF4-249ENST00000625716 TOMM70O94826 608 aa8.16□□□□□ -1.1
TCF4-249ENST00000625716 COL11A2P13942 1736 aaPredicted RBP8.16□□□□□ -1.1
TCF4-249ENST00000625716 PDE4DQ08499 809 aa8.16□□□□□ -1.1
TCF4-249ENST00000625716 NFX1Q12986 1120 aaKnown RBP8.16□□□□□ -1.1
TCF4-249ENST00000625716 OLFM4Q6UX06 510 aa8.16□□□□□ -1.1
TCF4-249ENST00000625716 SYNE4Q8N205 404 aa8.16□□□□□ -1.1
TCF4-249ENST00000625716 TRIM47Q96LD4 638 aa8.16□□□□□ -1.1
TCF4-249ENST00000625716 METTL22Q9BUU2 404 aaPredicted RBP8.16□□□□□ -1.1
TCF4-249ENST00000625716 SLC24A3Q9HC58 644 aa8.16□□□□□ -1.1
TCF4-249ENST00000625716 ZNF277Q9NRM2 450 aaPredicted RBP8.16□□□□□ -1.1
TCF4-249ENST00000625716 CWC25Q9NXE8 425 aaPredicted RBP8.16□□□□□ -1.1
TCF4-249ENST00000625716 UTRNP46939 3433 aa8.15□□□□□ -1.1
TCF4-249ENST00000625716 PI4KAP2A4QPH2 592 aa8.15□□□□□ -1.1
TCF4-249ENST00000625716 VAMP4O75379 141 aa8.15□□□□□ -1.1
TCF4-249ENST00000625716 VEGFAP15692 232 aaPredicted RBP8.15□□□□□ -1.1
TCF4-249ENST00000625716 IARSP41252 1262 aaKnown RBP8.15□□□□□ -1.1
TCF4-249ENST00000625716 PRELPP51888 382 aa8.15□□□□□ -1.1
TCF4-249ENST00000625716 FKBP5Q13451 457 aaPredicted RBP8.15□□□□□ -1.1
TCF4-249ENST00000625716 TMC4Q7Z404 712 aa8.15□□□□□ -1.1
TCF4-249ENST00000625716 PI4KAP1Q8N8J0 262 aa8.15□□□□□ -1.1
TCF4-249ENST00000625716 ZBTB38Q8NAP3 1195 aaPredicted RBP8.15□□□□□ -1.1
TCF4-249ENST00000625716 ZNF511Q8NB15 262 aa8.15□□□□□ -1.1
TCF4-249ENST00000625716 SUPT20HQ8NEM7 779 aa8.15□□□□□ -1.1
TCF4-249ENST00000625716 PSMD1Q99460 953 aa8.15□□□□□ -1.1
TCF4-249ENST00000625716 LIMD1Q9UGP4 676 aa8.15□□□□□ -1.1
TCF4-249ENST00000625716 ATP6V0A2Q9Y487 856 aa8.15□□□□□ -1.1
TCF4-249ENST00000625716 SLX4Q8IY92 1834 aa8.15□□□□□ -1.11
TCF4-249ENST00000625716 ABCC4O15439 1325 aa8.14□□□□□ -1.11
TCF4-249ENST00000625716 F12P00748 615 aaPredicted RBP8.14□□□□□ -1.11
TCF4-249ENST00000625716 PCCAP05165 728 aaPredicted RBP8.14□□□□□ -1.11
TCF4-249ENST00000625716 FLIIQ13045 1269 aa8.14□□□□□ -1.11
TCF4-249ENST00000625716 GRAPQ13588 217 aa8.14□□□□□ -1.11
TCF4-249ENST00000625716 SF3B3Q15393 1217 aaKnown RBP8.14□□□□□ -1.11
TCF4-249ENST00000625716 DIXDC1Q155Q3 683 aa8.14□□□□□ -1.11
TCF4-249ENST00000625716 CCDC152Q4G0S7 254 aa8.14□□□□□ -1.11
TCF4-249ENST00000625716 DPP8Q6V1X1 898 aaPredicted RBP8.14□□□□□ -1.11
TCF4-249ENST00000625716 TRIM46Q7Z4K8 759 aa8.14□□□□□ -1.11
TCF4-249ENST00000625716 SP8Q8IXZ3 490 aa8.14□□□□□ -1.11
TCF4-249ENST00000625716 LARGE2Q8N3Y3 721 aa8.14□□□□□ -1.11
TCF4-249ENST00000625716 MPNDQ8N594 471 aa8.14□□□□□ -1.11
TCF4-249ENST00000625716 GRAPLQ8TC17 118 aaPredicted RBP8.14□□□□□ -1.11
TCF4-249ENST00000625716 TLL2Q9Y6L7 1015 aa8.14□□□□□ -1.11
TCF4-249ENST00000625716 E9PSI1 815 aa8.13□□□□□ -1.11
TCF4-249ENST00000625716 PDE8AO60658 829 aa8.13□□□□□ -1.11
TCF4-249ENST00000625716 EIF6P56537 245 aaKnown RBP8.13□□□□□ -1.11
TCF4-249ENST00000625716 QPCTQ16769 361 aa8.13□□□□□ -1.11
TCF4-249ENST00000625716 PRPF38BQ5VTL8 546 aaKnown RBP8.13□□□□□ -1.11
TCF4-249ENST00000625716 MYSM1Q5VVJ2 828 aa8.13□□□□□ -1.11
TCF4-249ENST00000625716 DIEXFQ68CQ4 756 aaKnown RBP8.13□□□□□ -1.11
TCF4-249ENST00000625716 G2E3Q7L622 706 aa8.13□□□□□ -1.11
TCF4-249ENST00000625716 SMC1BQ8NDV3 1235 aa8.13□□□□□ -1.11
TCF4-249ENST00000625716 DNAAF4Q8WXU2 420 aa8.13□□□□□ -1.11
TCF4-249ENST00000625716 VPS33BQ9H267 617 aa8.13□□□□□ -1.11
TCF4-249ENST00000625716 MAP10Q9P2G4 905 aa8.13□□□□□ -1.11
TCF4-249ENST00000625716 TNRC6CQ9HCJ0 1690 aaKnown RBP8.13□□□□□ -1.11
TCF4-249ENST00000625716 ANKRD36CQ5JPF3 1778 aa8.12□□□□□ -1.11
TCF4-249ENST00000625716 ARFGEF2Q9Y6D5 1785 aa8.12□□□□□ -1.11
TCF4-249ENST00000625716 IQCA1LA6NCM1 817 aa8.12□□□□□ -1.11
TCF4-249ENST00000625716 PPIP5K2O43314 1243 aa8.12□□□□□ -1.11
TCF4-249ENST00000625716 WFS1O76024 890 aa8.12□□□□□ -1.11
TCF4-249ENST00000625716 DDNO94850 711 aaPredicted RBP8.12□□□□□ -1.11
TCF4-249ENST00000625716 HSPA6P17066 643 aa8.12□□□□□ -1.11
TCF4-249ENST00000625716 RPS8P62241 208 aaKnown RBP8.12□□□□□ -1.11
TCF4-249ENST00000625716 FSTL1Q12841 308 aa8.12□□□□□ -1.11
TCF4-249ENST00000625716 CSPP1Q1MSJ5 1256 aa8.12□□□□□ -1.11
TCF4-249ENST00000625716 NIM1KQ8IY84 436 aa8.12□□□□□ -1.11
TCF4-249ENST00000625716 JARID2Q92833 1246 aaPredicted RBP8.12□□□□□ -1.11
TCF4-249ENST00000625716 CACNA1SQ13698 1873 aa8.12□□□□□ -1.11
TCF4-249ENST00000625716 GOLGB1Q14789 3259 aaKnown RBP8.12□□□□□ -1.11
TCF4-249ENST00000625716 SBF1O95248 1867 aa8.11□□□□□ -1.11
TCF4-249ENST00000625716 FER1L6Q2WGJ9 1857 aa8.11□□□□□ -1.11
TCF4-249ENST00000625716 CDHR2Q9BYE9 1310 aa8.11□□□□□ -1.11
TCF4-249ENST00000625716 NEURL1BA8MQ27 555 aa8.11□□□□□ -1.11
TCF4-249ENST00000625716 FZD9O00144 591 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms