RNA–Protein interactions for RNA: ENST00000625299.1

PNKP-218, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 428 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-218ENST00000625299 OTUD5Q96G74 571 aa18.65■□□□□ 0.58
PNKP-218ENST00000625299 TMEM39BQ9GZU3 492 aa18.65■□□□□ 0.58
PNKP-218ENST00000625299 CSADQ9Y600 493 aa18.65■□□□□ 0.58
PNKP-218ENST00000625299 GYG1P46976 350 aa18.64■□□□□ 0.57
PNKP-218ENST00000625299 GTF2A2P52657 109 aa18.64■□□□□ 0.57
PNKP-218ENST00000625299 EPHA10Q5JZY3 1008 aa18.64■□□□□ 0.57
PNKP-218ENST00000625299 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.64■□□□□ 0.57
PNKP-218ENST00000625299 DZIP1LQ8IYY4 767 aaKnown RBP18.64■□□□□ 0.57
PNKP-218ENST00000625299 FAM43AQ8N2R8 423 aa18.64■□□□□ 0.57
PNKP-218ENST00000625299 SERPINA10Q9UK55 444 aa18.64■□□□□ 0.57
PNKP-218ENST00000625299 ZSWIM8A7E2V4 1837 aa18.64■□□□□ 0.57
PNKP-218ENST00000625299 FAM205AQ6ZU69 1335 aa18.64■□□□□ 0.57
PNKP-218ENST00000625299 TNNI2P48788 182 aa18.63■□□□□ 0.57
PNKP-218ENST00000625299 MAP3K9P80192 1104 aa18.63■□□□□ 0.57
PNKP-218ENST00000625299 CCDC27Q2M243 656 aa18.63■□□□□ 0.57
PNKP-218ENST00000625299 TEPSINQ96N21 525 aa18.63■□□□□ 0.57
PNKP-218ENST00000625299 COLQQ9Y215 455 aaPredicted RBP18.63■□□□□ 0.57
PNKP-218ENST00000625299 FANCIQ9NVI1 1328 aa18.63■□□□□ 0.57
PNKP-218ENST00000625299 ECM2O94769 699 aaPredicted RBP18.62■□□□□ 0.57
PNKP-218ENST00000625299 HIBADHP31937 336 aaKnown RBP18.62■□□□□ 0.57
PNKP-218ENST00000625299 CRKP46108 304 aa18.62■□□□□ 0.57
PNKP-218ENST00000625299 BEND3Q5T5X7 828 aa18.62■□□□□ 0.57
PNKP-218ENST00000625299 TDRD7Q8NHU6 1098 aaKnown RBP18.62■□□□□ 0.57
PNKP-218ENST00000625299 SH3TC2Q8TF17 1288 aa18.62■□□□□ 0.57
PNKP-218ENST00000625299 IL16Q14005 1332 aa18.61■□□□□ 0.57
PNKP-218ENST00000625299 WDHD1O75717 1129 aaPredicted RBP18.61■□□□□ 0.57
PNKP-218ENST00000625299 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.61■□□□□ 0.57
PNKP-218ENST00000625299 ARHGAP39Q9C0H5 1083 aa18.61■□□□□ 0.57
PNKP-218ENST00000625299 IQSEC3Q9UPP2 1182 aaPredicted RBP18.61■□□□□ 0.57
PNKP-218ENST00000625299 GRM8O00222 908 aa18.6■□□□□ 0.57
PNKP-218ENST00000625299 CACNB3P54284 484 aa18.6■□□□□ 0.57
PNKP-218ENST00000625299 CHAF1AQ13111 956 aaPredicted RBP18.6■□□□□ 0.57
PNKP-218ENST00000625299 KIF22Q14807 665 aa18.6■□□□□ 0.57
PNKP-218ENST00000625299 CCDC184Q52MB2 194 aa18.6■□□□□ 0.57
PNKP-218ENST00000625299 C9orf78Q9NZ63 289 aaPredicted RBP18.6■□□□□ 0.57
PNKP-218ENST00000625299 SALL2Q9Y467 1007 aaPredicted RBP18.6■□□□□ 0.57
PNKP-218ENST00000625299 CEP290O15078 2479 aa18.6■□□□□ 0.57
PNKP-218ENST00000625299 VAMP4O75379 141 aa18.59■□□□□ 0.57
PNKP-218ENST00000625299 UBE4AQ14139 1066 aa18.59■□□□□ 0.57
PNKP-218ENST00000625299 GRIK5Q16478 980 aa18.59■□□□□ 0.57
PNKP-218ENST00000625299 VPS37DQ86XT2 251 aa18.59■□□□□ 0.57
PNKP-218ENST00000625299 FAM84BQ96KN1 310 aaPredicted RBP18.59■□□□□ 0.57
PNKP-218ENST00000625299 SPDYE5A6NIY4 337 aa18.58■□□□□ 0.56
PNKP-218ENST00000625299 EXOSC9Q06265 439 aaKnown RBP18.58■□□□□ 0.56
PNKP-218ENST00000625299 WRNIP1Q96S55 665 aa18.58■□□□□ 0.56
PNKP-218ENST00000625299 PUS3Q9BZE2 481 aaKnown RBP18.58■□□□□ 0.56
PNKP-218ENST00000625299 H0YGN5 161 aa18.57■□□□□ 0.56
PNKP-218ENST00000625299 TLR2O60603 784 aa18.57■□□□□ 0.56
PNKP-218ENST00000625299 FRAT2O75474 233 aaPredicted RBP18.57■□□□□ 0.56
PNKP-218ENST00000625299 CETPP11597 493 aa18.57■□□□□ 0.56
PNKP-218ENST00000625299 SLC4A10Q6U841 1118 aa18.57■□□□□ 0.56
PNKP-218ENST00000625299 TMOD2Q9NZR1 351 aa18.57■□□□□ 0.56
PNKP-218ENST00000625299 SNCAIPQ9Y6H5 919 aa18.57■□□□□ 0.56
PNKP-218ENST00000625299 TRIOBPQ9H2D6 2365 aa18.57■□□□□ 0.56
PNKP-218ENST00000625299 BTBD19C9JJ37 291 aa18.56■□□□□ 0.56
PNKP-218ENST00000625299 LACTBP83111 547 aaPredicted RBP18.56■□□□□ 0.56
PNKP-218ENST00000625299 ERO1BQ86YB8 467 aa18.56■□□□□ 0.56
PNKP-218ENST00000625299 ZKSCAN4Q969J2 545 aaPredicted RBP18.56■□□□□ 0.56
PNKP-218ENST00000625299 IRF6O14896 467 aa18.55■□□□□ 0.56
PNKP-218ENST00000625299 SNAPC2Q13487 334 aa18.55■□□□□ 0.56
PNKP-218ENST00000625299 TEKT1Q969V4 418 aa18.55■□□□□ 0.56
PNKP-218ENST00000625299 SUCLG2Q96I99 432 aa18.55■□□□□ 0.56
PNKP-218ENST00000625299 CHRDL2Q6WN34 429 aa18.54■□□□□ 0.56
PNKP-218ENST00000625299 TBC1D22AQ8WUA7 517 aa18.54■□□□□ 0.56
PNKP-218ENST00000625299 MROH5Q6ZUA9 1318 aa18.53■□□□□ 0.56
PNKP-218ENST00000625299 CAVIN4Q5BKX8 364 aa18.53■□□□□ 0.56
PNKP-218ENST00000625299 DPF3Q92784 378 aa18.53■□□□□ 0.56
PNKP-218ENST00000625299 SRCIN1Q9C0H9 1055 aa18.53■□□□□ 0.56
PNKP-218ENST00000625299 CPA4Q9UI42 421 aa18.53■□□□□ 0.56
PNKP-218ENST00000625299 ALDH1L1O75891 902 aa18.52■□□□□ 0.56
PNKP-218ENST00000625299 HDLBPQ00341 1268 aaKnown RBP18.52■□□□□ 0.56
PNKP-218ENST00000625299 PPIL2Q13356 520 aa18.52■□□□□ 0.56
PNKP-218ENST00000625299 MTFR1Q15390 333 aa18.52■□□□□ 0.56
PNKP-218ENST00000625299 METTL24Q5JXM2 366 aa18.52■□□□□ 0.56
PNKP-218ENST00000625299 FBXO33Q7Z6M2 555 aa18.52■□□□□ 0.56
PNKP-218ENST00000625299 HOOK2Q96ED9 719 aa18.52■□□□□ 0.56
PNKP-218ENST00000625299 ZCCHC17Q9NP64 241 aaKnown RBP18.52■□□□□ 0.56
PNKP-218ENST00000625299 SZT2Q5T011 3432 aa18.51■□□□□ 0.55
PNKP-218ENST00000625299 GNRH1P01148 92 aa18.51■□□□□ 0.55
PNKP-218ENST00000625299 PRMT2P55345 433 aa18.51■□□□□ 0.55
PNKP-218ENST00000625299 DCAF15Q66K64 600 aa18.51■□□□□ 0.55
PNKP-218ENST00000625299 MIGA2Q7L4E1 593 aa18.51■□□□□ 0.55
PNKP-218ENST00000625299 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.51■□□□□ 0.55
PNKP-218ENST00000625299 RIPOR2Q9Y4F9 1068 aa18.51■□□□□ 0.55
PNKP-218ENST00000625299 AK9Q5TCS8 1911 aa18.51■□□□□ 0.55
PNKP-218ENST00000625299 PSMC4P43686 418 aa18.5■□□□□ 0.55
PNKP-218ENST00000625299 LRRC24Q50LG9 513 aa18.5■□□□□ 0.55
PNKP-218ENST00000625299 FAM83AQ86UY5 434 aa18.5■□□□□ 0.55
PNKP-218ENST00000625299 WDR63Q8IWG1 891 aa18.5■□□□□ 0.55
PNKP-218ENST00000625299 RAET1EQ8TD07 263 aa18.5■□□□□ 0.55
PNKP-218ENST00000625299 SHISA4Q96DD7 197 aa18.5■□□□□ 0.55
PNKP-218ENST00000625299 KAZALD1Q96I82 304 aa18.5■□□□□ 0.55
PNKP-218ENST00000625299 ZDHHC15Q96MV8 337 aa18.5■□□□□ 0.55
PNKP-218ENST00000625299 ZNF341Q9BYN7 854 aa18.5■□□□□ 0.55
PNKP-218ENST00000625299 FMNL1O95466 1100 aaPredicted RBP18.49■□□□□ 0.55
PNKP-218ENST00000625299 NBPF7P0C2Y1 421 aaPredicted RBP18.49■□□□□ 0.55
PNKP-218ENST00000625299 CTGFP29279 349 aa18.49■□□□□ 0.55
PNKP-218ENST00000625299 INPP5BP32019 993 aa18.49■□□□□ 0.55
PNKP-218ENST00000625299 BCAMP50895 628 aa18.49■□□□□ 0.55
PNKP-218ENST00000625299 PPATQ06203 517 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms