RNA–Protein interactions for RNA: ENST00000625245.2

SMN1-211, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN1, Length 885 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-211ENST00000625245 CAVIN4Q5BKX8 364 aa23.86■■□□□ 1.41
SMN1-211ENST00000625245 FBXO33Q7Z6M2 555 aa23.86■■□□□ 1.41
SMN1-211ENST00000625245 CDAN1Q8IWY9 1227 aa23.86■■□□□ 1.41
SMN1-211ENST00000625245 ARAP2Q8WZ64 1704 aa23.86■■□□□ 1.41
SMN1-211ENST00000625245 OTOFQ9HC10 1997 aa23.85■■□□□ 1.41
SMN1-211ENST00000625245 TNNI2P48788 182 aa23.85■■□□□ 1.41
SMN1-211ENST00000625245 CRHR2Q13324 411 aa23.85■■□□□ 1.41
SMN1-211ENST00000625245 GRIK5Q16478 980 aa23.85■■□□□ 1.41
SMN1-211ENST00000625245 RABL6Q3YEC7 729 aaPredicted RBP23.85■■□□□ 1.41
SMN1-211ENST00000625245 ANKRD44Q8N8A2 993 aa23.85■■□□□ 1.41
SMN1-211ENST00000625245 OPTNQ96CV9 577 aa23.85■■□□□ 1.41
SMN1-211ENST00000625245 TMEM39BQ9GZU3 492 aa23.85■■□□□ 1.41
SMN1-211ENST00000625245 LAMB1P07942 1786 aa23.85■■□□□ 1.41
SMN1-211ENST00000625245 OTOP1Q7RTM1 612 aa23.84■■□□□ 1.41
SMN1-211ENST00000625245 KLHDC4Q8TBB5 520 aa23.84■■□□□ 1.41
SMN1-211ENST00000625245 TEPSINQ96N21 525 aa23.84■■□□□ 1.41
SMN1-211ENST00000625245 CD99L2Q8TCZ2 262 aa23.83■■□□□ 1.41
SMN1-211ENST00000625245 TBC1D22AQ8WUA7 517 aa23.83■■□□□ 1.41
SMN1-211ENST00000625245 ERO1AQ96HE7 468 aa23.83■■□□□ 1.41
SMN1-211ENST00000625245 PTPN18Q99952 460 aa23.83■■□□□ 1.41
SMN1-211ENST00000625245 ZNF521Q96K83 1311 aa23.83■■□□□ 1.4
SMN1-211ENST00000625245 PDE8BO95263 885 aa23.82■■□□□ 1.4
SMN1-211ENST00000625245 BCAMP50895 628 aa23.82■■□□□ 1.4
SMN1-211ENST00000625245 PRPF38BQ5VTL8 546 aaKnown RBP23.82■■□□□ 1.4
SMN1-211ENST00000625245 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.82■■□□□ 1.4
SMN1-211ENST00000625245 TESPA1A2RU30 521 aaPredicted RBP23.81■■□□□ 1.4
SMN1-211ENST00000625245 CACNB3P54284 484 aa23.81■■□□□ 1.4
SMN1-211ENST00000625245 MAP3K9P80192 1104 aa23.81■■□□□ 1.4
SMN1-211ENST00000625245 CNKSR2Q8WXI2 1034 aa23.81■■□□□ 1.4
SMN1-211ENST00000625245 TEKT1Q969V4 418 aa23.81■■□□□ 1.4
SMN1-211ENST00000625245 PTPRCP08575 1304 aa23.81■■□□□ 1.4
SMN1-211ENST00000625245 HDLBPQ00341 1268 aaKnown RBP23.8■■□□□ 1.4
SMN1-211ENST00000625245 VGLL2Q8N8G2 317 aa23.8■■□□□ 1.4
SMN1-211ENST00000625245 SSH1Q8WYL5 1049 aa23.8■■□□□ 1.4
SMN1-211ENST00000625245 CSADQ9Y600 493 aa23.8■■□□□ 1.4
SMN1-211ENST00000625245 SP3Q02447 781 aa23.79■■□□□ 1.4
SMN1-211ENST00000625245 VGLL4Q14135 290 aa23.79■■□□□ 1.4
SMN1-211ENST00000625245 MS4A4AQ96JQ5 239 aa23.79■■□□□ 1.4
SMN1-211ENST00000625245 USP44Q9H0E7 712 aa23.79■■□□□ 1.4
SMN1-211ENST00000625245 EFCC1Q9HA90 598 aa23.79■■□□□ 1.4
SMN1-211ENST00000625245 CCL15-CCL14A0A0B4J2E2 113 aa23.78■■□□□ 1.4
SMN1-211ENST00000625245 E9PSI1 815 aa23.78■■□□□ 1.4
SMN1-211ENST00000625245 IFIT1P09914 478 aaKnown RBP23.78■■□□□ 1.4
SMN1-211ENST00000625245 CCL15Q16663 113 aa23.78■■□□□ 1.4
SMN1-211ENST00000625245 OTUD5Q96G74 571 aa23.78■■□□□ 1.4
SMN1-211ENST00000625245 TMOD2Q9NZR1 351 aa23.78■■□□□ 1.4
SMN1-211ENST00000625245 PTPN22Q9Y2R2 807 aa23.78■■□□□ 1.4
SMN1-211ENST00000625245 GTF2A2P52657 109 aa23.77■■□□□ 1.4
SMN1-211ENST00000625245 PUM3Q15397 648 aaKnown RBP23.77■■□□□ 1.4
SMN1-211ENST00000625245 INTS3Q68E01 1043 aaKnown RBP23.77■■□□□ 1.4
SMN1-211ENST00000625245 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.77■■□□□ 1.4
SMN1-211ENST00000625245 BRI3BPQ8WY22 251 aa23.77■■□□□ 1.4
SMN1-211ENST00000625245 TAF1CQ15572 869 aaPredicted RBP23.76■■□□□ 1.39
SMN1-211ENST00000625245 ZDHHC15Q96MV8 337 aa23.76■■□□□ 1.39
SMN1-211ENST00000625245 MYH13Q9UKX3 1938 aa23.75■■□□□ 1.39
SMN1-211ENST00000625245 ZFYVE28Q9HCC9 887 aa23.75■■□□□ 1.39
SMN1-211ENST00000625245 MAST3O60307 1309 aa23.75■■□□□ 1.39
SMN1-211ENST00000625245 KIAA0100Q14667 2235 aaKnown RBP23.74■■□□□ 1.39
SMN1-211ENST00000625245 POTEFA5A3E0 1075 aa23.74■■□□□ 1.39
SMN1-211ENST00000625245 EYA2O00167 538 aa23.74■■□□□ 1.39
SMN1-211ENST00000625245 SLC5A1P13866 664 aa23.74■■□□□ 1.39
SMN1-211ENST00000625245 FGFR2P21802 821 aa23.74■■□□□ 1.39
SMN1-211ENST00000625245 MRIQ9BWK5 157 aa23.74■■□□□ 1.39
SMN1-211ENST00000625245 AK9Q5TCS8 1911 aa23.73■■□□□ 1.39
SMN1-211ENST00000625245 CAP1Q01518 475 aa23.73■■□□□ 1.39
SMN1-211ENST00000625245 APOBEC3HQ6NTF7 200 aaKnown RBP23.73■■□□□ 1.39
SMN1-211ENST00000625245 FAM43AQ8N2R8 423 aa23.73■■□□□ 1.39
SMN1-211ENST00000625245 WRNIP1Q96S55 665 aa23.73■■□□□ 1.39
SMN1-211ENST00000625245 SUGT1Q9Y2Z0 365 aa23.73■■□□□ 1.39
SMN1-211ENST00000625245 SPDYE5A6NIY4 337 aa23.72■■□□□ 1.39
SMN1-211ENST00000625245 RFX5P48382 616 aaPredicted RBP23.72■■□□□ 1.39
SMN1-211ENST00000625245 SLFN5Q08AF3 891 aa23.72■■□□□ 1.39
SMN1-211ENST00000625245 HHIPL2Q6UWX4 724 aa23.72■■□□□ 1.39
SMN1-211ENST00000625245 FAM83AQ86UY5 434 aa23.72■■□□□ 1.39
SMN1-211ENST00000625245 ZKSCAN4Q969J2 545 aaPredicted RBP23.72■■□□□ 1.39
SMN1-211ENST00000625245 HOOK2Q96ED9 719 aa23.72■■□□□ 1.39
SMN1-211ENST00000625245 SNCAIPQ9Y6H5 919 aa23.72■■□□□ 1.39
SMN1-211ENST00000625245 KIF16BQ96L93 1317 aa23.71■■□□□ 1.39
SMN1-211ENST00000625245 ARHGEF6Q15052 776 aa23.71■■□□□ 1.39
SMN1-211ENST00000625245 ERO1BQ86YB8 467 aa23.71■■□□□ 1.39
SMN1-211ENST00000625245 WDR66Q8TBY9 1149 aa23.71■■□□□ 1.39
SMN1-211ENST00000625245 LPIN2Q92539 896 aa23.71■■□□□ 1.39
SMN1-211ENST00000625245 SMC4Q9NTJ3 1288 aa23.71■■□□□ 1.39
SMN1-211ENST00000625245 WDHD1O75717 1129 aaPredicted RBP23.7■■□□□ 1.38
SMN1-211ENST00000625245 CETPP11597 493 aa23.7■■□□□ 1.38
SMN1-211ENST00000625245 FKBP1CQ5VVH2 108 aa23.7■■□□□ 1.38
SMN1-211ENST00000625245 DCAF15Q66K64 600 aa23.7■■□□□ 1.38
SMN1-211ENST00000625245 MIGA2Q7L4E1 593 aa23.7■■□□□ 1.38
SMN1-211ENST00000625245 SIL1Q9H173 461 aa23.7■■□□□ 1.38
SMN1-211ENST00000625245 ALDH1L2Q3SY69 923 aa23.69■■□□□ 1.38
SMN1-211ENST00000625245 ARMC5Q96C12 935 aa23.69■■□□□ 1.38
SMN1-211ENST00000625245 CDCA7LQ96GN5 454 aa23.69■■□□□ 1.38
SMN1-211ENST00000625245 ATG9AQ7Z3C6 839 aa23.68■■□□□ 1.38
SMN1-211ENST00000625245 IRF6O14896 467 aa23.67■■□□□ 1.38
SMN1-211ENST00000625245 UBTFL1P0CB47 393 aaPredicted RBP23.67■■□□□ 1.38
SMN1-211ENST00000625245 EN2P19622 333 aaPredicted RBP23.67■■□□□ 1.38
SMN1-211ENST00000625245 TCP10Q12799 353 aa23.67■■□□□ 1.38
SMN1-211ENST00000625245 SNAPC2Q13487 334 aa23.67■■□□□ 1.38
SMN1-211ENST00000625245 TMEM106CQ9BVX2 250 aa23.67■■□□□ 1.38
SMN1-211ENST00000625245 ZNF341Q9BYN7 854 aa23.67■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms