RNA–Protein interactions for RNA: ENST00000625244.2

SNX1-214, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-214ENST00000625244 HOXD10P28358 340 aa17.97■□□□□ 0.47
SNX1-214ENST00000625244 IGHMBP2P38935 993 aaKnown RBP17.97■□□□□ 0.47
SNX1-214ENST00000625244 SPDYE2Q495Y8 402 aa17.97■□□□□ 0.47
SNX1-214ENST00000625244 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.97■□□□□ 0.47
SNX1-214ENST00000625244 METTL22Q9BUU2 404 aaPredicted RBP17.97■□□□□ 0.47
SNX1-214ENST00000625244 ANKRD2Q9GZV1 360 aa17.97■□□□□ 0.47
SNX1-214ENST00000625244 ZNF70Q9UC06 446 aaPredicted RBP17.97■□□□□ 0.47
SNX1-214ENST00000625244 MYPNQ86TC9 1320 aa17.97■□□□□ 0.47
SNX1-214ENST00000625244 IRS2Q9Y4H2 1338 aa17.97■□□□□ 0.47
SNX1-214ENST00000625244 IRF6O14896 467 aa17.96■□□□□ 0.47
SNX1-214ENST00000625244 SGPL1O95470 568 aa17.96■□□□□ 0.47
SNX1-214ENST00000625244 BMP8BP34820 402 aa17.96■□□□□ 0.47
SNX1-214ENST00000625244 UBXN2AP68543 259 aa17.96■□□□□ 0.47
SNX1-214ENST00000625244 TNFAIP1Q13829 316 aa17.96■□□□□ 0.47
SNX1-214ENST00000625244 NEUROD2Q15784 382 aa17.96■□□□□ 0.47
SNX1-214ENST00000625244 TMEM39BQ9GZU3 492 aa17.96■□□□□ 0.47
SNX1-214ENST00000625244 KCNJ4P48050 445 aa17.95■□□□□ 0.46
SNX1-214ENST00000625244 HELBQ8NG08 1087 aaPredicted RBP17.95■□□□□ 0.46
SNX1-214ENST00000625244 TDRD3Q9H7E2 651 aaKnown RBP17.95■□□□□ 0.46
SNX1-214ENST00000625244 SNCAIPQ9Y6H5 919 aa17.95■□□□□ 0.46
SNX1-214ENST00000625244 FKBP1AP62942 108 aaKnown RBP17.94■□□□□ 0.46
SNX1-214ENST00000625244 PRKCZQ05513 592 aa17.94■□□□□ 0.46
SNX1-214ENST00000625244 CHRNDQ07001 517 aa17.94■□□□□ 0.46
SNX1-214ENST00000625244 SNAPC2Q13487 334 aa17.94■□□□□ 0.46
SNX1-214ENST00000625244 LRIT3Q3SXY7 679 aa17.94■□□□□ 0.46
SNX1-214ENST00000625244 TTC28Q96AY4 2481 aa17.94■□□□□ 0.46
SNX1-214ENST00000625244 TCP10L2B9ZVM9 353 aa17.93■□□□□ 0.46
SNX1-214ENST00000625244 IGKV5-2P06315 115 aa17.93■□□□□ 0.46
SNX1-214ENST00000625244 IL1R1P14778 569 aa17.93■□□□□ 0.46
SNX1-214ENST00000625244 BCAMP50895 628 aa17.93■□□□□ 0.46
SNX1-214ENST00000625244 ERO1BQ86YB8 467 aa17.93■□□□□ 0.46
SNX1-214ENST00000625244 TRIM35Q9UPQ4 493 aa17.93■□□□□ 0.46
SNX1-214ENST00000625244 ADGRA2Q96PE1 1338 aa17.93■□□□□ 0.46
SNX1-214ENST00000625244 TFRCP02786 760 aaKnown RBP17.92■□□□□ 0.46
SNX1-214ENST00000625244 ITGA6P23229 1130 aa17.92■□□□□ 0.46
SNX1-214ENST00000625244 ZKSCAN4Q969J2 545 aaPredicted RBP17.92■□□□□ 0.46
SNX1-214ENST00000625244 MPHOSPH8Q99549 860 aa17.92■□□□□ 0.46
SNX1-214ENST00000625244 ZMYND8Q9ULU4 1186 aaPredicted RBP17.92■□□□□ 0.46
SNX1-214ENST00000625244 TAF5LO75529 589 aa17.91■□□□□ 0.46
SNX1-214ENST00000625244 PPIL2Q13356 520 aa17.91■□□□□ 0.46
SNX1-214ENST00000625244 C15orf52Q6ZUT6 534 aaKnown RBP17.91■□□□□ 0.46
SNX1-214ENST00000625244 SLAIN1Q8ND83 568 aa17.91■□□□□ 0.46
SNX1-214ENST00000625244 PAWRQ96IZ0 340 aaKnown RBP17.91■□□□□ 0.46
SNX1-214ENST00000625244 DEFB118Q96PH6 123 aa17.91■□□□□ 0.46
SNX1-214ENST00000625244 GABRQQ9UN88 632 aa17.91■□□□□ 0.46
SNX1-214ENST00000625244 MAP3K2Q9Y2U5 619 aa17.91■□□□□ 0.46
SNX1-214ENST00000625244 PDHXO00330 501 aa17.9■□□□□ 0.46
SNX1-214ENST00000625244 DZIP1LQ8IYY4 767 aaKnown RBP17.9■□□□□ 0.46
SNX1-214ENST00000625244 WRNIP1Q96S55 665 aa17.9■□□□□ 0.46
SNX1-214ENST00000625244 PRDM6Q9NQX0 595 aa17.9■□□□□ 0.46
SNX1-214ENST00000625244 ZNF804AQ7Z570 1209 aa17.89■□□□□ 0.45
SNX1-214ENST00000625244 CCDC146Q8IYE0 955 aa17.89■□□□□ 0.45
SNX1-214ENST00000625244 C7orf61Q8IZ16 206 aa17.89■□□□□ 0.45
SNX1-214ENST00000625244 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.89■□□□□ 0.45
SNX1-214ENST00000625244 DIS3LQ8TF46 1054 aaKnown RBP17.89■□□□□ 0.45
SNX1-214ENST00000625244 MBIPQ9NS73 344 aa17.89■□□□□ 0.45
SNX1-214ENST00000625244 SERPINA10Q9UK55 444 aa17.89■□□□□ 0.45
SNX1-214ENST00000625244 MYH3P11055 1940 aa17.89■□□□□ 0.45
SNX1-214ENST00000625244 ALPK3Q96L96 1907 aa17.89■□□□□ 0.45
SNX1-214ENST00000625244 CDH23Q9H251 3354 aa17.88■□□□□ 0.45
SNX1-214ENST00000625244 ELL2O00472 640 aaPredicted RBP17.88■□□□□ 0.45
SNX1-214ENST00000625244 DDX58O95786 925 aaKnown RBP17.88■□□□□ 0.45
SNX1-214ENST00000625244 ELNP15502 786 aa17.88■□□□□ 0.45
SNX1-214ENST00000625244 CWF19L2Q2TBE0 894 aaKnown RBP17.88■□□□□ 0.45
SNX1-214ENST00000625244 ANKRD23Q86SG2 305 aa17.88■□□□□ 0.45
SNX1-214ENST00000625244 TDHQ8IZJ6 230 aa17.88■□□□□ 0.45
SNX1-214ENST00000625244 TTF2Q9UNY4 1162 aaKnown RBP17.88■□□□□ 0.45
SNX1-214ENST00000625244 H7C1W4 665 aa17.87■□□□□ 0.45
SNX1-214ENST00000625244 ADCY3O60266 1144 aa17.87■□□□□ 0.45
SNX1-214ENST00000625244 INHAP05111 366 aa17.87■□□□□ 0.45
SNX1-214ENST00000625244 MAGEA10P43363 369 aaPredicted RBP17.87■□□□□ 0.45
SNX1-214ENST00000625244 TNNI2P48788 182 aa17.87■□□□□ 0.45
SNX1-214ENST00000625244 FCGRTP55899 365 aa17.87■□□□□ 0.45
SNX1-214ENST00000625244 UBE3BQ7Z3V4 1068 aa17.87■□□□□ 0.45
SNX1-214ENST00000625244 CRISPLD2Q9H0B8 497 aa17.87■□□□□ 0.45
SNX1-214ENST00000625244 PAK6Q9NQU5 681 aaPredicted RBP17.87■□□□□ 0.45
SNX1-214ENST00000625244 DNAH12Q6ZR08 3092 aa17.87■□□□□ 0.45
SNX1-214ENST00000625244 SYN1P17600 705 aa17.86■□□□□ 0.45
SNX1-214ENST00000625244 MOGSQ13724 837 aa17.86■□□□□ 0.45
SNX1-214ENST00000625244 NECAB2Q7Z6G3 386 aa17.86■□□□□ 0.45
SNX1-214ENST00000625244 GUCD1Q96NT3 240 aa17.86■□□□□ 0.45
SNX1-214ENST00000625244 RPTORQ8N122 1335 aa17.86■□□□□ 0.45
SNX1-214ENST00000625244 ARAP2Q8WZ64 1704 aa17.86■□□□□ 0.45
SNX1-214ENST00000625244 PI4KAP2A4QPH2 592 aa17.85■□□□□ 0.45
SNX1-214ENST00000625244 NEURL1BA8MQ27 555 aa17.85■□□□□ 0.45
SNX1-214ENST00000625244 CSF1RP07333 972 aa17.85■□□□□ 0.45
SNX1-214ENST00000625244 BCRP11274 1271 aa17.85■□□□□ 0.45
SNX1-214ENST00000625244 CAPN2P17655 700 aa17.85■□□□□ 0.45
SNX1-214ENST00000625244 CRKP46108 304 aa17.85■□□□□ 0.45
SNX1-214ENST00000625244 FLT3LGP49771 235 aa17.85■□□□□ 0.45
SNX1-214ENST00000625244 CACNB3P54284 484 aa17.85■□□□□ 0.45
SNX1-214ENST00000625244 PPATQ06203 517 aa17.85■□□□□ 0.45
SNX1-214ENST00000625244 MFSD14BQ5SR56 506 aa17.85■□□□□ 0.45
SNX1-214ENST00000625244 FAM205AQ6ZU69 1335 aa17.85■□□□□ 0.45
SNX1-214ENST00000625244 PI4KAP1Q8N8J0 262 aa17.85■□□□□ 0.45
SNX1-214ENST00000625244 PLA2G12BQ9BX93 195 aa17.85■□□□□ 0.45
SNX1-214ENST00000625244 KSR2Q6VAB6 950 aa17.84■□□□□ 0.45
SNX1-214ENST00000625244 CYP2C8P10632 490 aa17.83■□□□□ 0.44
SNX1-214ENST00000625244 PXYLP1Q8TE99 480 aa17.83■□□□□ 0.44
SNX1-214ENST00000625244 UBE2OQ9C0C9 1292 aaKnown RBP17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms