RNA–Protein interactions for RNA: ENST00000625151.1

LINC00552-201, long intergenic non-protein coding RNA 552, humanhuman

BASIC

Gene LINC00552, Length 2,579 nt, Biotype TEC.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00552-201ENST00000625151 PCDH11YQ9BZA8 1340 aa17.71■□□□□ 0.43
LINC00552-201ENST00000625151 CCDC57Q2TAC2 916 aa17.71■□□□□ 0.43
LINC00552-201ENST00000625151 DPCR1Q3MIW9 517 aa17.71■□□□□ 0.43
LINC00552-201ENST00000625151 PI16Q6UXB8 463 aa17.71■□□□□ 0.43
LINC00552-201ENST00000625151 NBPF11Q86T75 865 aa17.71■□□□□ 0.43
LINC00552-201ENST00000625151 FBXO18Q8NFZ0 1043 aa17.71■□□□□ 0.43
LINC00552-201ENST00000625151 ORC3Q9UBD5 711 aaPredicted RBP17.71■□□□□ 0.43
LINC00552-201ENST00000625151 ZAP70P43403 619 aa17.71■□□□□ 0.43
LINC00552-201ENST00000625151 SYCP1Q15431 976 aa17.71■□□□□ 0.43
LINC00552-201ENST00000625151 SF3A1Q15459 793 aaKnown RBP17.71■□□□□ 0.43
LINC00552-201ENST00000625151 ZCRB1Q8TBF4 217 aaKnown RBP17.71■□□□□ 0.43
LINC00552-201ENST00000625151 NAT10Q9H0A0 1025 aaKnown RBP17.71■□□□□ 0.43
LINC00552-201ENST00000625151 COL14A1Q05707 1796 aaKnown RBP17.7■□□□□ 0.42
LINC00552-201ENST00000625151 KIF28PB7ZC32 967 aa17.7■□□□□ 0.42
LINC00552-201ENST00000625151 MYSM1Q5VVJ2 828 aa17.7■□□□□ 0.42
LINC00552-201ENST00000625151 NYAP1Q6ZVC0 841 aa17.7■□□□□ 0.42
LINC00552-201ENST00000625151 ISCA1Q9BUE6 129 aa17.7■□□□□ 0.42
LINC00552-201ENST00000625151 POLR3EQ9NVU0 708 aa17.7■□□□□ 0.42
LINC00552-201ENST00000625151 KIAA1468Q9P260 1216 aa17.7■□□□□ 0.42
LINC00552-201ENST00000625151 ZFYP08048 801 aaPredicted RBP17.7■□□□□ 0.42
LINC00552-201ENST00000625151 KCNG4Q8TDN1 519 aa17.7■□□□□ 0.42
LINC00552-201ENST00000625151 MYO5AQ9Y4I1 1855 aaKnown RBP17.69■□□□□ 0.42
LINC00552-201ENST00000625151 ERVV-2B6SEH9 535 aa17.69■□□□□ 0.42
LINC00552-201ENST00000625151 SPTLC2O15270 562 aa17.69■□□□□ 0.42
LINC00552-201ENST00000625151 YEATS4O95619 227 aa17.69■□□□□ 0.42
LINC00552-201ENST00000625151 IL2RBP14784 551 aa17.69■□□□□ 0.42
LINC00552-201ENST00000625151 LRRFIP1Q32MZ4 808 aaKnown RBP17.69■□□□□ 0.42
LINC00552-201ENST00000625151 APPBP2Q92624 585 aa17.69■□□□□ 0.42
LINC00552-201ENST00000625151 AKAP11Q9UKA4 1901 aa17.69■□□□□ 0.42
LINC00552-201ENST00000625151 NCOA7Q8NI08 942 aa17.69■□□□□ 0.42
LINC00552-201ENST00000625151 BCL11BQ9C0K0 894 aaPredicted RBP17.69■□□□□ 0.42
LINC00552-201ENST00000625151 TRMT1Q9NXH9 659 aaKnown RBP17.69■□□□□ 0.42
LINC00552-201ENST00000625151 DHX16O60231 1041 aaKnown RBP17.68■□□□□ 0.42
LINC00552-201ENST00000625151 PTPN14Q15678 1187 aa17.68■□□□□ 0.42
LINC00552-201ENST00000625151 AKAP2Q9Y2D5 859 aa17.68■□□□□ 0.42
LINC00552-201ENST00000625151 ZNF330Q9Y3S2 320 aaPredicted RBP17.68■□□□□ 0.42
LINC00552-201ENST00000625151 GPAA1O43292 621 aa17.68■□□□□ 0.42
LINC00552-201ENST00000625151 DMTNQ08495 405 aa17.68■□□□□ 0.42
LINC00552-201ENST00000625151 BRAPQ7Z569 592 aa17.68■□□□□ 0.42
LINC00552-201ENST00000625151 SHANK3Q9BYB0 1731 aa17.68■□□□□ 0.42
LINC00552-201ENST00000625151 DENND2AQ9ULE3 1009 aa17.68■□□□□ 0.42
LINC00552-201ENST00000625151 BIN1O00499 593 aa17.67■□□□□ 0.42
LINC00552-201ENST00000625151 CPLX1O14810 134 aa17.67■□□□□ 0.42
LINC00552-201ENST00000625151 KIF23Q02241 960 aaPredicted RBP17.67■□□□□ 0.42
LINC00552-201ENST00000625151 TCIRG1Q13488 830 aa17.67■□□□□ 0.42
LINC00552-201ENST00000625151 RALYLQ86SE5 291 aaKnown RBP17.67■□□□□ 0.42
LINC00552-201ENST00000625151 CCAR2Q8N163 923 aaKnown RBP17.67■□□□□ 0.42
LINC00552-201ENST00000625151 FAM89AQ96GI7 184 aa17.67■□□□□ 0.42
LINC00552-201ENST00000625151 AXDND1Q5T1B0 1012 aaPredicted RBP17.67■□□□□ 0.42
LINC00552-201ENST00000625151 NKX2-3Q8TAU0 364 aa17.67■□□□□ 0.42
LINC00552-201ENST00000625151 OSBPL5Q9H0X9 879 aaPredicted RBP17.67■□□□□ 0.42
LINC00552-201ENST00000625151 ECM29Q5VYK3 1845 aa17.67■□□□□ 0.42
LINC00552-201ENST00000625151 TNS2Q63HR2 1409 aa17.66■□□□□ 0.42
LINC00552-201ENST00000625151 MROH7-TTC4A0A0A0MT08 1334 aa17.66■□□□□ 0.42
LINC00552-201ENST00000625151 ZNF213O14771 459 aa17.66■□□□□ 0.42
LINC00552-201ENST00000625151 ZNF202O95125 648 aa17.66■□□□□ 0.42
LINC00552-201ENST00000625151 ANO1Q5XXA6 986 aa17.66■□□□□ 0.42
LINC00552-201ENST00000625151 BPIFA3Q9BQP9 254 aa17.66■□□□□ 0.42
LINC00552-201ENST00000625151 XPO4Q9C0E2 1151 aaKnown RBP17.66■□□□□ 0.42
LINC00552-201ENST00000625151 NBPF3Q9H094 633 aa17.66■□□□□ 0.42
LINC00552-201ENST00000625151 RIC1Q4ADV7 1423 aa17.66■□□□□ 0.42
LINC00552-201ENST00000625151 SYNE3Q6ZMZ3 975 aa17.66■□□□□ 0.42
LINC00552-201ENST00000625151 FBXO3Q9UK99 471 aa17.66■□□□□ 0.42
LINC00552-201ENST00000625151 PLCH1Q4KWH8 1693 aa17.65■□□□□ 0.42
LINC00552-201ENST00000625151 SLC3A2P08195 630 aaKnown RBP17.65■□□□□ 0.42
LINC00552-201ENST00000625151 PFKFB1P16118 471 aa17.65■□□□□ 0.42
LINC00552-201ENST00000625151 GSDMDP57764 484 aa17.65■□□□□ 0.42
LINC00552-201ENST00000625151 ZRSR1Q15695 479 aaKnown RBP17.65■□□□□ 0.42
LINC00552-201ENST00000625151 TAF7LQ5H9L4 462 aa17.65■□□□□ 0.42
LINC00552-201ENST00000625151 AIFM3Q96NN9 605 aa17.65■□□□□ 0.42
LINC00552-201ENST00000625151 IFNKQ9P0W0 207 aa17.65■□□□□ 0.42
LINC00552-201ENST00000625151 WDHD1O75717 1129 aaPredicted RBP17.65■□□□□ 0.42
LINC00552-201ENST00000625151 SMC2O95347 1197 aa17.65■□□□□ 0.42
LINC00552-201ENST00000625151 MCAMP43121 646 aa17.65■□□□□ 0.42
LINC00552-201ENST00000625151 NKX1-1Q15270 411 aaPredicted RBP17.65■□□□□ 0.42
LINC00552-201ENST00000625151 NLRP12P59046 1061 aa17.64■□□□□ 0.41
LINC00552-201ENST00000625151 NCAPHQ15003 741 aa17.64■□□□□ 0.41
LINC00552-201ENST00000625151 UTP14CQ5TAP6 766 aaKnown RBP17.64■□□□□ 0.41
LINC00552-201ENST00000625151 SYNE4Q8N205 404 aa17.64■□□□□ 0.41
LINC00552-201ENST00000625151 KCND1Q9NSA2 647 aa17.64■□□□□ 0.41
LINC00552-201ENST00000625151 IMPACTQ9P2X3 320 aa17.64■□□□□ 0.41
LINC00552-201ENST00000625151 ZNF215Q9UL58 517 aaPredicted RBP17.64■□□□□ 0.41
LINC00552-201ENST00000625151 MARCKSP29966 332 aaPredicted RBP17.64■□□□□ 0.41
LINC00552-201ENST00000625151 IFIT5Q13325 482 aaKnown RBP17.64■□□□□ 0.41
LINC00552-201ENST00000625151 ARMCX5Q6P1M9 558 aa17.64■□□□□ 0.41
LINC00552-201ENST00000625151 TOGARAM1Q9Y4F4 1720 aa17.64■□□□□ 0.41
LINC00552-201ENST00000625151 ABCC12Q96J65 1359 aa17.64■□□□□ 0.41
LINC00552-201ENST00000625151 WDR19Q8NEZ3 1342 aa17.63■□□□□ 0.41
LINC00552-201ENST00000625151 PCCAP05165 728 aaPredicted RBP17.63■□□□□ 0.41
LINC00552-201ENST00000625151 CSF1RP07333 972 aa17.63■□□□□ 0.41
LINC00552-201ENST00000625151 CMA1P23946 247 aa17.63■□□□□ 0.41
LINC00552-201ENST00000625151 TMC6Q7Z403 805 aa17.63■□□□□ 0.41
LINC00552-201ENST00000625151 TBC1D10CQ8IV04 446 aa17.63■□□□□ 0.41
LINC00552-201ENST00000625151 FEZ1Q99689 392 aa17.63■□□□□ 0.41
LINC00552-201ENST00000625151 CGNQ9P2M7 1197 aaKnown RBP17.63■□□□□ 0.41
LINC00552-201ENST00000625151 RXRAP19793 462 aa17.63■□□□□ 0.41
LINC00552-201ENST00000625151 ISM2Q6H9L7 571 aa17.63■□□□□ 0.41
LINC00552-201ENST00000625151 CYB5R4Q7L1T6 521 aa17.63■□□□□ 0.41
LINC00552-201ENST00000625151 PLA2G12BQ9BX93 195 aa17.63■□□□□ 0.41
LINC00552-201ENST00000625151 TRIM28Q13263 835 aaKnown RBP17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms