RNA–Protein interactions for RNA: ENST00000624009.3

LINC00963-217, long intergenic non-protein coding RNA 963, humanhuman

TSL 5 BASIC

Gene LINC00963, Length 663 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-217ENST00000624009 AIDAQ96BJ3 306 aa15.39■□□□□ 0.05
LINC00963-217ENST00000624009 ZDHHC15Q96MV8 337 aa15.39■□□□□ 0.05
LINC00963-217ENST00000624009 DEFB129Q9H1M3 183 aa15.39■□□□□ 0.05
LINC00963-217ENST00000624009 DDX19BQ9UMR2 479 aa15.39■□□□□ 0.05
LINC00963-217ENST00000624009 JAG2Q9Y219 1238 aa15.39■□□□□ 0.05
LINC00963-217ENST00000624009 LAMB1P07942 1786 aa15.39■□□□□ 0.05
LINC00963-217ENST00000624009 A0A1B0GUL7 405 aa15.38■□□□□ 0.05
LINC00963-217ENST00000624009 CRKP46108 304 aa15.38■□□□□ 0.05
LINC00963-217ENST00000624009 CHAF1AQ13111 956 aaPredicted RBP15.38■□□□□ 0.05
LINC00963-217ENST00000624009 PDE3AQ14432 1141 aa15.38■□□□□ 0.05
LINC00963-217ENST00000624009 FKBP1CQ5VVH2 108 aa15.38■□□□□ 0.05
LINC00963-217ENST00000624009 DLK2Q6UY11 383 aa15.38■□□□□ 0.05
LINC00963-217ENST00000624009 IQSEC3Q9UPP2 1182 aaPredicted RBP15.38■□□□□ 0.05
LINC00963-217ENST00000624009 IGSF3O75054 1194 aa15.37■□□□□ 0.05
LINC00963-217ENST00000624009 CTCFP49711 727 aaPredicted RBP15.37■□□□□ 0.05
LINC00963-217ENST00000624009 RBM5P52756 815 aaKnown RBP eCLIP15.37■□□□□ 0.05
LINC00963-217ENST00000624009 TFCP2Q12800 502 aa15.37■□□□□ 0.05
LINC00963-217ENST00000624009 MAP3K11Q16584 847 aa15.37■□□□□ 0.05
LINC00963-217ENST00000624009 SUPT20HL1Q3ZLR7 823 aa15.37■□□□□ 0.05
LINC00963-217ENST00000624009 CCDC102BQ68D86 513 aa15.37■□□□□ 0.05
LINC00963-217ENST00000624009 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.37■□□□□ 0.05
LINC00963-217ENST00000624009 BEGAINQ9BUH8 593 aa15.37■□□□□ 0.05
LINC00963-217ENST00000624009 PRDM10Q9NQV6 1147 aa15.37■□□□□ 0.05
LINC00963-217ENST00000624009 FAM155AB1AL88 458 aaPredicted RBP15.36■□□□□ 0.05
LINC00963-217ENST00000624009 SLC10A3P09131 477 aa15.36■□□□□ 0.05
LINC00963-217ENST00000624009 PHKA1P46020 1223 aa15.36■□□□□ 0.05
LINC00963-217ENST00000624009 ZNF157P51786 506 aaPredicted RBP15.36■□□□□ 0.05
LINC00963-217ENST00000624009 ARMC9Q7Z3E5 817 aa15.36■□□□□ 0.05
LINC00963-217ENST00000624009 PANK1Q8TE04 598 aa15.36■□□□□ 0.05
LINC00963-217ENST00000624009 XAGE2Q96GT9 111 aa15.36■□□□□ 0.05
LINC00963-217ENST00000624009 ZNF70Q9UC06 446 aaPredicted RBP15.36■□□□□ 0.05
LINC00963-217ENST00000624009 TNNI2P48788 182 aa15.35■□□□□ 0.05
LINC00963-217ENST00000624009 TIMM10P62072 90 aa15.35■□□□□ 0.05
LINC00963-217ENST00000624009 CEP85Q6P2H3 762 aa15.35■□□□□ 0.05
LINC00963-217ENST00000624009 RPAP2Q8IXW5 612 aaPredicted RBP15.35■□□□□ 0.05
LINC00963-217ENST00000624009 RPAP1Q9BWH6 1393 aaPredicted RBP15.35■□□□□ 0.05
LINC00963-217ENST00000624009 FOXN1O15353 648 aa15.34■□□□□ 0.05
LINC00963-217ENST00000624009 PPP1R12BO60237 982 aaPredicted RBP15.34■□□□□ 0.05
LINC00963-217ENST00000624009 LDHBP07195 334 aaKnown RBP15.34■□□□□ 0.05
LINC00963-217ENST00000624009 ARID4AP29374 1257 aaPredicted RBP15.34■□□□□ 0.05
LINC00963-217ENST00000624009 ADORA1P30542 326 aa15.34■□□□□ 0.05
LINC00963-217ENST00000624009 RASGRF1Q13972 1273 aa15.34■□□□□ 0.05
LINC00963-217ENST00000624009 GRIK5Q16478 980 aa15.34■□□□□ 0.05
LINC00963-217ENST00000624009 HSP90AB4PQ58FF6 505 aa15.34■□□□□ 0.05
LINC00963-217ENST00000624009 LDLRAD1Q5T700 205 aa15.34■□□□□ 0.05
LINC00963-217ENST00000624009 SPTY2D1Q68D10 685 aaPredicted RBP15.34■□□□□ 0.05
LINC00963-217ENST00000624009 APOBEC3HQ6NTF7 200 aaKnown RBP15.34■□□□□ 0.05
LINC00963-217ENST00000624009 FAM83AQ86UY5 434 aa15.34■□□□□ 0.05
LINC00963-217ENST00000624009 VEZTQ9HBM0 779 aa15.34■□□□□ 0.05
LINC00963-217ENST00000624009 ZBTB40Q9NUA8 1239 aa15.34■□□□□ 0.05
LINC00963-217ENST00000624009 PCDHAC2Q9Y5I4 1007 aa15.34■□□□□ 0.05
LINC00963-217ENST00000624009 AK9Q5TCS8 1911 aa15.34■□□□□ 0.05
LINC00963-217ENST00000624009 AOC2O75106 756 aa15.33■□□□□ 0.04
LINC00963-217ENST00000624009 SURF6O75683 361 aaKnown RBP15.33■□□□□ 0.04
LINC00963-217ENST00000624009 UQCRFS1P1P0C7P4 283 aa15.33■□□□□ 0.04
LINC00963-217ENST00000624009 RASA3Q14644 834 aa15.33■□□□□ 0.04
LINC00963-217ENST00000624009 ERC1Q8IUD2 1116 aa15.33■□□□□ 0.04
LINC00963-217ENST00000624009 SLF2Q8IX21 1173 aa15.33■□□□□ 0.04
LINC00963-217ENST00000624009 FAM163AQ96GL9 167 aaPredicted RBP15.33■□□□□ 0.04
LINC00963-217ENST00000624009 ZNF512BQ96KM6 892 aaPredicted RBP15.33■□□□□ 0.04
LINC00963-217ENST00000624009 TDRD3Q9H7E2 651 aaKnown RBP15.33■□□□□ 0.04
LINC00963-217ENST00000624009 SAGE1Q9NXZ1 904 aa15.33■□□□□ 0.04
LINC00963-217ENST00000624009 TMOD2Q9NZR1 351 aa15.33■□□□□ 0.04
LINC00963-217ENST00000624009 SSC5DA1L4H1 1573 aa15.32■□□□□ 0.04
LINC00963-217ENST00000624009 CLRN2A0PK11 232 aa15.32■□□□□ 0.04
LINC00963-217ENST00000624009 TNNI3KQ59H18 835 aa15.32■□□□□ 0.04
LINC00963-217ENST00000624009 PRAMEF18Q5VWM3 479 aa15.32■□□□□ 0.04
LINC00963-217ENST00000624009 RASAL3Q86YV0 1011 aa15.32■□□□□ 0.04
LINC00963-217ENST00000624009 HOOK2Q96ED9 719 aa15.32■□□□□ 0.04
LINC00963-217ENST00000624009 NEUROD6Q96NK8 337 aa15.32■□□□□ 0.04
LINC00963-217ENST00000624009 C1orf115Q9H7X2 142 aa15.32■□□□□ 0.04
LINC00963-217ENST00000624009 SCAF8Q9UPN6 1271 aaKnown RBP15.32■□□□□ 0.04
LINC00963-217ENST00000624009 FPGT-TNNI3KV9GXZ4 949 aa15.32■□□□□ 0.04
LINC00963-217ENST00000624009 AOX1Q06278 1338 aa15.32■□□□□ 0.04
LINC00963-217ENST00000624009 OTOFQ9HC10 1997 aa15.31■□□□□ 0.04
LINC00963-217ENST00000624009 HMMRO75330 724 aa15.31■□□□□ 0.04
LINC00963-217ENST00000624009 PRDX5P30044 214 aa15.31■□□□□ 0.04
LINC00963-217ENST00000624009 IREB2P48200 963 aaKnown RBP15.31■□□□□ 0.04
LINC00963-217ENST00000624009 GRM1Q13255 1194 aa15.31■□□□□ 0.04
LINC00963-217ENST00000624009 OS9Q13438 667 aaPredicted RBP15.31■□□□□ 0.04
LINC00963-217ENST00000624009 TTLL12Q14166 644 aaPredicted RBP15.31■□□□□ 0.04
LINC00963-217ENST00000624009 GORABQ5T7V8 394 aa15.31■□□□□ 0.04
LINC00963-217ENST00000624009 TEPSINQ96N21 525 aa15.31■□□□□ 0.04
LINC00963-217ENST00000624009 DAGLAQ9Y4D2 1042 aa15.31■□□□□ 0.04
LINC00963-217ENST00000624009 GAKO14976 1311 aa15.31■□□□□ 0.04
LINC00963-217ENST00000624009 CASP8AP2Q9UKL3 1982 aa15.31■□□□□ 0.04
LINC00963-217ENST00000624009 MAP4K4O95819 1239 aaPredicted RBP15.3■□□□□ 0.04
LINC00963-217ENST00000624009 HSPA8P11142 646 aaKnown RBP15.3■□□□□ 0.04
LINC00963-217ENST00000624009 CCDC158Q5M9N0 1113 aa15.3■□□□□ 0.04
LINC00963-217ENST00000624009 TMED8Q6PL24 325 aaPredicted RBP15.3■□□□□ 0.04
LINC00963-217ENST00000624009 SPATA5Q8NB90 893 aa15.3■□□□□ 0.04
LINC00963-217ENST00000624009 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.3■□□□□ 0.04
LINC00963-217ENST00000624009 UBE2Q2LH0YL09 131 aa15.29■□□□□ 0.04
LINC00963-217ENST00000624009 ZBTB48P10074 688 aaPredicted RBP15.29■□□□□ 0.04
LINC00963-217ENST00000624009 KIF23Q02241 960 aaPredicted RBP15.29■□□□□ 0.04
LINC00963-217ENST00000624009 NBPF12Q5TAG4 269 aaPredicted RBP15.29■□□□□ 0.04
LINC00963-217ENST00000624009 HMG20BQ9P0W2 317 aa15.29■□□□□ 0.04
LINC00963-217ENST00000624009 ANGEL1Q9UNK9 670 aaKnown RBP15.29■□□□□ 0.04
LINC00963-217ENST00000624009 COG6Q9Y2V7 657 aa15.29■□□□□ 0.04
LINC00963-217ENST00000624009 MAST2Q6P0Q8 1798 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms