RNA–Protein interactions for RNA: ENST00000623535.1

CDKL5-205, Transcript of cyclin dependent kinase like 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKL5, Length 12,533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-205ENST00000623535 SYNDIG1Q9H7V2 258 aa7.07□□□□□ -1.28
CDKL5-205ENST00000623535 WDR33Q9C0J8 1336 aaKnown RBP7.07□□□□□ -1.28
CDKL5-205ENST00000623535 VPS8Q8N3P4 1428 aa7.07□□□□□ -1.28
CDKL5-205ENST00000623535 ZFYP08048 801 aaPredicted RBP7.07□□□□□ -1.28
CDKL5-205ENST00000623535 ECE1P42892 770 aa7.07□□□□□ -1.28
CDKL5-205ENST00000623535 MXRA7P84157 204 aa7.07□□□□□ -1.28
CDKL5-205ENST00000623535 SELENOOQ9BVL4 669 aa7.07□□□□□ -1.28
CDKL5-205ENST00000623535 UPF3BQ9BZI7 483 aaKnown RBP7.07□□□□□ -1.28
CDKL5-205ENST00000623535 MLXIPQ9HAP2 919 aa7.07□□□□□ -1.28
CDKL5-205ENST00000623535 FARP1Q9Y4F1 1045 aaPredicted RBP7.07□□□□□ -1.28
CDKL5-205ENST00000623535 NNMTP40261 264 aa7.07□□□□□ -1.28
CDKL5-205ENST00000623535 HAUS8Q9BT25 410 aa7.07□□□□□ -1.28
CDKL5-205ENST00000623535 TBC1D22AQ8WUA7 517 aa7.07□□□□□ -1.28
CDKL5-205ENST00000623535 GLG1Q92896 1179 aa7.07□□□□□ -1.28
CDKL5-205ENST00000623535 NUDT16Q96DE0 195 aaKnown RBP7.07□□□□□ -1.28
CDKL5-205ENST00000623535 MAP10Q9P2G4 905 aa7.07□□□□□ -1.28
CDKL5-205ENST00000623535 GTPBP6O43824 516 aaPredicted RBP7.07□□□□□ -1.28
CDKL5-205ENST00000623535 SLC12A2P55011 1212 aa7.07□□□□□ -1.28
CDKL5-205ENST00000623535 CCDC50Q8IVM0 306 aa7.07□□□□□ -1.28
CDKL5-205ENST00000623535 TTC14Q96N46 770 aa7.07□□□□□ -1.28
CDKL5-205ENST00000623535 MED10Q9BTT4 135 aa7.07□□□□□ -1.28
CDKL5-205ENST00000623535 NSD3Q9BZ95 1437 aa7.07□□□□□ -1.28
CDKL5-205ENST00000623535 WDR64B1ANS9 1081 aa7.07□□□□□ -1.28
CDKL5-205ENST00000623535 PLCB3Q01970 1234 aa7.07□□□□□ -1.28
CDKL5-205ENST00000623535 SKA2Q8WVK7 121 aaPredicted RBP7.07□□□□□ -1.28
CDKL5-205ENST00000623535 C8orf76Q96K31 380 aa7.07□□□□□ -1.28
CDKL5-205ENST00000623535 APAF1O14727 1248 aa7.07□□□□□ -1.28
CDKL5-205ENST00000623535 CCDC68Q9H2F9 335 aa7.07□□□□□ -1.28
CDKL5-205ENST00000623535 ZKSCAN5Q9Y2L8 839 aa7.07□□□□□ -1.28
CDKL5-205ENST00000623535 CAMSAP2Q08AD1 1489 aa7.07□□□□□ -1.28
CDKL5-205ENST00000623535 RTL9Q8NET4 1388 aa7.07□□□□□ -1.28
CDKL5-205ENST00000623535 FAM95CA0A1B0GW59 222 aa7.07□□□□□ -1.28
CDKL5-205ENST00000623535 NUP88Q99567 741 aaPredicted RBP7.07□□□□□ -1.28
CDKL5-205ENST00000623535 AGTPBP1Q9UPW5 1226 aa7.07□□□□□ -1.28
CDKL5-205ENST00000623535 SLC4A7Q9Y6M7 1214 aa7.07□□□□□ -1.28
CDKL5-205ENST00000623535 CTAGE5O15320 804 aa7.07□□□□□ -1.28
CDKL5-205ENST00000623535 SFPQP23246 707 aaKnown RBP eCLIP7.07□□□□□ -1.28
CDKL5-205ENST00000623535 TMPOP42166 694 aaKnown RBP7.06□□□□□ -1.28
CDKL5-205ENST00000623535 C4orf50Q6ZRC1 276 aa7.06□□□□□ -1.28
CDKL5-205ENST00000623535 ZBTB8OSQ8IWT0 167 aa7.06□□□□□ -1.28
CDKL5-205ENST00000623535 UFL1O94874 794 aa7.06□□□□□ -1.28
CDKL5-205ENST00000623535 ARL4DP49703 201 aa7.06□□□□□ -1.28
CDKL5-205ENST00000623535 EFCAB13Q8IY85 973 aa7.06□□□□□ -1.28
CDKL5-205ENST00000623535 RPUSD2Q8IZ73 545 aaKnown RBP7.06□□□□□ -1.28
CDKL5-205ENST00000623535 PCDH11XQ9BZA7 1347 aa7.06□□□□□ -1.28
CDKL5-205ENST00000623535 PCDH11YQ9BZA8 1340 aa7.06□□□□□ -1.28
CDKL5-205ENST00000623535 HFM1A2PYH4 1435 aa7.06□□□□□ -1.28
CDKL5-205ENST00000623535 TMEM67Q5HYA8 995 aa7.06□□□□□ -1.28
CDKL5-205ENST00000623535 OTUD6AQ7L8S5 288 aa7.06□□□□□ -1.28
CDKL5-205ENST00000623535 JPH2Q9BR39 696 aaPredicted RBP7.06□□□□□ -1.28
CDKL5-205ENST00000623535 C19orf44Q9H6X5 657 aa7.06□□□□□ -1.28
CDKL5-205ENST00000623535 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.06□□□□□ -1.28
CDKL5-205ENST00000623535 FAM196AQ6ZSG2 479 aa7.06□□□□□ -1.28
CDKL5-205ENST00000623535 GIMAP7Q8NHV1 300 aa7.06□□□□□ -1.28
CDKL5-205ENST00000623535 PAGR1Q9BTK6 254 aa7.06□□□□□ -1.28
CDKL5-205ENST00000623535 PDRG1Q9NUG6 133 aa7.06□□□□□ -1.28
CDKL5-205ENST00000623535 TYRO3Q06418 890 aa7.06□□□□□ -1.28
CDKL5-205ENST00000623535 PPP2R5DQ14738 602 aa7.06□□□□□ -1.28
CDKL5-205ENST00000623535 TADA2BQ86TJ2 420 aa7.06□□□□□ -1.28
CDKL5-205ENST00000623535 DZIP3Q86Y13 1208 aaKnown RBP7.06□□□□□ -1.28
CDKL5-205ENST00000623535 TTC36A6NLP5 189 aa7.06□□□□□ -1.28
CDKL5-205ENST00000623535 H0YCG3 227 aa7.06□□□□□ -1.28
CDKL5-205ENST00000623535 ANXA13P27216 316 aa7.06□□□□□ -1.28
CDKL5-205ENST00000623535 PRKG1Q13976 671 aa7.06□□□□□ -1.28
CDKL5-205ENST00000623535 MICALCLQ6ZW33 695 aa7.06□□□□□ -1.28
CDKL5-205ENST00000623535 NAP1L3Q99457 506 aaPredicted RBP7.06□□□□□ -1.28
CDKL5-205ENST00000623535 NUCKS1Q9H1E3 243 aaKnown RBP7.06□□□□□ -1.28
CDKL5-205ENST00000623535 S100BP04271 92 aaPredicted RBP7.06□□□□□ -1.28
CDKL5-205ENST00000623535 RECQLP46063 649 aaPredicted RBP7.06□□□□□ -1.28
CDKL5-205ENST00000623535 HAUS3Q68CZ6 603 aa7.06□□□□□ -1.28
CDKL5-205ENST00000623535 L3MBTL2Q969R5 705 aa7.06□□□□□ -1.28
CDKL5-205ENST00000623535 ZNF215Q9UL58 517 aaPredicted RBP7.06□□□□□ -1.28
CDKL5-205ENST00000623535 RYBPQ8N488 228 aaPredicted RBP7.06□□□□□ -1.28
CDKL5-205ENST00000623535 GNAT1P11488 350 aa7.06□□□□□ -1.28
CDKL5-205ENST00000623535 LIN9Q5TKA1 542 aa7.06□□□□□ -1.28
CDKL5-205ENST00000623535 NT5DC4Q86YG4 428 aa7.06□□□□□ -1.28
CDKL5-205ENST00000623535 MMRN2Q9H8L6 949 aa7.06□□□□□ -1.28
CDKL5-205ENST00000623535 DOLKQ9UPQ8 538 aa7.06□□□□□ -1.28
CDKL5-205ENST00000623535 FAN1Q9Y2M0 1017 aa7.06□□□□□ -1.28
CDKL5-205ENST00000623535 TBCCQ15814 346 aa7.05□□□□□ -1.28
CDKL5-205ENST00000623535 SCG3Q8WXD2 468 aaKnown RBP7.05□□□□□ -1.28
CDKL5-205ENST00000623535 RTN4Q9NQC3 1192 aaKnown RBP7.05□□□□□ -1.28
CDKL5-205ENST00000623535 TRPC6Q9Y210 931 aa7.05□□□□□ -1.28
CDKL5-205ENST00000623535 FBF1Q8TES7 1133 aa7.05□□□□□ -1.28
CDKL5-205ENST00000623535 ZBTB21Q9ULJ3 1066 aa7.05□□□□□ -1.28
CDKL5-205ENST00000623535 PARP10Q53GL7 1025 aa7.05□□□□□ -1.28
CDKL5-205ENST00000623535 GPATCH4Q5T3I0 446 aaKnown RBP7.05□□□□□ -1.28
CDKL5-205ENST00000623535 LMBR1LQ6UX01 489 aa7.05□□□□□ -1.28
CDKL5-205ENST00000623535 RAET1EQ8TD07 263 aa7.05□□□□□ -1.28
CDKL5-205ENST00000623535 TRIM7Q9C029 511 aa7.05□□□□□ -1.28
CDKL5-205ENST00000623535 ANAPC5Q9UJX4 755 aa7.05□□□□□ -1.28
CDKL5-205ENST00000623535 RAPGEF3O95398 923 aa7.05□□□□□ -1.28
CDKL5-205ENST00000623535 KRT79Q5XKE5 535 aa7.05□□□□□ -1.28
CDKL5-205ENST00000623535 PHLDB2Q86SQ0 1253 aa7.05□□□□□ -1.28
CDKL5-205ENST00000623535 ZNF233A6NK53 670 aa7.05□□□□□ -1.28
CDKL5-205ENST00000623535 CYP7A1P22680 504 aa7.05□□□□□ -1.28
CDKL5-205ENST00000623535 CFAP100Q494V2 611 aa7.05□□□□□ -1.28
CDKL5-205ENST00000623535 LNPKQ9C0E8 428 aa7.05□□□□□ -1.28
CDKL5-205ENST00000623535 CAPN9O14815 690 aa7.05□□□□□ -1.28
CDKL5-205ENST00000623535 WTAPQ15007 396 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms