RNA–Protein interactions for RNA: ENST00000623242.3

ATRX-209, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 3

Gene ATRX, Length 725 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-209ENST00000623242 NT5DC4Q86YG4 428 aa6.24□□□□□ -1.41
ATRX-209ENST00000623242 URB2Q14146 1524 aaKnown RBP6.24□□□□□ -1.41
ATRX-209ENST00000623242 CNTNAP5Q8WYK1 1306 aa6.24□□□□□ -1.41
ATRX-209ENST00000623242 DNMBPQ6XZF7 1577 aa6.23□□□□□ -1.41
ATRX-209ENST00000623242 F6X3S4 739 aa6.23□□□□□ -1.41
ATRX-209ENST00000623242 H3BRJ5 948 aa6.23□□□□□ -1.41
ATRX-209ENST00000623242 RACK1P63244 317 aaKnown RBP6.23□□□□□ -1.41
ATRX-209ENST00000623242 CCDC85BQ15834 202 aaPredicted RBP6.23□□□□□ -1.41
ATRX-209ENST00000623242 ZNF394Q53GI3 561 aa6.23□□□□□ -1.41
ATRX-209ENST00000623242 RASIP1Q5U651 963 aa6.23□□□□□ -1.41
ATRX-209ENST00000623242 MSL1Q68DK7 614 aa6.23□□□□□ -1.41
ATRX-209ENST00000623242 LINC00114Q6XXX2 140 aa6.23□□□□□ -1.41
ATRX-209ENST00000623242 SV2BQ7L1I2 683 aa6.23□□□□□ -1.41
ATRX-209ENST00000623242 STK35Q8TDR2 534 aa6.23□□□□□ -1.41
ATRX-209ENST00000623242 NOC4LQ9BVI4 516 aaKnown RBP6.23□□□□□ -1.41
ATRX-209ENST00000623242 SRA1Q9HD15 236 aaKnown RBP6.23□□□□□ -1.41
ATRX-209ENST00000623242 PCDHGB7Q9Y5F8 929 aa6.23□□□□□ -1.41
ATRX-209ENST00000623242 TOPBP1Q92547 1522 aa6.23□□□□□ -1.41
ATRX-209ENST00000623242 CUX1P39880 1505 aa6.22□□□□□ -1.41
ATRX-209ENST00000623242 IKBKEQ14164 716 aa6.22□□□□□ -1.41
ATRX-209ENST00000623242 SETDB1Q15047 1291 aa6.22□□□□□ -1.41
ATRX-209ENST00000623242 MAP3K11Q16584 847 aa6.22□□□□□ -1.41
ATRX-209ENST00000623242 GPAT2Q6NUI2 795 aa6.22□□□□□ -1.41
ATRX-209ENST00000623242 WFDC8Q8IUA0 241 aa6.22□□□□□ -1.41
ATRX-209ENST00000623242 DMRTC2Q8IXT2 367 aaPredicted RBP6.22□□□□□ -1.41
ATRX-209ENST00000623242 FAM9AQ8IZU1 332 aaPredicted RBP6.22□□□□□ -1.41
ATRX-209ENST00000623242 CACTIN-AS1Q8N1I8 211 aa6.22□□□□□ -1.41
ATRX-209ENST00000623242 BEND7Q8N7W2 519 aaPredicted RBP6.22□□□□□ -1.41
ATRX-209ENST00000623242 TRIM11Q96F44 468 aa6.22□□□□□ -1.41
ATRX-209ENST00000623242 RRAGCQ9HB90 399 aa6.22□□□□□ -1.41
ATRX-209ENST00000623242 ZFYVE1Q9HBF4 777 aa6.22□□□□□ -1.41
ATRX-209ENST00000623242 KBTBD4Q9NVX7 518 aa6.22□□□□□ -1.41
ATRX-209ENST00000623242 GPN3Q9UHW5 284 aaPredicted RBP6.22□□□□□ -1.41
ATRX-209ENST00000623242 GGT7Q9UJ14 662 aa6.22□□□□□ -1.41
ATRX-209ENST00000623242 PPME1Q9Y570 386 aa6.22□□□□□ -1.41
ATRX-209ENST00000623242 FGD5Q6ZNL6 1462 aa6.22□□□□□ -1.41
ATRX-209ENST00000623242 DEAF1O75398 565 aaPredicted RBP6.21□□□□□ -1.42
ATRX-209ENST00000623242 ERCC5P28715 1186 aaPredicted RBP6.21□□□□□ -1.42
ATRX-209ENST00000623242 HS2ST1Q7LGA3 356 aa6.21□□□□□ -1.42
ATRX-209ENST00000623242 GALNT11Q8NCW6 608 aa6.21□□□□□ -1.42
ATRX-209ENST00000623242 RSRP1Q9BUV0 290 aa6.21□□□□□ -1.42
ATRX-209ENST00000623242 CARD10Q9BWT7 1032 aa6.21□□□□□ -1.42
ATRX-209ENST00000623242 CEP44Q9C0F1 390 aa6.21□□□□□ -1.42
ATRX-209ENST00000623242 NRSN2Q9GZP1 204 aa6.21□□□□□ -1.42
ATRX-209ENST00000623242 TMEM39AQ9NV64 488 aa6.21□□□□□ -1.42
ATRX-209ENST00000623242 DDX41Q9UJV9 622 aaKnown RBP6.21□□□□□ -1.42
ATRX-209ENST00000623242 SOGA1O94964 1423 aa6.21□□□□□ -1.42
ATRX-209ENST00000623242 SYNJ1O43426 1573 aa6.21□□□□□ -1.42
ATRX-209ENST00000623242 WDR62O43379 1518 aa6.2□□□□□ -1.42
ATRX-209ENST00000623242 FSCN2O14926 492 aa6.2□□□□□ -1.42
ATRX-209ENST00000623242 IGHA1P01876 353 aa6.2□□□□□ -1.42
ATRX-209ENST00000623242 BMP6P22004 513 aa6.2□□□□□ -1.42
ATRX-209ENST00000623242 CABP4P57796 275 aa6.2□□□□□ -1.42
ATRX-209ENST00000623242 PIP4K2BP78356 416 aa6.2□□□□□ -1.42
ATRX-209ENST00000623242 PHC3Q8NDX5 983 aa6.2□□□□□ -1.42
ATRX-209ENST00000623242 KLHDC7BQ96G42 594 aa6.2□□□□□ -1.42
ATRX-209ENST00000623242 TLR6Q9Y2C9 796 aa6.2□□□□□ -1.42
ATRX-209ENST00000623242 THOC2Q8NI27 1593 aaKnown RBP6.19□□□□□ -1.42
ATRX-209ENST00000623242 TOP2BQ02880 1626 aa6.19□□□□□ -1.42
ATRX-209ENST00000623242 ECEL1O95672 775 aa6.19□□□□□ -1.42
ATRX-209ENST00000623242 CTSBP07858 339 aa6.19□□□□□ -1.42
ATRX-209ENST00000623242 LIG3P49916 1009 aa6.19□□□□□ -1.42
ATRX-209ENST00000623242 PCNX4Q63HM2 1172 aa6.19□□□□□ -1.42
ATRX-209ENST00000623242 PDZD3Q86UT5 571 aa6.19□□□□□ -1.42
ATRX-209ENST00000623242 USP48Q86UV5 1035 aa6.19□□□□□ -1.42
ATRX-209ENST00000623242 SLC7A3Q8WY07 619 aa6.19□□□□□ -1.42
ATRX-209ENST00000623242 WNT8BQ93098 351 aa6.19□□□□□ -1.42
ATRX-209ENST00000623242 RHOVQ96L33 236 aa6.19□□□□□ -1.42
ATRX-209ENST00000623242 TMEM74Q96NL1 305 aa6.19□□□□□ -1.42
ATRX-209ENST00000623242 TGIF2Q9GZN2 237 aa6.19□□□□□ -1.42
ATRX-209ENST00000623242 ACBD3Q9H3P7 528 aa6.19□□□□□ -1.42
ATRX-209ENST00000623242 SOX17Q9H6I2 414 aaPredicted RBP6.19□□□□□ -1.42
ATRX-209ENST00000623242 KCNK4Q9NYG8 393 aa6.19□□□□□ -1.42
ATRX-209ENST00000623242 ADAMTS1Q9UHI8 967 aa6.19□□□□□ -1.42
ATRX-209ENST00000623242 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.19□□□□□ -1.42
ATRX-209ENST00000623242 POLA1P09884 1462 aaPredicted RBP6.19□□□□□ -1.42
ATRX-209ENST00000623242 RAD54L2Q9Y4B4 1467 aa6.19□□□□□ -1.42
ATRX-209ENST00000623242 CUX2O14529 1486 aa6.18□□□□□ -1.42
ATRX-209ENST00000623242 IFT140Q96RY7 1462 aa6.18□□□□□ -1.42
ATRX-209ENST00000623242 DDX3YO15523 660 aaKnown RBP6.18□□□□□ -1.42
ATRX-209ENST00000623242 ADAM11O75078 769 aa6.18□□□□□ -1.42
ATRX-209ENST00000623242 TFE3P19532 575 aaPredicted RBP6.18□□□□□ -1.42
ATRX-209ENST00000623242 GARTP22102 1010 aa6.18□□□□□ -1.42
ATRX-209ENST00000623242 NME2P22392 152 aa6.18□□□□□ -1.42
ATRX-209ENST00000623242 TNNI2P48788 182 aa6.18□□□□□ -1.42
ATRX-209ENST00000623242 GSTM4Q03013 218 aa6.18□□□□□ -1.42
ATRX-209ENST00000623242 C19orf57Q0VDD7 668 aa6.18□□□□□ -1.42
ATRX-209ENST00000623242 FOXD4L6Q3SYB3 417 aaPredicted RBP6.18□□□□□ -1.42
ATRX-209ENST00000623242 TTBK2Q6IQ55 1244 aa6.18□□□□□ -1.42
ATRX-209ENST00000623242 FOXD4L3Q6VB84 417 aaPredicted RBP6.18□□□□□ -1.42
ATRX-209ENST00000623242 AGMOQ6ZNB7 445 aa6.18□□□□□ -1.42
ATRX-209ENST00000623242 SULF2Q8IWU5 870 aa6.18□□□□□ -1.42
ATRX-209ENST00000623242 GRIN3AQ8TCU5 1115 aa6.18□□□□□ -1.42
ATRX-209ENST00000623242 OSGEPQ9NPF4 335 aa6.18□□□□□ -1.42
ATRX-209ENST00000623242 A0A0A0MRY4 1105 aa6.17□□□□□ -1.42
ATRX-209ENST00000623242 FAM177BA6PVY3 158 aa6.17□□□□□ -1.42
ATRX-209ENST00000623242 MINDY4BA8MYZ0 360 aa6.17□□□□□ -1.42
ATRX-209ENST00000623242 FAM229AH3BQW9 127 aa6.17□□□□□ -1.42
ATRX-209ENST00000623242 ARNTP27540 789 aa6.17□□□□□ -1.42
ATRX-209ENST00000623242 GBP2P32456 591 aaPredicted RBP6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms