RNA–Protein interactions for RNA: ENST00000623056.3

LDB3-209, Transcript of LIM domain binding 3, humanhuman

TSL 5 BASIC

Gene LDB3, Length 2,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-209ENST00000623056 TMEM232C9JQI7 657 aa16.28■□□□□ 0.2
LDB3-209ENST00000623056 ARHGAP6O43182 974 aa16.28■□□□□ 0.2
LDB3-209ENST00000623056 TOP1P11387 765 aaKnown RBP16.28■□□□□ 0.2
LDB3-209ENST00000623056 CMA1P23946 247 aa16.28■□□□□ 0.2
LDB3-209ENST00000623056 CASQ1P31415 396 aa16.28■□□□□ 0.2
LDB3-209ENST00000623056 HSPA2P54652 639 aa16.28■□□□□ 0.2
LDB3-209ENST00000623056 MYL5Q02045 173 aa16.28■□□□□ 0.2
LDB3-209ENST00000623056 PLEKHO1Q53GL0 409 aaPredicted RBP16.28■□□□□ 0.2
LDB3-209ENST00000623056 RSRC2Q7L4I2 434 aaKnown RBP16.28■□□□□ 0.2
LDB3-209ENST00000623056 CHMP4CQ96CF2 233 aa16.28■□□□□ 0.2
LDB3-209ENST00000623056 PXDNQ92626 1479 aa16.28■□□□□ 0.2
LDB3-209ENST00000623056 GNG11P61952 73 aa16.28■□□□□ 0.2
LDB3-209ENST00000623056 NEXNQ0ZGT2 675 aa16.28■□□□□ 0.2
LDB3-209ENST00000623056 PROSER2Q86WR7 435 aaPredicted RBP16.28■□□□□ 0.2
LDB3-209ENST00000623056 FUT8Q9BYC5 575 aa16.28■□□□□ 0.2
LDB3-209ENST00000623056 PARD6BQ9BYG5 372 aa16.28■□□□□ 0.2
LDB3-209ENST00000623056 HELLSQ9NRZ9 838 aa16.28■□□□□ 0.2
LDB3-209ENST00000623056 TUBE1Q9UJT0 475 aa16.28■□□□□ 0.2
LDB3-209ENST00000623056 MRFAP1Q9Y605 127 aa16.28■□□□□ 0.2
LDB3-209ENST00000623056 BRAPQ7Z569 592 aa16.27■□□□□ 0.2
LDB3-209ENST00000623056 PLCD3Q8N3E9 789 aa16.27■□□□□ 0.2
LDB3-209ENST00000623056 CCDC191Q8NCU4 936 aa16.27■□□□□ 0.2
LDB3-209ENST00000623056 LRRC59Q96AG4 307 aaKnown RBP16.27■□□□□ 0.2
LDB3-209ENST00000623056 GPHNQ9NQX3 736 aaPredicted RBP16.27■□□□□ 0.2
LDB3-209ENST00000623056 CCDC9Q9Y3X0 531 aaKnown RBP16.27■□□□□ 0.2
LDB3-209ENST00000623056 GYS2P54840 703 aa16.27■□□□□ 0.19
LDB3-209ENST00000623056 C1orf141Q5JVX7 400 aa16.27■□□□□ 0.19
LDB3-209ENST00000623056 ANO1Q5XXA6 986 aa16.27■□□□□ 0.19
LDB3-209ENST00000623056 SYNE3Q6ZMZ3 975 aa16.27■□□□□ 0.19
LDB3-209ENST00000623056 FBXO18Q8NFZ0 1043 aa16.27■□□□□ 0.19
LDB3-209ENST00000623056 MYD88Q99836 296 aa16.27■□□□□ 0.19
LDB3-209ENST00000623056 PALLDQ8WX93 1383 aa16.26■□□□□ 0.19
LDB3-209ENST00000623056 KIF28PB7ZC32 967 aa16.26■□□□□ 0.19
LDB3-209ENST00000623056 WDHD1O75717 1129 aaPredicted RBP16.26■□□□□ 0.19
LDB3-209ENST00000623056 HSPD1P10809 573 aaKnown RBP16.26■□□□□ 0.19
LDB3-209ENST00000623056 RABGGTAQ92696 567 aa16.26■□□□□ 0.19
LDB3-209ENST00000623056 GOLIM4O00461 696 aa16.25■□□□□ 0.19
LDB3-209ENST00000623056 EXOC4Q96A65 974 aa16.25■□□□□ 0.19
LDB3-209ENST00000623056 KIFC2Q96AC6 838 aa16.25■□□□□ 0.19
LDB3-209ENST00000623056 AK7Q96M32 723 aa16.25■□□□□ 0.19
LDB3-209ENST00000623056 RASSF4Q9H2L5 321 aa16.25■□□□□ 0.19
LDB3-209ENST00000623056 GJB4Q9NTQ9 266 aa16.25■□□□□ 0.19
LDB3-209ENST00000623056 RGPD2P0DJD1 1756 aa16.25■□□□□ 0.19
LDB3-209ENST00000623056 GOLGA6L9A6NEM1 432 aa16.25■□□□□ 0.19
LDB3-209ENST00000623056 SYKP43405 635 aa16.25■□□□□ 0.19
LDB3-209ENST00000623056 ZMYM1Q5SVZ6 1142 aa16.25■□□□□ 0.19
LDB3-209ENST00000623056 INTS13Q9NVM9 706 aa16.25■□□□□ 0.19
LDB3-209ENST00000623056 LCMT1Q9UIC8 334 aa16.25■□□□□ 0.19
LDB3-209ENST00000623056 H3BQF6 201 aa16.24■□□□□ 0.19
LDB3-209ENST00000623056 MARCKSP29966 332 aaPredicted RBP16.24■□□□□ 0.19
LDB3-209ENST00000623056 AMOTQ4VCS5 1084 aa16.24■□□□□ 0.19
LDB3-209ENST00000623056 GOLGA5Q8TBA6 731 aa16.24■□□□□ 0.19
LDB3-209ENST00000623056 GOLGA1Q92805 767 aa16.24■□□□□ 0.19
LDB3-209ENST00000623056 BAG1Q99933 345 aaPredicted RBP16.24■□□□□ 0.19
LDB3-209ENST00000623056 FANCLQ9NW38 375 aa16.24■□□□□ 0.19
LDB3-209ENST00000623056 PAG1Q9NWQ8 432 aa16.24■□□□□ 0.19
LDB3-209ENST00000623056 PSD3Q9NYI0 1048 aa16.24■□□□□ 0.19
LDB3-209ENST00000623056 CWC15Q9P013 229 aaKnown RBP16.24■□□□□ 0.19
LDB3-209ENST00000623056 ADAM21Q9UKJ8 722 aa16.24■□□□□ 0.19
LDB3-209ENST00000623056 OVOS2A0A0G2JMS6 1433 aa16.24■□□□□ 0.19
LDB3-209ENST00000623056 MYO1CO00159 1063 aa16.24■□□□□ 0.19
LDB3-209ENST00000623056 LMAN1P49257 510 aa16.24■□□□□ 0.19
LDB3-209ENST00000623056 KIF23Q02241 960 aaPredicted RBP16.24■□□□□ 0.19
LDB3-209ENST00000623056 PNOCQ13519 176 aa16.24■□□□□ 0.19
LDB3-209ENST00000623056 LONRF2Q1L5Z9 754 aa16.24■□□□□ 0.19
LDB3-209ENST00000623056 TTLL5Q6EMB2 1281 aa16.24■□□□□ 0.19
LDB3-209ENST00000623056 TOGARAM2Q6ZUX3 1019 aa16.24■□□□□ 0.19
LDB3-209ENST00000623056 FBXL16Q8N461 479 aa16.24■□□□□ 0.19
LDB3-209ENST00000623056 FBXO41Q8TF61 875 aa16.24■□□□□ 0.19
LDB3-209ENST00000623056 MYL6BP14649 208 aa16.23■□□□□ 0.19
LDB3-209ENST00000623056 TBX2Q13207 712 aaPredicted RBP16.23■□□□□ 0.19
LDB3-209ENST00000623056 SLC39A14Q15043 492 aa16.23■□□□□ 0.19
LDB3-209ENST00000623056 XAGE3Q8WTP9 111 aa16.23■□□□□ 0.19
LDB3-209ENST00000623056 DHX58Q96C10 678 aa16.23■□□□□ 0.19
LDB3-209ENST00000623056 METTL22Q9BUU2 404 aaPredicted RBP16.23■□□□□ 0.19
LDB3-209ENST00000623056 TRIM66O15016 1216 aa16.23■□□□□ 0.19
LDB3-209ENST00000623056 MYO1BO43795 1136 aa16.23■□□□□ 0.19
LDB3-209ENST00000623056 TXLNAP40222 546 aa16.23■□□□□ 0.19
LDB3-209ENST00000623056 HPSEQ9Y251 543 aa16.23■□□□□ 0.19
LDB3-209ENST00000623056 MAST3O60307 1309 aa16.23■□□□□ 0.19
LDB3-209ENST00000623056 NFAT5O94916 1531 aa16.22■□□□□ 0.19
LDB3-209ENST00000623056 RABL6Q3YEC7 729 aaPredicted RBP16.22■□□□□ 0.19
LDB3-209ENST00000623056 JAKMIP3Q5VZ66 844 aa16.22■□□□□ 0.19
LDB3-209ENST00000623056 OLFM4Q6UX06 510 aa16.22■□□□□ 0.19
LDB3-209ENST00000623056 C10orf67Q8IYJ2 551 aa16.22■□□□□ 0.19
LDB3-209ENST00000623056 PDILTQ8N807 584 aa16.22■□□□□ 0.19
LDB3-209ENST00000623056 RSPH14Q9UHP6 348 aa16.22■□□□□ 0.19
LDB3-209ENST00000623056 HPS5Q9UPZ3 1129 aa16.22■□□□□ 0.19
LDB3-209ENST00000623056 CCDC151A5D8V7 595 aa16.22■□□□□ 0.19
LDB3-209ENST00000623056 MAP2K7O14733 419 aa16.22■□□□□ 0.19
LDB3-209ENST00000623056 STX10O60499 249 aa16.22■□□□□ 0.19
LDB3-209ENST00000623056 SHC4Q6S5L8 630 aa16.22■□□□□ 0.19
LDB3-209ENST00000623056 KLF18A0A0U1RQI7 1052 aa16.21■□□□□ 0.19
LDB3-209ENST00000623056 GOLGA8BA8MQT2 603 aa16.21■□□□□ 0.19
LDB3-209ENST00000623056 DHX16O60231 1041 aaKnown RBP16.21■□□□□ 0.19
LDB3-209ENST00000623056 TNNT3P45378 269 aaPredicted RBP16.21■□□□□ 0.19
LDB3-209ENST00000623056 BRD3Q15059 726 aa16.21■□□□□ 0.19
LDB3-209ENST00000623056 LMOD2Q6P5Q4 547 aa16.21■□□□□ 0.19
LDB3-209ENST00000623056 COPS6Q7L5N1 327 aa16.21■□□□□ 0.19
LDB3-209ENST00000623056 RAB11FIP4Q86YS3 637 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms